RNA–Protein interactions for RNA: ENST00000560080.1

RNF111-209, Transcript of ring finger protein 111, humanhuman

TSL 3

Gene RNF111, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-209ENST00000560080 IRF7Q92985 503 aa12.36□□□□□ -0.43
RNF111-209ENST00000560080 CTHP32929 405 aa12.35□□□□□ -0.43
RNF111-209ENST00000560080 LCE2CQ5TA81 110 aa12.35□□□□□ -0.43
RNF111-209ENST00000560080 TLL2Q9Y6L7 1015 aa12.35□□□□□ -0.43
RNF111-209ENST00000560080 NNTQ13423 1086 aa12.34□□□□□ -0.43
RNF111-209ENST00000560080 FAM174AQ8TBP5 190 aa12.33□□□□□ -0.44
RNF111-209ENST00000560080 TBC1D2Q9BYX2 928 aa12.33□□□□□ -0.44
RNF111-209ENST00000560080 SCARF1Q14162 830 aa12.32□□□□□ -0.44
RNF111-209ENST00000560080 ZFP42Q96MM3 310 aa12.32□□□□□ -0.44
RNF111-209ENST00000560080 RSBN1LQ6PCB5 846 aaPredicted RBP12.31□□□□□ -0.44
RNF111-209ENST00000560080 LYPD8Q6UX82 237 aa12.31□□□□□ -0.44
RNF111-209ENST00000560080 ZC3H15Q8WU90 426 aaKnown RBP12.31□□□□□ -0.44
RNF111-209ENST00000560080 ADH1CP00326 375 aa12.3□□□□□ -0.44
RNF111-209ENST00000560080 ZBTB3Q9H5J0 574 aa12.3□□□□□ -0.44
RNF111-209ENST00000560080 WDR4P57081 412 aaKnown RBP12.28□□□□□ -0.44
RNF111-209ENST00000560080 MRPL14Q6P1L8 145 aaKnown RBP12.28□□□□□ -0.44
RNF111-209ENST00000560080 H3BM21 787 aa12.27□□□□□ -0.45
RNF111-209ENST00000560080 SPTLC1O15269 473 aa12.27□□□□□ -0.45
RNF111-209ENST00000560080 GMPRP36959 345 aa12.27□□□□□ -0.45
RNF111-209ENST00000560080 PRPF38BQ5VTL8 546 aaKnown RBP12.26□□□□□ -0.45
RNF111-209ENST00000560080 TIMP2P16035 220 aa12.25□□□□□ -0.45
RNF111-209ENST00000560080 ZSCAN1Q8NBB4 408 aa12.25□□□□□ -0.45
RNF111-209ENST00000560080 CFAP99D6REC4 459 aa12.24□□□□□ -0.45
RNF111-209ENST00000560080 HRCP23327 699 aa12.24□□□□□ -0.45
RNF111-209ENST00000560080 VEGFBP49765 207 aa12.24□□□□□ -0.45
RNF111-209ENST00000560080 ARID5BQ14865 1188 aa12.24□□□□□ -0.45
RNF111-209ENST00000560080 AGERQ15109 404 aa12.24□□□□□ -0.45
RNF111-209ENST00000560080 RIC3Q7Z5B4 369 aa12.24□□□□□ -0.45
RNF111-209ENST00000560080 PARP9Q8IXQ6 854 aa12.24□□□□□ -0.45
RNF111-209ENST00000560080 CDK15Q96Q40 435 aa12.24□□□□□ -0.45
RNF111-209ENST00000560080 PURBQ96QR8 312 aaKnown RBP12.24□□□□□ -0.45
RNF111-209ENST00000560080 PCDHB15Q9Y5E8 787 aa12.24□□□□□ -0.45
RNF111-209ENST00000560080 NR5A1Q13285 461 aa12.22□□□□□ -0.45
RNF111-209ENST00000560080 BPHLQ86WA6 291 aaPredicted RBP12.22□□□□□ -0.45
RNF111-209ENST00000560080 MAP10Q9P2G4 905 aa12.22□□□□□ -0.45
RNF111-209ENST00000560080 TRIM66O15016 1216 aa12.21□□□□□ -0.45
RNF111-209ENST00000560080 F12P00748 615 aaPredicted RBP12.21□□□□□ -0.45
RNF111-209ENST00000560080 FOXJ1Q92949 421 aa12.21□□□□□ -0.45
RNF111-209ENST00000560080 AK7Q96M32 723 aa12.21□□□□□ -0.45
RNF111-209ENST00000560080 ARMC2Q8NEN0 867 aa12.2□□□□□ -0.46
RNF111-209ENST00000560080 KLF16Q9BXK1 252 aaPredicted RBP12.19□□□□□ -0.46
RNF111-209ENST00000560080 NUTM2BA6NNL0 878 aaPredicted RBP12.18□□□□□ -0.46
RNF111-209ENST00000560080 NUTM2EB1AL46 878 aaPredicted RBP12.18□□□□□ -0.46
RNF111-209ENST00000560080 UPP2O95045 317 aa12.18□□□□□ -0.46
RNF111-209ENST00000560080 ZIC2O95409 532 aaPredicted RBP12.18□□□□□ -0.46
RNF111-209ENST00000560080 CSPP1Q1MSJ5 1256 aa12.18□□□□□ -0.46
RNF111-209ENST00000560080 NUTM2DQ5VT03 806 aaPredicted RBP12.18□□□□□ -0.46
RNF111-209ENST00000560080 NUTM2AQ8IVF1 878 aaPredicted RBP12.18□□□□□ -0.46
RNF111-209ENST00000560080 TSC1Q92574 1164 aa12.18□□□□□ -0.46
RNF111-209ENST00000560080 CABLES1Q8TDN4 633 aa12.17□□□□□ -0.46
RNF111-209ENST00000560080 ERBB4Q15303 1308 aa12.16□□□□□ -0.46
RNF111-209ENST00000560080 MAN1A2O60476 641 aa12.15□□□□□ -0.46
RNF111-209ENST00000560080 ITPKCQ96DU7 683 aa12.14□□□□□ -0.47
RNF111-209ENST00000560080 ZFAND3Q9H8U3 227 aa12.14□□□□□ -0.47
RNF111-209ENST00000560080 TUSC1Q2TAM9 212 aa12.13□□□□□ -0.47
RNF111-209ENST00000560080 C6orf118Q5T5N4 469 aa12.13□□□□□ -0.47
RNF111-209ENST00000560080 NBPF14Q5TI25 921 aa12.13□□□□□ -0.47
RNF111-209ENST00000560080 HELBQ8NG08 1087 aaPredicted RBP12.13□□□□□ -0.47
RNF111-209ENST00000560080 PER1O15534 1290 aaPredicted RBP12.12□□□□□ -0.47
RNF111-209ENST00000560080 GRM5P41594 1212 aa12.12□□□□□ -0.47
RNF111-209ENST00000560080 SOBPA7XYQ1 873 aa12.11□□□□□ -0.47
RNF111-209ENST00000560080 NR3C2P08235 984 aa12.11□□□□□ -0.47
RNF111-209ENST00000560080 VSIG8P0DPA2 414 aa12.11□□□□□ -0.47
RNF111-209ENST00000560080 BMP2P12643 396 aa12.11□□□□□ -0.47
RNF111-209ENST00000560080 LORP23490 312 aaPredicted RBP12.11□□□□□ -0.47
RNF111-209ENST00000560080 C4orf48Q5BLP8 95 aa12.11□□□□□ -0.47
RNF111-209ENST00000560080 MYSM1Q5VVJ2 828 aa12.1□□□□□ -0.47
RNF111-209ENST00000560080 LIMD1Q9UGP4 676 aa12.09□□□□□ -0.47
RNF111-209ENST00000560080 LILRB3O75022 631 aa12.08□□□□□ -0.48
RNF111-209ENST00000560080 QPCTQ16769 361 aa12.08□□□□□ -0.48
RNF111-209ENST00000560080 LINC00528Q8N1L1 170 aa12.08□□□□□ -0.48
RNF111-209ENST00000560080 MAP4K5Q9Y4K4 846 aa12.08□□□□□ -0.48
RNF111-209ENST00000560080 PDE4DQ08499 809 aa12.07□□□□□ -0.48
RNF111-209ENST00000560080 VASH1Q7L8A9 365 aaPredicted RBP12.07□□□□□ -0.48
RNF111-209ENST00000560080 MEIOBQ8N635 442 aa12.07□□□□□ -0.48
RNF111-209ENST00000560080 C1QTNF2Q9BXJ5 285 aa12.07□□□□□ -0.48
RNF111-209ENST00000560080 FSHRP23945 695 aa12.06□□□□□ -0.48
RNF111-209ENST00000560080 SH3RF1Q7Z6J0 888 aa12.06□□□□□ -0.48
RNF111-209ENST00000560080 EMILIN1Q9Y6C2 1016 aa12.06□□□□□ -0.48
RNF111-209ENST00000560080 MAGEB6P1A0A0J9YX57 407 aa12.05□□□□□ -0.48
RNF111-209ENST00000560080 TRMT44Q8IYL2 757 aaKnown RBP12.05□□□□□ -0.48
RNF111-209ENST00000560080 GPKOWQ92917 476 aaPredicted RBP eCLIP12.05□□□□□ -0.48
RNF111-209ENST00000560080 TSEN34Q9BSV6 310 aaKnown RBP12.05□□□□□ -0.48
RNF111-209ENST00000560080 RSPH6AQ9H0K4 717 aa12.05□□□□□ -0.48
RNF111-209ENST00000560080 PPFIA3O75145 1194 aa12.02□□□□□ -0.49
RNF111-209ENST00000560080 CLK2P49760 499 aaKnown RBP12.02□□□□□ -0.49
RNF111-209ENST00000560080 SH3BP5LQ7L8J4 393 aa12.02□□□□□ -0.49
RNF111-209ENST00000560080 CCDC116Q8IYX3 515 aa12.02□□□□□ -0.49
RNF111-209ENST00000560080 SOS2Q07890 1332 aaPredicted RBP12.01□□□□□ -0.49
RNF111-209ENST00000560080 RTL5Q5HYW3 569 aaPredicted RBP12□□□□□ -0.49
RNF111-209ENST00000560080 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.99□□□□□ -0.49
RNF111-209ENST00000560080 CARD14Q9BXL6 1004 aa11.99□□□□□ -0.49
RNF111-209ENST00000560080 PGPEP1Q9NXJ5 209 aa11.99□□□□□ -0.49
RNF111-209ENST00000560080 DNMT3LQ9UJW3 386 aa11.98□□□□□ -0.49
RNF111-209ENST00000560080 TTLL8A6PVC2 850 aa11.96□□□□□ -0.49
RNF111-209ENST00000560080 CDV3Q9UKY7 258 aaKnown RBP11.96□□□□□ -0.49
RNF111-209ENST00000560080 ERFEQ4G0M1 354 aa11.95□□□□□ -0.5
RNF111-209ENST00000560080 PDXDC2PQ6P474 469 aa11.95□□□□□ -0.5
RNF111-209ENST00000560080 POLR3EQ9NVU0 708 aa11.95□□□□□ -0.5
RNF111-209ENST00000560080 ARHGAP9Q9BRR9 750 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms