RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	PUS7	Q96PZ0	661 aa	Known RBP	11.37	□□□□□ -0.59
RNF31-222	ENST00000560631	JCAD	Q9P266	1359 aa		11.37	□□□□□ -0.59
RNF31-222	ENST00000560631	SHPRH	Q149N8	1683 aa		11.36	□□□□□ -0.59
RNF31-222	ENST00000560631	EVC2	Q86UK5	1308 aa		11.36	□□□□□ -0.59
RNF31-222	ENST00000560631	PLEKHG3	A1L390	1219 aa		11.36	□□□□□ -0.59
RNF31-222	ENST00000560631	TESK2	Q96S53	571 aa		11.36	□□□□□ -0.59
RNF31-222	ENST00000560631	CCDC61	Q9Y6R9	512 aa		11.36	□□□□□ -0.59
RNF31-222	ENST00000560631	TOPAZ1	Q8N9V7	1692 aa		11.36	□□□□□ -0.59
RNF31-222	ENST00000560631	FOXO3	O43524	673 aa		11.35	□□□□□ -0.59
RNF31-222	ENST00000560631	DDX17	Q92841	729 aa	Known RBP	11.35	□□□□□ -0.59
RNF31-222	ENST00000560631	PXDN	Q92626	1479 aa		11.35	□□□□□ -0.59
RNF31-222	ENST00000560631	USP47	Q96K76	1375 aa		11.34	□□□□□ -0.59
RNF31-222	ENST00000560631	ST20-MTHFS	A0A0A6YYL1	179 aa		11.34	□□□□□ -0.59
RNF31-222	ENST00000560631	SBNO1	A3KN83	1393 aa		11.33	□□□□□ -0.6
RNF31-222	ENST00000560631	POLR3A	O14802	1390 aa	Predicted RBP	11.33	□□□□□ -0.6
RNF31-222	ENST00000560631	C19orf67	A6NJJ6	358 aa		11.33	□□□□□ -0.6
RNF31-222	ENST00000560631	SRPK2	P78362	688 aa	Known RBP	11.33	□□□□□ -0.6
RNF31-222	ENST00000560631	KRT28	Q7Z3Y7	464 aa		11.33	□□□□□ -0.6
RNF31-222	ENST00000560631	SPATA31A6	Q5VVP1	1343 aa		11.33	□□□□□ -0.6
RNF31-222	ENST00000560631	ATAD2	Q6PL18	1390 aa		11.32	□□□□□ -0.6
RNF31-222	ENST00000560631	PSME1	Q06323	249 aa		11.32	□□□□□ -0.6
RNF31-222	ENST00000560631	PMFBP1	Q8TBY8	1022 aa		11.32	□□□□□ -0.6
RNF31-222	ENST00000560631	CABP2	Q9NPB3	220 aa		11.32	□□□□□ -0.6
RNF31-222	ENST00000560631	SPATA31A3	Q5VYP0	1347 aa		11.32	□□□□□ -0.6
RNF31-222	ENST00000560631	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.32	□□□□□ -0.6
RNF31-222	ENST00000560631	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.31	□□□□□ -0.6
RNF31-222	ENST00000560631	BRD4	O60885	1362 aa	Predicted RBP	11.31	□□□□□ -0.6
RNF31-222	ENST00000560631	PNPLA6	Q8IY17	1366 aa		11.31	□□□□□ -0.6
RNF31-222	ENST00000560631	NGDN	Q8NEJ9	315 aa	Known RBP	11.3	□□□□□ -0.6
RNF31-222	ENST00000560631	ACE	P12821	1306 aa		11.3	□□□□□ -0.6
RNF31-222	ENST00000560631	MED1	Q15648	1581 aa	Predicted RBP	11.29	□□□□□ -0.6
RNF31-222	ENST00000560631	AKAP12	Q02952	1782 aa		11.29	□□□□□ -0.6
RNF31-222	ENST00000560631	PPIP5K1	Q6PFW1	1433 aa		11.29	□□□□□ -0.6
RNF31-222	ENST00000560631	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
RNF31-222	ENST00000560631	ALS2	Q96Q42	1657 aa		11.29	□□□□□ -0.6
RNF31-222	ENST00000560631	TNS3	Q68CZ2	1445 aa		11.28	□□□□□ -0.6
RNF31-222	ENST00000560631	TMF1	P82094	1093 aa		11.28	□□□□□ -0.6
RNF31-222	ENST00000560631	CABP1	Q9NZU7	370 aa		11.28	□□□□□ -0.6
RNF31-222	ENST00000560631	XPC	Q01831	940 aa	Predicted RBP	11.27	□□□□□ -0.61
RNF31-222	ENST00000560631	CDCA8	Q53HL2	280 aa		11.27	□□□□□ -0.61
RNF31-222	ENST00000560631	ARHGEF10	O15013	1369 aa		11.27	□□□□□ -0.61
RNF31-222	ENST00000560631	NINL	Q9Y2I6	1382 aa		11.27	□□□□□ -0.61
RNF31-222	ENST00000560631	CPSF1	Q10570	1443 aa	Known RBP	11.26	□□□□□ -0.61
RNF31-222	ENST00000560631	SSH2	Q76I76	1423 aa		11.26	□□□□□ -0.61
RNF31-222	ENST00000560631	GABBR2	O75899	941 aa		11.26	□□□□□ -0.61
RNF31-222	ENST00000560631	HSPA5	P11021	654 aa	Known RBP	11.26	□□□□□ -0.61
RNF31-222	ENST00000560631	LRP6	O75581	1613 aa		11.25	□□□□□ -0.61
RNF31-222	ENST00000560631	MARF1	Q9Y4F3	1742 aa	Known RBP	11.25	□□□□□ -0.61
RNF31-222	ENST00000560631	DISP3	Q9P2K9	1392 aa		11.25	□□□□□ -0.61
RNF31-222	ENST00000560631	USP6	P35125	1406 aa		11.25	□□□□□ -0.61
RNF31-222	ENST00000560631	MON2	Q7Z3U7	1717 aa		11.24	□□□□□ -0.61
RNF31-222	ENST00000560631	CD163L1	Q9NR16	1453 aa		11.24	□□□□□ -0.61
RNF31-222	ENST00000560631	SLC12A5	Q9H2X9	1139 aa		11.23	□□□□□ -0.61
RNF31-222	ENST00000560631	ABCA3	Q99758	1704 aa		11.23	□□□□□ -0.61
RNF31-222	ENST00000560631	CRYBG1	Q9Y4K1	1723 aa		11.23	□□□□□ -0.61
RNF31-222	ENST00000560631	CHADL	Q6NUI6	762 aa		11.22	□□□□□ -0.61
RNF31-222	ENST00000560631	TTC21A	Q8NDW8	1320 aa		11.22	□□□□□ -0.61
RNF31-222	ENST00000560631	NRK	Q7Z2Y5	1582 aa		11.21	□□□□□ -0.61
RNF31-222	ENST00000560631	TTC21B	Q7Z4L5	1316 aa		11.21	□□□□□ -0.61
RNF31-222	ENST00000560631	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.21	□□□□□ -0.61
RNF31-222	ENST00000560631	NUTM2E	B1AL46	878 aa	Predicted RBP	11.21	□□□□□ -0.61
RNF31-222	ENST00000560631	PAK3	O75914	559 aa	Predicted RBP	11.21	□□□□□ -0.61
RNF31-222	ENST00000560631	LHX8	Q68G74	356 aa		11.21	□□□□□ -0.61
RNF31-222	ENST00000560631	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.21	□□□□□ -0.61
RNF31-222	ENST00000560631	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.21	□□□□□ -0.61
RNF31-222	ENST00000560631	TERF2IP	Q9NYB0	399 aa		11.21	□□□□□ -0.61
RNF31-222	ENST00000560631	EDC4	Q6P2E9	1401 aa	Known RBP	11.2	□□□□□ -0.62
RNF31-222	ENST00000560631	KTN1	Q86UP2	1357 aa	Known RBP	11.2	□□□□□ -0.62
RNF31-222	ENST00000560631	ANKRD36B	Q8N2N9	1353 aa		11.2	□□□□□ -0.62
RNF31-222	ENST00000560631	USP19	O94966	1318 aa		11.2	□□□□□ -0.62
RNF31-222	ENST00000560631	NLRP13	Q86W25	1043 aa		11.2	□□□□□ -0.62
RNF31-222	ENST00000560631	TMC1	Q8TDI8	760 aa		11.2	□□□□□ -0.62
RNF31-222	ENST00000560631	RGS17	Q9UGC6	210 aa	Predicted RBP	11.2	□□□□□ -0.62
RNF31-222	ENST00000560631	MYOM1	P52179	1685 aa		11.2	□□□□□ -0.62
RNF31-222	ENST00000560631	USP54	Q70EL1	1684 aa		11.2	□□□□□ -0.62
RNF31-222	ENST00000560631	PRR29	P0C7W0	189 aa		11.19	□□□□□ -0.62
RNF31-222	ENST00000560631	LMOD2	Q6P5Q4	547 aa		11.19	□□□□□ -0.62
RNF31-222	ENST00000560631	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.19	□□□□□ -0.62
RNF31-222	ENST00000560631	ABTB2	Q8N961	1025 aa		11.19	□□□□□ -0.62
RNF31-222	ENST00000560631		A0A1W2PP64	1363 aa		11.18	□□□□□ -0.62
RNF31-222	ENST00000560631	USP31	Q70CQ4	1352 aa		11.18	□□□□□ -0.62
RNF31-222	ENST00000560631	PIK3C2A	O00443	1686 aa		11.18	□□□□□ -0.62
RNF31-222	ENST00000560631	MEX3C	Q5U5Q3	659 aa	Known RBP	11.18	□□□□□ -0.62
RNF31-222	ENST00000560631	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.17	□□□□□ -0.62
RNF31-222	ENST00000560631	ZEB1	P37275	1124 aa	Predicted RBP	11.17	□□□□□ -0.62
RNF31-222	ENST00000560631	ZNF772	Q68DY9	489 aa	Predicted RBP	11.17	□□□□□ -0.62
RNF31-222	ENST00000560631	CABLES1	Q8TDN4	633 aa		11.17	□□□□□ -0.62
RNF31-222	ENST00000560631	NWD2	Q9ULI1	1742 aa		11.17	□□□□□ -0.62
RNF31-222	ENST00000560631	AFF2	P51816	1311 aa		11.16	□□□□□ -0.62
RNF31-222	ENST00000560631	SLIT3	O75094	1523 aa		11.16	□□□□□ -0.62
RNF31-222	ENST00000560631	SLIT2	O94813	1529 aa		11.16	□□□□□ -0.62
RNF31-222	ENST00000560631	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.16	□□□□□ -0.62
RNF31-222	ENST00000560631	C11orf95	C9JLR9	678 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF31-222	ENST00000560631	ADAMTS2	O95450	1211 aa		11.16	□□□□□ -0.62
RNF31-222	ENST00000560631	NLRP6	P59044	892 aa		11.16	□□□□□ -0.62
RNF31-222	ENST00000560631	NGLY1	Q96IV0	654 aa		11.16	□□□□□ -0.62
RNF31-222	ENST00000560631	GC	P02774	474 aa		11.15	□□□□□ -0.62
RNF31-222	ENST00000560631	HAP1	P54257	671 aa	Predicted RBP	11.15	□□□□□ -0.62
RNF31-222	ENST00000560631	C8orf37	Q96NL8	207 aa		11.15	□□□□□ -0.62
RNF31-222	ENST00000560631	COL14A1	Q05707	1796 aa	Known RBP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 83 ms