RNA–Protein interactions for RNA: ENST00000560289.5

MINDY2-205, Transcript of MINDY lysine 48 deubiquitinase 2, humanhuman

TSL 1 (best)

Gene MINDY2, Length 1,859 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY2-205ENST00000560289 NCOA3Q9Y6Q9 1424 aa33.27■■■□□ 2.92
MINDY2-205ENST00000560289 PHF8Q9UPP1 1060 aa33.27■■■□□ 2.92
MINDY2-205ENST00000560289 ZNF335Q9H4Z2 1342 aaPredicted RBP33.25■■■□□ 2.91
MINDY2-205ENST00000560289 ADAMTS8Q9UP79 889 aa33.25■■■□□ 2.91
MINDY2-205ENST00000560289 ESCO1Q5FWF5 840 aa33.23■■■□□ 2.91
MINDY2-205ENST00000560289 WDR43Q15061 677 aaKnown RBP eCLIP33.22■■■□□ 2.91
MINDY2-205ENST00000560289 COG3Q96JB2 828 aa33.22■■■□□ 2.91
MINDY2-205ENST00000560289 INSRP06213 1382 aa33.21■■■□□ 2.91
MINDY2-205ENST00000560289 FBLN1P23142 703 aa33.2■■■□□ 2.91
MINDY2-205ENST00000560289 TTC21AQ8NDW8 1320 aa33.2■■■□□ 2.91
MINDY2-205ENST00000560289 SCAF1Q9H7N4 1312 aaKnown RBP33.2■■■□□ 2.91
MINDY2-205ENST00000560289 ORAI2Q96SN7 254 aa33.19■■■□□ 2.9
MINDY2-205ENST00000560289 ZBED9Q6R2W3 1325 aa33.19■■■□□ 2.9
MINDY2-205ENST00000560289 DMRT2Q9Y5R5 561 aa33.18■■■□□ 2.9
MINDY2-205ENST00000560289 SENP3-EIF4A1A0A087X0R7 540 aa33.18■■■□□ 2.9
MINDY2-205ENST00000560289 BLMP54132 1417 aaPredicted RBP33.18■■■□□ 2.9
MINDY2-205ENST00000560289 ATF3P18847 181 aa33.17■■■□□ 2.9
MINDY2-205ENST00000560289 CFAP53Q96M91 514 aa33.17■■■□□ 2.9
MINDY2-205ENST00000560289 C1orf167Q5SNV9 1468 aa33.17■■■□□ 2.9
MINDY2-205ENST00000560289 DCCP43146 1447 aa33.17■■■□□ 2.9
MINDY2-205ENST00000560289 LRRC7Q96NW7 1537 aa33.16■■■□□ 2.9
MINDY2-205ENST00000560289 OVOS2A0A0J9YW53 1432 aa33.15■■■□□ 2.9
MINDY2-205ENST00000560289 OVOS2Q6IE36 1432 aa33.15■■■□□ 2.9
MINDY2-205ENST00000560289 XIRP1Q702N8 1843 aaKnown RBP33.15■■■□□ 2.9
MINDY2-205ENST00000560289 POLKQ9UBT6 870 aa33.14■■■□□ 2.9
MINDY2-205ENST00000560289 MST1RQ04912 1400 aa33.13■■■□□ 2.89
MINDY2-205ENST00000560289 SHPRHQ149N8 1683 aa33.13■■■□□ 2.89
MINDY2-205ENST00000560289 AATKQ6ZMQ8 1374 aa33.12■■■□□ 2.89
MINDY2-205ENST00000560289 MSH6P52701 1360 aa33.12■■■□□ 2.89
MINDY2-205ENST00000560289 CADPS2Q86UW7 1296 aa33.1■■■□□ 2.89
MINDY2-205ENST00000560289 COL3A1P02461 1466 aaPredicted RBP33.09■■■□□ 2.89
MINDY2-205ENST00000560289 USP31Q70CQ4 1352 aa33.09■■■□□ 2.89
MINDY2-205ENST00000560289 PSME1Q06323 249 aa33.09■■■□□ 2.89
MINDY2-205ENST00000560289 PIK3C2AO00443 1686 aa33.09■■■□□ 2.89
MINDY2-205ENST00000560289 PNPLA6Q8IY17 1366 aa33.08■■■□□ 2.89
MINDY2-205ENST00000560289 EMILIN1Q9Y6C2 1016 aa33.08■■■□□ 2.89
MINDY2-205ENST00000560289 MAP2P11137 1827 aaKnown RBP33.07■■■□□ 2.88
MINDY2-205ENST00000560289 FOXO3O43524 673 aa33.07■■■□□ 2.88
MINDY2-205ENST00000560289 PAK3O75914 559 aaPredicted RBP33.07■■■□□ 2.88
MINDY2-205ENST00000560289 SMG6Q86US8 1419 aaKnown RBP33.05■■■□□ 2.88
MINDY2-205ENST00000560289 PPM1GO15355 546 aaPredicted RBP33.05■■■□□ 2.88
MINDY2-205ENST00000560289 RRS1Q15050 365 aaKnown RBP33.05■■■□□ 2.88
MINDY2-205ENST00000560289 NLRP6P59044 892 aa33.03■■■□□ 2.88
MINDY2-205ENST00000560289 CCDC146Q8IYE0 955 aa33.03■■■□□ 2.88
MINDY2-205ENST00000560289 ABTB2Q8N961 1025 aa33.03■■■□□ 2.88
MINDY2-205ENST00000560289 KIF1AQ12756 1690 aa33.02■■■□□ 2.88
MINDY2-205ENST00000560289 NUTM2GQ5VZR2 741 aa33.01■■■□□ 2.88
MINDY2-205ENST00000560289 XPCQ01831 940 aaPredicted RBP33.01■■■□□ 2.87
MINDY2-205ENST00000560289 SALL2Q9Y467 1007 aaPredicted RBP33■■■□□ 2.87
MINDY2-205ENST00000560289 DIAPH1O60610 1272 aaKnown RBP32.99■■■□□ 2.87
MINDY2-205ENST00000560289 CDK12Q9NYV4 1490 aaPredicted RBP32.98■■■□□ 2.87
MINDY2-205ENST00000560289 SOX12O15370 315 aa32.97■■■□□ 2.87
MINDY2-205ENST00000560289 NUDCQ9Y266 331 aa32.97■■■□□ 2.87
MINDY2-205ENST00000560289 MARF1Q9Y4F3 1742 aaKnown RBP32.97■■■□□ 2.87
MINDY2-205ENST00000560289 U2AF1L5P0DN76 240 aaPredicted RBP32.96■■■□□ 2.87
MINDY2-205ENST00000560289 U2AF1Q01081 240 aaKnown RBP eCLIP32.96■■■□□ 2.87
MINDY2-205ENST00000560289 KRT28Q7Z3Y7 464 aa32.96■■■□□ 2.87
MINDY2-205ENST00000560289 USP54Q70EL1 1684 aa32.96■■■□□ 2.87
MINDY2-205ENST00000560289 U2SURPO15042 1029 aaKnown RBP32.94■■■□□ 2.86
MINDY2-205ENST00000560289 APAF1O14727 1248 aa32.91■■■□□ 2.86
MINDY2-205ENST00000560289 DDX17Q92841 729 aaKnown RBP32.91■■■□□ 2.86
MINDY2-205ENST00000560289 TRPM3Q9HCF6 1732 aaPredicted RBP32.91■■■□□ 2.86
MINDY2-205ENST00000560289 MAP3K19Q56UN5 1328 aa32.9■■■□□ 2.86
MINDY2-205ENST00000560289 IL13P35225 146 aa32.89■■■□□ 2.86
MINDY2-205ENST00000560289 RUNDC1Q96C34 613 aa32.89■■■□□ 2.86
MINDY2-205ENST00000560289 SLAIN2Q9P270 581 aa32.89■■■□□ 2.86
MINDY2-205ENST00000560289 PEAK1Q9H792 1746 aa32.89■■■□□ 2.86
MINDY2-205ENST00000560289 BRINP3Q76B58 766 aa32.87■■■□□ 2.85
MINDY2-205ENST00000560289 NPHP3Q7Z494 1330 aa32.85■■■□□ 2.85
MINDY2-205ENST00000560289 HSP90AB2PQ58FF8 381 aa32.83■■■□□ 2.85
MINDY2-205ENST00000560289 LMOD2Q6P5Q4 547 aa32.82■■■□□ 2.85
MINDY2-205ENST00000560289 PLEKHF1Q96S99 279 aa32.82■■■□□ 2.85
MINDY2-205ENST00000560289 SBNO1A3KN83 1393 aa32.82■■■□□ 2.84
MINDY2-205ENST00000560289 LTBP4Q8N2S1 1624 aa32.81■■■□□ 2.84
MINDY2-205ENST00000560289 TCP11L2Q8N4U5 519 aa32.81■■■□□ 2.84
MINDY2-205ENST00000560289 GTF3C3Q9Y5Q9 886 aa32.81■■■□□ 2.84
MINDY2-205ENST00000560289 PDE3BQ13370 1112 aa32.8■■■□□ 2.84
MINDY2-205ENST00000560289 EIF4A2Q14240 407 aaKnown RBP32.8■■■□□ 2.84
MINDY2-205ENST00000560289 ZNF521Q96K83 1311 aa32.8■■■□□ 2.84
MINDY2-205ENST00000560289 IQSEC2Q5JU85 1478 aa32.8■■■□□ 2.84
MINDY2-205ENST00000560289 FLT4P35916 1363 aa32.79■■■□□ 2.84
MINDY2-205ENST00000560289 PXDNQ92626 1479 aa32.79■■■□□ 2.84
MINDY2-205ENST00000560289 AMPHP49418 695 aa32.79■■■□□ 2.84
MINDY2-205ENST00000560289 CDCA7LQ96GN5 454 aa32.78■■■□□ 2.84
MINDY2-205ENST00000560289 NFAT5O94916 1531 aa32.78■■■□□ 2.84
MINDY2-205ENST00000560289 ALS2Q96Q42 1657 aa32.78■■■□□ 2.84
MINDY2-205ENST00000560289 FCHSD2O94868 740 aa32.77■■■□□ 2.84
MINDY2-205ENST00000560289 USP19O94966 1318 aa32.76■■■□□ 2.84
MINDY2-205ENST00000560289 NGEFQ8N5V2 710 aa32.76■■■□□ 2.84
MINDY2-205ENST00000560289 KCNH5Q8NCM2 988 aa32.76■■■□□ 2.84
MINDY2-205ENST00000560289 RSPH6AQ9H0K4 717 aa32.76■■■□□ 2.84
MINDY2-205ENST00000560289 RRP7AQ9Y3A4 280 aaKnown RBP32.76■■■□□ 2.83
MINDY2-205ENST00000560289 SLIT3O75094 1523 aa32.75■■■□□ 2.83
MINDY2-205ENST00000560289 KIF24Q5T7B8 1368 aa32.74■■■□□ 2.83
MINDY2-205ENST00000560289 HMOX1P09601 288 aa32.74■■■□□ 2.83
MINDY2-205ENST00000560289 PLEKHG5O94827 1062 aa32.74■■■□□ 2.83
MINDY2-205ENST00000560289 GCP02774 474 aa32.74■■■□□ 2.83
MINDY2-205ENST00000560289 HOXC9P31274 260 aa32.74■■■□□ 2.83
MINDY2-205ENST00000560289 PNNQ9H307 717 aaKnown RBP32.73■■■□□ 2.83
MINDY2-205ENST00000560289 NEUROD2Q15784 382 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms