RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 HAP1P54257 671 aaPredicted RBP16.35■□□□□ 0.21
HERC1-204ENST00000559715 ITSN1Q15811 1721 aa16.35■□□□□ 0.21
HERC1-204ENST00000559715 STAC3Q96MF2 364 aa16.34■□□□□ 0.21
HERC1-204ENST00000559715 PHRF1Q9P1Y6 1649 aaKnown RBP16.34■□□□□ 0.21
HERC1-204ENST00000559715 FAM98CQ17RN3 349 aaKnown RBP16.33■□□□□ 0.2
HERC1-204ENST00000559715 SPATA31A5Q5VU36 1347 aa16.33■□□□□ 0.2
HERC1-204ENST00000559715 SPATA31A7Q8IWB4 1347 aa16.33■□□□□ 0.2
HERC1-204ENST00000559715 GPRASP1Q5JY77 1395 aa16.33■□□□□ 0.2
HERC1-204ENST00000559715 EIF3AQ14152 1382 aaKnown RBP16.32■□□□□ 0.2
HERC1-204ENST00000559715 TNS1Q9HBL0 1735 aaKnown RBP16.32■□□□□ 0.2
HERC1-204ENST00000559715 KIAA1210Q9ULL0 1709 aa16.32■□□□□ 0.2
HERC1-204ENST00000559715 NUDT16Q96DE0 195 aaKnown RBP16.31■□□□□ 0.2
HERC1-204ENST00000559715 CCDC9Q9Y3X0 531 aaKnown RBP16.31■□□□□ 0.2
HERC1-204ENST00000559715 LRP5O75197 1615 aa16.3■□□□□ 0.2
HERC1-204ENST00000559715 POLR3AO14802 1390 aaPredicted RBP16.3■□□□□ 0.2
HERC1-204ENST00000559715 FAM182BQ5T319 152 aa16.3■□□□□ 0.2
HERC1-204ENST00000559715 RGPD1P0DJD0 1748 aa16.3■□□□□ 0.2
HERC1-204ENST00000559715 NGDNQ8NEJ9 315 aaKnown RBP16.29■□□□□ 0.2
HERC1-204ENST00000559715 CDK19Q9BWU1 502 aa16.28■□□□□ 0.2
HERC1-204ENST00000559715 KIAA0232Q92628 1395 aa16.27■□□□□ 0.2
HERC1-204ENST00000559715 LMO7Q8WWI1 1683 aa16.27■□□□□ 0.19
HERC1-204ENST00000559715 SPATA31A1Q5TZJ5 1347 aa16.26■□□□□ 0.19
HERC1-204ENST00000559715 PLEKHG3A1L390 1219 aa16.26■□□□□ 0.19
HERC1-204ENST00000559715 NBPF1Q3BBV0 1214 aa16.26■□□□□ 0.19
HERC1-204ENST00000559715 DISP2A7MBM2 1401 aa16.26■□□□□ 0.19
HERC1-204ENST00000559715 NRKQ7Z2Y5 1582 aa16.26■□□□□ 0.19
HERC1-204ENST00000559715 ACEP12821 1306 aa16.25■□□□□ 0.19
HERC1-204ENST00000559715 CAMTA1Q9Y6Y1 1673 aa16.25■□□□□ 0.19
HERC1-204ENST00000559715 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
HERC1-204ENST00000559715 CHRNA2Q15822 529 aa16.25■□□□□ 0.19
HERC1-204ENST00000559715 NBPF8Q3BBV2 869 aa16.25■□□□□ 0.19
HERC1-204ENST00000559715 PRDM11Q9NQV5 511 aa16.25■□□□□ 0.19
HERC1-204ENST00000559715 ADRA2BP18089 450 aa16.24■□□□□ 0.19
HERC1-204ENST00000559715 SF3B2Q13435 895 aaKnown RBP16.24■□□□□ 0.19
HERC1-204ENST00000559715 EN1Q05925 392 aaPredicted RBP16.23■□□□□ 0.19
HERC1-204ENST00000559715 CCDC61Q9Y6R9 512 aa16.23■□□□□ 0.19
HERC1-204ENST00000559715 PSDA5PKW4 1024 aaPredicted RBP16.22■□□□□ 0.19
HERC1-204ENST00000559715 BAG6P46379 1132 aa16.22■□□□□ 0.19
HERC1-204ENST00000559715 ZC3H6P61129 1189 aaKnown RBP16.22■□□□□ 0.19
HERC1-204ENST00000559715 NUTM2GQ5VZR2 741 aa16.22■□□□□ 0.19
HERC1-204ENST00000559715 USP19O94966 1318 aa16.21■□□□□ 0.19
HERC1-204ENST00000559715 A0A0G2JS52 829 aa16.2■□□□□ 0.18
HERC1-204ENST00000559715 MYT1Q01538 1121 aa16.2■□□□□ 0.18
HERC1-204ENST00000559715 CAMKK2Q96RR4 588 aa16.2■□□□□ 0.18
HERC1-204ENST00000559715 CPDO75976 1380 aa16.2■□□□□ 0.18
HERC1-204ENST00000559715 SSH2Q76I76 1423 aa16.19■□□□□ 0.18
HERC1-204ENST00000559715 RREB1Q92766 1687 aa16.18■□□□□ 0.18
HERC1-204ENST00000559715 BARGINQ6ZT62 677 aa16.18■□□□□ 0.18
HERC1-204ENST00000559715 COL18A1P39060 1754 aa16.18■□□□□ 0.18
HERC1-204ENST00000559715 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
HERC1-204ENST00000559715 EZH2Q15910 746 aaKnown RBP16.17■□□□□ 0.18
HERC1-204ENST00000559715 LARP1Q6PKG0 1096 aaKnown RBP16.17■□□□□ 0.18
HERC1-204ENST00000559715 STRN4Q9NRL3 753 aa16.17■□□□□ 0.18
HERC1-204ENST00000559715 TRIM37O94972 964 aa16.16■□□□□ 0.18
HERC1-204ENST00000559715 ABTB2Q8N961 1025 aa16.16■□□□□ 0.18
HERC1-204ENST00000559715 PPIP5K1Q6PFW1 1433 aa16.16■□□□□ 0.18
HERC1-204ENST00000559715 NUP188Q5SRE5 1749 aa16.16■□□□□ 0.18
HERC1-204ENST00000559715 PEAK1Q9H792 1746 aa16.16■□□□□ 0.18
HERC1-204ENST00000559715 PARP4Q9UKK3 1724 aaKnown RBP16.16■□□□□ 0.18
HERC1-204ENST00000559715 FAM196AQ6ZSG2 479 aa16.15■□□□□ 0.18
HERC1-204ENST00000559715 COL5A2P05997 1499 aaPredicted RBP16.15■□□□□ 0.18
HERC1-204ENST00000559715 GCP02774 474 aa16.14■□□□□ 0.17
HERC1-204ENST00000559715 R3HDM1Q15032 1099 aaKnown RBP16.14■□□□□ 0.17
HERC1-204ENST00000559715 CABP2Q9NPB3 220 aa16.14■□□□□ 0.17
HERC1-204ENST00000559715 SBF2Q86WG5 1849 aa16.14■□□□□ 0.17
HERC1-204ENST00000559715 PIK3C2AO00443 1686 aa16.14■□□□□ 0.17
HERC1-204ENST00000559715 CENPJQ9HC77 1338 aaPredicted RBP16.14■□□□□ 0.17
HERC1-204ENST00000559715 SLIT3O75094 1523 aa16.14■□□□□ 0.17
HERC1-204ENST00000559715 USP35Q9P2H5 1018 aa16.13■□□□□ 0.17
HERC1-204ENST00000559715 TRPM1Q7Z4N2 1603 aa16.12■□□□□ 0.17
HERC1-204ENST00000559715 USP6P35125 1406 aa16.12■□□□□ 0.17
HERC1-204ENST00000559715 RGPD5Q99666 1765 aa16.11■□□□□ 0.17
HERC1-204ENST00000559715 TCP11L2Q8N4U5 519 aa16.11■□□□□ 0.17
HERC1-204ENST00000559715 L3MBTL2Q969R5 705 aa16.11■□□□□ 0.17
HERC1-204ENST00000559715 BRD4O60885 1362 aaPredicted RBP16.11■□□□□ 0.17
HERC1-204ENST00000559715 NLRP13Q86W25 1043 aa16.1■□□□□ 0.17
HERC1-204ENST00000559715 CABP1Q9NZU7 370 aa16.1■□□□□ 0.17
HERC1-204ENST00000559715 PARD3Q8TEW0 1356 aa16.1■□□□□ 0.17
HERC1-204ENST00000559715 AKAP12Q02952 1782 aa16.1■□□□□ 0.17
HERC1-204ENST00000559715 APBA3O96018 575 aa16.09■□□□□ 0.17
HERC1-204ENST00000559715 EVA1CP58658 441 aa16.09■□□□□ 0.17
HERC1-204ENST00000559715 SRPK2P78362 688 aaKnown RBP16.09■□□□□ 0.17
HERC1-204ENST00000559715 THRAP3Q9Y2W1 955 aaKnown RBP16.09■□□□□ 0.17
HERC1-204ENST00000559715 WNK3Q9BYP7 1800 aa16.09■□□□□ 0.17
HERC1-204ENST00000559715 UTRNP46939 3433 aa16.09■□□□□ 0.17
HERC1-204ENST00000559715 LRRC37A3O60309 1634 aa16.08■□□□□ 0.17
HERC1-204ENST00000559715 AXIN2Q9Y2T1 843 aa16.08■□□□□ 0.16
HERC1-204ENST00000559715 AATKQ6ZMQ8 1374 aa16.08■□□□□ 0.16
HERC1-204ENST00000559715 PDE3BQ13370 1112 aa16.07■□□□□ 0.16
HERC1-204ENST00000559715 CRB1P82279 1406 aa16.07■□□□□ 0.16
HERC1-204ENST00000559715 RGPD3A6NKT7 1758 aaPredicted RBP16.06■□□□□ 0.16
HERC1-204ENST00000559715 RGPD4Q7Z3J3 1758 aa16.06■□□□□ 0.16
HERC1-204ENST00000559715 NLRP6P59044 892 aa16.05■□□□□ 0.16
HERC1-204ENST00000559715 PTF1AQ7RTS3 328 aa16.05■□□□□ 0.16
HERC1-204ENST00000559715 SIN3AQ96ST3 1273 aa16.05■□□□□ 0.16
HERC1-204ENST00000559715 CPSF1Q10570 1443 aaKnown RBP16.03■□□□□ 0.16
HERC1-204ENST00000559715 ARHGEF25Q86VW2 580 aa16.03■□□□□ 0.16
HERC1-204ENST00000559715 NFAT5O94916 1531 aa16.03■□□□□ 0.16
HERC1-204ENST00000559715 TTC21BQ7Z4L5 1316 aa16.01■□□□□ 0.15
HERC1-204ENST00000559715 PROM2Q8N271 834 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms