RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 NUTM2GQ5VZR2 741 aa26.92■■□□□ 1.9
LINC01220-202ENST00000561000 SIN3AQ96ST3 1273 aa26.92■■□□□ 1.9
LINC01220-202ENST00000561000 SRPK2P78362 688 aaKnown RBP26.91■■□□□ 1.9
LINC01220-202ENST00000561000 PRDM11Q9NQV5 511 aa26.91■■□□□ 1.9
LINC01220-202ENST00000561000 NEUROD1Q13562 356 aa26.9■■□□□ 1.9
LINC01220-202ENST00000561000 CENPJQ9HC77 1338 aaPredicted RBP26.9■■□□□ 1.9
LINC01220-202ENST00000561000 PLEKHG3A1L390 1219 aa26.89■■□□□ 1.9
LINC01220-202ENST00000561000 FAM98CQ17RN3 349 aaKnown RBP26.89■■□□□ 1.9
LINC01220-202ENST00000561000 KRT27Q7Z3Y8 459 aa26.89■■□□□ 1.9
LINC01220-202ENST00000561000 ABCA3Q99758 1704 aa26.88■■□□□ 1.89
LINC01220-202ENST00000561000 ZRANB1Q9UGI0 708 aa26.88■■□□□ 1.89
LINC01220-202ENST00000561000 PLCH1Q4KWH8 1693 aa26.88■■□□□ 1.89
LINC01220-202ENST00000561000 ALS2Q96Q42 1657 aa26.88■■□□□ 1.89
LINC01220-202ENST00000561000 CABP2Q9NPB3 220 aa26.87■■□□□ 1.89
LINC01220-202ENST00000561000 ZC3H6P61129 1189 aaKnown RBP26.86■■□□□ 1.89
LINC01220-202ENST00000561000 CHRNA2Q15822 529 aa26.86■■□□□ 1.89
LINC01220-202ENST00000561000 NWD2Q9ULI1 1742 aa26.86■■□□□ 1.89
LINC01220-202ENST00000561000 KIAA1210Q9ULL0 1709 aa26.86■■□□□ 1.89
LINC01220-202ENST00000561000 POLR3AO14802 1390 aaPredicted RBP26.85■■□□□ 1.89
LINC01220-202ENST00000561000 SF3B2Q13435 895 aaKnown RBP26.85■■□□□ 1.89
LINC01220-202ENST00000561000 ABTB2Q8N961 1025 aa26.84■■□□□ 1.89
LINC01220-202ENST00000561000 BLMP54132 1417 aaPredicted RBP26.83■■□□□ 1.89
LINC01220-202ENST00000561000 KIAA0232Q92628 1395 aa26.83■■□□□ 1.88
LINC01220-202ENST00000561000 DEFB132Q7Z7B7 95 aa26.82■■□□□ 1.88
LINC01220-202ENST00000561000 SPATA31A5Q5VU36 1347 aa26.82■■□□□ 1.88
LINC01220-202ENST00000561000 SPATA31A7Q8IWB4 1347 aa26.82■■□□□ 1.88
LINC01220-202ENST00000561000 STRN4Q9NRL3 753 aa26.81■■□□□ 1.88
LINC01220-202ENST00000561000 ITSN1Q15811 1721 aa26.8■■□□□ 1.88
LINC01220-202ENST00000561000 COL14A1Q05707 1796 aaKnown RBP26.8■■□□□ 1.88
LINC01220-202ENST00000561000 PPIP5K1Q6PFW1 1433 aa26.79■■□□□ 1.88
LINC01220-202ENST00000561000 CABP1Q9NZU7 370 aa26.78■■□□□ 1.88
LINC01220-202ENST00000561000 EP400Q96L91 3159 aa26.77■■□□□ 1.88
LINC01220-202ENST00000561000 BRWD3Q6RI45 1802 aa26.76■■□□□ 1.88
LINC01220-202ENST00000561000 EVA1CP58658 441 aa26.76■■□□□ 1.87
LINC01220-202ENST00000561000 FAM182BQ5T319 152 aa26.75■■□□□ 1.87
LINC01220-202ENST00000561000 NLRP13Q86W25 1043 aa26.75■■□□□ 1.87
LINC01220-202ENST00000561000 NRAPQ86VF7 1730 aa26.75■■□□□ 1.87
LINC01220-202ENST00000561000 ROCK2O75116 1388 aaKnown RBP26.73■■□□□ 1.87
LINC01220-202ENST00000561000 SPATA31A1Q5TZJ5 1347 aa26.73■■□□□ 1.87
LINC01220-202ENST00000561000 EVC2Q86UK5 1308 aa26.73■■□□□ 1.87
LINC01220-202ENST00000561000 USP35Q9P2H5 1018 aa26.73■■□□□ 1.87
LINC01220-202ENST00000561000 TOPAZ1Q8N9V7 1692 aa26.73■■□□□ 1.87
LINC01220-202ENST00000561000 CRYBG1Q9Y4K1 1723 aa26.72■■□□□ 1.87
LINC01220-202ENST00000561000 GCP02774 474 aa26.71■■□□□ 1.87
LINC01220-202ENST00000561000 TRIM26Q12899 539 aaPredicted RBP26.7■■□□□ 1.86
LINC01220-202ENST00000561000 USP19O94966 1318 aa26.69■■□□□ 1.86
LINC01220-202ENST00000561000 BAG6P46379 1132 aa26.69■■□□□ 1.86
LINC01220-202ENST00000561000 NLRP6P59044 892 aa26.69■■□□□ 1.86
LINC01220-202ENST00000561000 ZBTB7CA1YPR0 619 aa26.68■■□□□ 1.86
LINC01220-202ENST00000561000 LARP1Q6PKG0 1096 aaKnown RBP26.67■■□□□ 1.86
LINC01220-202ENST00000561000 PHRF1Q9P1Y6 1649 aaKnown RBP26.66■■□□□ 1.86
LINC01220-202ENST00000561000 BRD4O60885 1362 aaPredicted RBP26.66■■□□□ 1.86
LINC01220-202ENST00000561000 QRICH2Q9H0J4 1663 aa26.66■■□□□ 1.86
LINC01220-202ENST00000561000 CPDO75976 1380 aa26.65■■□□□ 1.86
LINC01220-202ENST00000561000 USP6P35125 1406 aa26.64■■□□□ 1.85
LINC01220-202ENST00000561000 SSH2Q76I76 1423 aa26.64■■□□□ 1.85
LINC01220-202ENST00000561000 TRPM1Q7Z4N2 1603 aa26.62■■□□□ 1.85
LINC01220-202ENST00000561000 EN1Q05925 392 aaPredicted RBP26.62■■□□□ 1.85
LINC01220-202ENST00000561000 CAMTA1Q9Y6Y1 1673 aa26.61■■□□□ 1.85
LINC01220-202ENST00000561000 BARGINQ6ZT62 677 aa26.61■■□□□ 1.85
LINC01220-202ENST00000561000 TCP11L2Q8N4U5 519 aa26.61■■□□□ 1.85
LINC01220-202ENST00000561000 ZNF692Q9BU19 519 aaPredicted RBP26.61■■□□□ 1.85
LINC01220-202ENST00000561000 NRKQ7Z2Y5 1582 aa26.6■■□□□ 1.85
LINC01220-202ENST00000561000 PDE3BQ13370 1112 aa26.6■■□□□ 1.85
LINC01220-202ENST00000561000 FAM196AQ6ZSG2 479 aa26.6■■□□□ 1.85
LINC01220-202ENST00000561000 CARD11Q9BXL7 1154 aa26.59■■□□□ 1.85
LINC01220-202ENST00000561000 THSD7AQ9UPZ6 1657 aa26.57■■□□□ 1.84
LINC01220-202ENST00000561000 TRIM37O94972 964 aa26.57■■□□□ 1.84
LINC01220-202ENST00000561000 TTC21BQ7Z4L5 1316 aa26.57■■□□□ 1.84
LINC01220-202ENST00000561000 PSDA5PKW4 1024 aaPredicted RBP26.55■■□□□ 1.84
LINC01220-202ENST00000561000 THRAP3Q9Y2W1 955 aaKnown RBP26.55■■□□□ 1.84
LINC01220-202ENST00000561000 TONSLQ96HA7 1378 aa26.55■■□□□ 1.84
LINC01220-202ENST00000561000 SOX12O15370 315 aa26.54■■□□□ 1.84
LINC01220-202ENST00000561000 AATKQ6ZMQ8 1374 aa26.52■■□□□ 1.84
LINC01220-202ENST00000561000 SRCAPQ6ZRS2 3230 aa26.51■■□□□ 1.83
LINC01220-202ENST00000561000 COL5A2P05997 1499 aaPredicted RBP26.51■■□□□ 1.83
LINC01220-202ENST00000561000 APBA3O96018 575 aa26.51■■□□□ 1.83
LINC01220-202ENST00000561000 EZH2Q15910 746 aaKnown RBP26.51■■□□□ 1.83
LINC01220-202ENST00000561000 LMO7Q8WWI1 1683 aa26.5■■□□□ 1.83
LINC01220-202ENST00000561000 KTN1Q86UP2 1357 aaKnown RBP26.5■■□□□ 1.83
LINC01220-202ENST00000561000 TTC21AQ8NDW8 1320 aa26.5■■□□□ 1.83
LINC01220-202ENST00000561000 TOM1L2Q6ZVM7 507 aa26.5■■□□□ 1.83
LINC01220-202ENST00000561000 KCNH5Q8NCM2 988 aa26.5■■□□□ 1.83
LINC01220-202ENST00000561000 TMC1Q8TDI8 760 aa26.49■■□□□ 1.83
LINC01220-202ENST00000561000 AXIN2Q9Y2T1 843 aa26.49■■□□□ 1.83
LINC01220-202ENST00000561000 CRB1P82279 1406 aa26.48■■□□□ 1.83
LINC01220-202ENST00000561000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.48■■□□□ 1.83
LINC01220-202ENST00000561000 SLIT3O75094 1523 aa26.48■■□□□ 1.83
LINC01220-202ENST00000561000 ARHGEF25Q86VW2 580 aa26.47■■□□□ 1.83
LINC01220-202ENST00000561000 CAMKK2Q96RR4 588 aa26.47■■□□□ 1.83
LINC01220-202ENST00000561000 CPSF1Q10570 1443 aaKnown RBP26.47■■□□□ 1.83
LINC01220-202ENST00000561000 R3HDM1Q15032 1099 aaKnown RBP26.45■■□□□ 1.82
LINC01220-202ENST00000561000 PCGF6Q9BYE7 350 aa26.45■■□□□ 1.82
LINC01220-202ENST00000561000 DISP2A7MBM2 1401 aa26.45■■□□□ 1.82
LINC01220-202ENST00000561000 RGPD1P0DJD0 1748 aa26.45■■□□□ 1.82
LINC01220-202ENST00000561000 SBNO2Q9Y2G9 1366 aa26.45■■□□□ 1.82
LINC01220-202ENST00000561000 CSB-PGBD3P0DP91 1061 aa26.44■■□□□ 1.82
LINC01220-202ENST00000561000 PIK3C2AO00443 1686 aa26.44■■□□□ 1.82
LINC01220-202ENST00000561000 SLC12A5Q9H2X9 1139 aa26.43■■□□□ 1.82
LINC01220-202ENST00000561000 WDR17Q8IZU2 1322 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms