RNA–Protein interactions for RNA: ENST00000560607.5

SNX22-204, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 1,182 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-204ENST00000560607 NRAPQ86VF7 1730 aa23.76■■□□□ 1.39
SNX22-204ENST00000560607 RGL3Q3MIN7 710 aa23.76■■□□□ 1.39
SNX22-204ENST00000560607 RREB1Q92766 1687 aa23.74■■□□□ 1.39
SNX22-204ENST00000560607 SBNO1A3KN83 1393 aa23.74■■□□□ 1.39
SNX22-204ENST00000560607 THSD7AQ9UPZ6 1657 aa23.73■■□□□ 1.39
SNX22-204ENST00000560607 NUP188Q5SRE5 1749 aa23.73■■□□□ 1.39
SNX22-204ENST00000560607 PHF8Q9UPP1 1060 aa23.73■■□□□ 1.39
SNX22-204ENST00000560607 STK26Q9P289 416 aa23.72■■□□□ 1.39
SNX22-204ENST00000560607 ABCA3Q99758 1704 aa23.72■■□□□ 1.39
SNX22-204ENST00000560607 CEP350Q5VT06 3117 aa23.67■■□□□ 1.38
SNX22-204ENST00000560607 RPGRIP1LQ68CZ1 1315 aa23.67■■□□□ 1.38
SNX22-204ENST00000560607 GIGYF1O75420 1035 aaPredicted RBP23.67■■□□□ 1.38
SNX22-204ENST00000560607 FMN2Q9NZ56 1722 aa23.67■■□□□ 1.38
SNX22-204ENST00000560607 COL14A1Q05707 1796 aaKnown RBP23.66■■□□□ 1.38
SNX22-204ENST00000560607 PDE3BQ13370 1112 aa23.65■■□□□ 1.38
SNX22-204ENST00000560607 DCAF11Q8TEB1 546 aa23.65■■□□□ 1.38
SNX22-204ENST00000560607 L3MBTL2Q969R5 705 aa23.65■■□□□ 1.38
SNX22-204ENST00000560607 TIMELESSQ9UNS1 1208 aa23.65■■□□□ 1.38
SNX22-204ENST00000560607 PLEKHH1Q9ULM0 1364 aa23.65■■□□□ 1.38
SNX22-204ENST00000560607 SPATA31A1Q5TZJ5 1347 aa23.64■■□□□ 1.38
SNX22-204ENST00000560607 NRKQ7Z2Y5 1582 aa23.63■■□□□ 1.37
SNX22-204ENST00000560607 KDM2AQ9Y2K7 1162 aa23.63■■□□□ 1.37
SNX22-204ENST00000560607 TECPR2O15040 1411 aa23.62■■□□□ 1.37
SNX22-204ENST00000560607 CHD4Q14839 1912 aa23.61■■□□□ 1.37
SNX22-204ENST00000560607 SYT17Q9BSW7 474 aa23.61■■□□□ 1.37
SNX22-204ENST00000560607 NRXN1Q9ULB1 1477 aa23.61■■□□□ 1.37
SNX22-204ENST00000560607 ZBTB7AO95365 584 aa23.6■■□□□ 1.37
SNX22-204ENST00000560607 ZEB1P37275 1124 aaPredicted RBP23.59■■□□□ 1.37
SNX22-204ENST00000560607 FHDC1Q9C0D6 1143 aaPredicted RBP23.59■■□□□ 1.37
SNX22-204ENST00000560607 PRDM11Q9NQV5 511 aa23.59■■□□□ 1.37
SNX22-204ENST00000560607 ABCC11Q96J66 1382 aa23.58■■□□□ 1.37
SNX22-204ENST00000560607 PTGER2P43116 358 aa23.58■■□□□ 1.37
SNX22-204ENST00000560607 PMFBP1Q8TBY8 1022 aa23.56■■□□□ 1.36
SNX22-204ENST00000560607 STAC3Q96MF2 364 aa23.56■■□□□ 1.36
SNX22-204ENST00000560607 PDGFDQ9GZP0 370 aaPredicted RBP23.56■■□□□ 1.36
SNX22-204ENST00000560607 STRN4Q9NRL3 753 aa23.56■■□□□ 1.36
SNX22-204ENST00000560607 USP35Q9P2H5 1018 aa23.56■■□□□ 1.36
SNX22-204ENST00000560607 ATF5Q9Y2D1 282 aaPredicted RBP23.56■■□□□ 1.36
SNX22-204ENST00000560607 KIAA1210Q9ULL0 1709 aa23.56■■□□□ 1.36
SNX22-204ENST00000560607 RGPD8O14715 1765 aaPredicted RBP23.55■■□□□ 1.36
SNX22-204ENST00000560607 MYOM1P52179 1685 aa23.54■■□□□ 1.36
SNX22-204ENST00000560607 TMEM132EQ6IEE7 984 aa23.54■■□□□ 1.36
SNX22-204ENST00000560607 ANO8Q9HCE9 1232 aaPredicted RBP23.54■■□□□ 1.36
SNX22-204ENST00000560607 TRPM1Q7Z4N2 1603 aa23.54■■□□□ 1.36
SNX22-204ENST00000560607 BARGINQ6ZT62 677 aa23.52■■□□□ 1.36
SNX22-204ENST00000560607 ADGRF5Q8IZF2 1346 aa23.52■■□□□ 1.36
SNX22-204ENST00000560607 CASZ1Q86V15 1759 aa23.52■■□□□ 1.36
SNX22-204ENST00000560607 PIK3C2GO75747 1445 aa23.5■■□□□ 1.35
SNX22-204ENST00000560607 PLSCR1O15162 318 aa23.49■■□□□ 1.35
SNX22-204ENST00000560607 CHRNA2Q15822 529 aa23.48■■□□□ 1.35
SNX22-204ENST00000560607 BCL11BQ9C0K0 894 aaPredicted RBP23.48■■□□□ 1.35
SNX22-204ENST00000560607 GPRASP1Q5JY77 1395 aa23.48■■□□□ 1.35
SNX22-204ENST00000560607 C11orf95C9JLR9 678 aaPredicted RBP23.47■■□□□ 1.35
SNX22-204ENST00000560607 EVA1CP58658 441 aa23.47■■□□□ 1.35
SNX22-204ENST00000560607 SIRT1Q96EB6 747 aa23.47■■□□□ 1.35
SNX22-204ENST00000560607 KNDC1Q76NI1 1749 aa23.46■■□□□ 1.35
SNX22-204ENST00000560607 KIAA0232Q92628 1395 aa23.45■■□□□ 1.34
SNX22-204ENST00000560607 GPR162Q16538 588 aa23.45■■□□□ 1.34
SNX22-204ENST00000560607 DLC1Q96QB1 1528 aa23.44■■□□□ 1.34
SNX22-204ENST00000560607 YTHDC2Q9H6S0 1430 aaKnown RBP23.44■■□□□ 1.34
SNX22-204ENST00000560607 TRPM3Q9HCF6 1732 aaPredicted RBP23.44■■□□□ 1.34
SNX22-204ENST00000560607 TCP11L2Q8N4U5 519 aa23.43■■□□□ 1.34
SNX22-204ENST00000560607 ALS2Q96Q42 1657 aa23.43■■□□□ 1.34
SNX22-204ENST00000560607 PAK3O75914 559 aaPredicted RBP23.42■■□□□ 1.34
SNX22-204ENST00000560607 MTFR1LQ9H019 292 aa23.42■■□□□ 1.34
SNX22-204ENST00000560607 SAFB2Q14151 953 aaKnown RBP eCLIP23.4■■□□□ 1.34
SNX22-204ENST00000560607 ANKARQ7Z5J8 1434 aa23.4■■□□□ 1.34
SNX22-204ENST00000560607 ZC3H6P61129 1189 aaKnown RBP23.39■■□□□ 1.33
SNX22-204ENST00000560607 CFAP70Q5T0N1 1121 aa23.39■■□□□ 1.33
SNX22-204ENST00000560607 ARXQ96QS3 562 aa23.39■■□□□ 1.33
SNX22-204ENST00000560607 SGIP1Q9BQI5 828 aa23.39■■□□□ 1.33
SNX22-204ENST00000560607 STK32BQ9NY57 414 aa23.39■■□□□ 1.33
SNX22-204ENST00000560607 SSH2Q76I76 1423 aa23.39■■□□□ 1.33
SNX22-204ENST00000560607 RGPD3A6NKT7 1758 aaPredicted RBP23.38■■□□□ 1.33
SNX22-204ENST00000560607 RGPD4Q7Z3J3 1758 aa23.38■■□□□ 1.33
SNX22-204ENST00000560607 LARP1Q6PKG0 1096 aaKnown RBP23.38■■□□□ 1.33
SNX22-204ENST00000560607 PROM2Q8N271 834 aa23.38■■□□□ 1.33
SNX22-204ENST00000560607 ROCK2O75116 1388 aaKnown RBP23.38■■□□□ 1.33
SNX22-204ENST00000560607 C14orf93Q9H972 538 aaKnown RBP23.37■■□□□ 1.33
SNX22-204ENST00000560607 CRYBG1Q9Y4K1 1723 aa23.36■■□□□ 1.33
SNX22-204ENST00000560607 THRAP3Q9Y2W1 955 aaKnown RBP23.36■■□□□ 1.33
SNX22-204ENST00000560607 OVOS2A0A0G2JMS6 1433 aa23.35■■□□□ 1.33
SNX22-204ENST00000560607 OVOS2A0A0J9YW53 1432 aa23.35■■□□□ 1.33
SNX22-204ENST00000560607 OVOS2Q6IE36 1432 aa23.35■■□□□ 1.33
SNX22-204ENST00000560607 SLC15A2Q16348 729 aa23.35■■□□□ 1.33
SNX22-204ENST00000560607 PRAM1Q96QH2 718 aa23.35■■□□□ 1.33
SNX22-204ENST00000560607 MAP3K5Q99683 1374 aa23.35■■□□□ 1.33
SNX22-204ENST00000560607 ADGRB1O14514 1584 aa23.33■■□□□ 1.33
SNX22-204ENST00000560607 NGDNQ8NEJ9 315 aaKnown RBP23.33■■□□□ 1.33
SNX22-204ENST00000560607 HSPA6P17066 643 aa23.32■■□□□ 1.32
SNX22-204ENST00000560607 NBPF1Q3BBV0 1214 aa23.32■■□□□ 1.32
SNX22-204ENST00000560607 ARHGEF28Q8N1W1 1705 aaKnown RBP23.31■■□□□ 1.32
SNX22-204ENST00000560607 PTF1AQ7RTS3 328 aa23.31■■□□□ 1.32
SNX22-204ENST00000560607 PELP1Q8IZL8 1130 aaKnown RBP23.31■■□□□ 1.32
SNX22-204ENST00000560607 SHANK3Q9BYB0 1731 aa23.3■■□□□ 1.32
SNX22-204ENST00000560607 CARD11Q9BXL7 1154 aa23.3■■□□□ 1.32
SNX22-204ENST00000560607 POGKQ9P215 609 aa23.3■■□□□ 1.32
SNX22-204ENST00000560607 TXNRD1Q16881 649 aa23.28■■□□□ 1.32
SNX22-204ENST00000560607 PARP4Q9UKK3 1724 aaKnown RBP23.26■■□□□ 1.31
SNX22-204ENST00000560607 NUTM2GQ5VZR2 741 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms