RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 DDRGK1Q96HY6 314 aa10.53□□□□□ -0.72
CRNDE-207ENST00000559598 NRG2O14511 850 aaPredicted RBP10.52□□□□□ -0.73
CRNDE-207ENST00000559598 MOXD2PA6NHM9 499 aa10.51□□□□□ -0.73
CRNDE-207ENST00000559598 TLL1O43897 1013 aa10.51□□□□□ -0.73
CRNDE-207ENST00000559598 EPRSP07814 1512 aaKnown RBP10.51□□□□□ -0.73
CRNDE-207ENST00000559598 IQGAP2Q13576 1575 aa10.51□□□□□ -0.73
CRNDE-207ENST00000559598 KIF27Q86VH2 1401 aa10.5□□□□□ -0.73
CRNDE-207ENST00000559598 NDUFV2P19404 249 aa10.5□□□□□ -0.73
CRNDE-207ENST00000559598 GUCA2AQ02747 115 aa10.5□□□□□ -0.73
CRNDE-207ENST00000559598 UACAQ9BZF9 1416 aa10.5□□□□□ -0.73
CRNDE-207ENST00000559598 KDM5BQ9UGL1 1544 aa10.49□□□□□ -0.73
CRNDE-207ENST00000559598 PLEKHG3A1L390 1219 aa10.49□□□□□ -0.73
CRNDE-207ENST00000559598 Q3C1V9 767 aa10.49□□□□□ -0.73
CRNDE-207ENST00000559598 THAP11Q96EK4 314 aa10.49□□□□□ -0.73
CRNDE-207ENST00000559598 SALL2Q9Y467 1007 aaPredicted RBP10.49□□□□□ -0.73
CRNDE-207ENST00000559598 COL17A1Q9UMD9 1497 aaPredicted RBP10.49□□□□□ -0.73
CRNDE-207ENST00000559598 ZCCHC11Q5TAX3 1644 aaKnown RBP10.48□□□□□ -0.73
CRNDE-207ENST00000559598 FMNL1O95466 1100 aaPredicted RBP10.48□□□□□ -0.73
CRNDE-207ENST00000559598 FDX1P10109 184 aa10.48□□□□□ -0.73
CRNDE-207ENST00000559598 MYSM1Q5VVJ2 828 aa10.48□□□□□ -0.73
CRNDE-207ENST00000559598 RSPH6AQ9H0K4 717 aa10.48□□□□□ -0.73
CRNDE-207ENST00000559598 IGF1RP08069 1367 aa10.48□□□□□ -0.73
CRNDE-207ENST00000559598 RNF223E7ERA6 249 aa10.47□□□□□ -0.73
CRNDE-207ENST00000559598 ADH1BP00325 375 aa10.47□□□□□ -0.73
CRNDE-207ENST00000559598 GJA5P36382 358 aa10.47□□□□□ -0.73
CRNDE-207ENST00000559598 RSBN1LQ6PCB5 846 aaPredicted RBP10.47□□□□□ -0.73
CRNDE-207ENST00000559598 BRICD5Q6PL45 260 aa10.47□□□□□ -0.73
CRNDE-207ENST00000559598 RNF19BQ6ZMZ0 732 aa10.47□□□□□ -0.73
CRNDE-207ENST00000559598 FBXO41Q8TF61 875 aa10.47□□□□□ -0.73
CRNDE-207ENST00000559598 SPSB2Q99619 263 aa10.47□□□□□ -0.73
CRNDE-207ENST00000559598 PCDHGC3Q9UN70 934 aa10.47□□□□□ -0.73
CRNDE-207ENST00000559598 CFAP43Q8NDM7 1665 aa10.47□□□□□ -0.73
CRNDE-207ENST00000559598 SPTLC1O15269 473 aa10.46□□□□□ -0.73
CRNDE-207ENST00000559598 TRAF7Q6Q0C0 670 aa10.46□□□□□ -0.73
CRNDE-207ENST00000559598 RIC3Q7Z5B4 369 aa10.46□□□□□ -0.73
CRNDE-207ENST00000559598 ANKLE1Q8NAG6 615 aa10.46□□□□□ -0.73
CRNDE-207ENST00000559598 PDZRN3Q9UPQ7 1066 aa10.46□□□□□ -0.73
CRNDE-207ENST00000559598 SLC19A1P41440 591 aa10.45□□□□□ -0.74
CRNDE-207ENST00000559598 IL27Q8NEV9 243 aa10.45□□□□□ -0.74
CRNDE-207ENST00000559598 WDR7Q9Y4E6 1490 aa10.44□□□□□ -0.74
CRNDE-207ENST00000559598 DISP1Q96F81 1524 aa10.43□□□□□ -0.74
CRNDE-207ENST00000559598 CARMIL1Q5VZK9 1371 aa10.43□□□□□ -0.74
CRNDE-207ENST00000559598 S1PR4O95977 384 aa10.43□□□□□ -0.74
CRNDE-207ENST00000559598 SH3D19Q5HYK7 790 aa10.43□□□□□ -0.74
CRNDE-207ENST00000559598 MAGI3Q5TCQ9 1506 aa10.43□□□□□ -0.74
CRNDE-207ENST00000559598 CLK2P49760 499 aaKnown RBP10.42□□□□□ -0.74
CRNDE-207ENST00000559598 SYMPKQ92797 1274 aaKnown RBP10.42□□□□□ -0.74
CRNDE-207ENST00000559598 USB1Q9BQ65 265 aaKnown RBP10.42□□□□□ -0.74
CRNDE-207ENST00000559598 SLC6A16Q9GZN6 736 aa10.42□□□□□ -0.74
CRNDE-207ENST00000559598 LIMD1Q9UGP4 676 aa10.42□□□□□ -0.74
CRNDE-207ENST00000559598 KIAA0556O60303 1618 aa10.42□□□□□ -0.74
CRNDE-207ENST00000559598 UGGT2Q9NYU1 1516 aa10.42□□□□□ -0.74
CRNDE-207ENST00000559598 KIF21BO75037 1637 aa10.41□□□□□ -0.74
CRNDE-207ENST00000559598 C6orf229H3BNL8 230 aa10.41□□□□□ -0.74
CRNDE-207ENST00000559598 SUPT5HO00267 1087 aaKnown RBP10.41□□□□□ -0.74
CRNDE-207ENST00000559598 SKIV2LQ15477 1246 aaKnown RBP10.41□□□□□ -0.74
CRNDE-207ENST00000559598 MSS51Q4VC12 460 aa10.41□□□□□ -0.74
CRNDE-207ENST00000559598 FAM160A2Q8N612 972 aaPredicted RBP10.41□□□□□ -0.74
CRNDE-207ENST00000559598 POLR3EQ9NVU0 708 aa10.41□□□□□ -0.74
CRNDE-207ENST00000559598 PCDHB15Q9Y5E8 787 aa10.41□□□□□ -0.74
CRNDE-207ENST00000559598 TTBK1Q5TCY1 1321 aaPredicted RBP10.4□□□□□ -0.74
CRNDE-207ENST00000559598 MTMR2Q13614 643 aa10.4□□□□□ -0.74
CRNDE-207ENST00000559598 TUSC1Q2TAM9 212 aa10.4□□□□□ -0.74
CRNDE-207ENST00000559598 CSPP1Q1MSJ5 1256 aa10.39□□□□□ -0.75
CRNDE-207ENST00000559598 SPRYD7Q5W111 196 aa10.39□□□□□ -0.75
CRNDE-207ENST00000559598 RETREG3Q86VR2 466 aa10.39□□□□□ -0.75
CRNDE-207ENST00000559598 PRPF38BQ5VTL8 546 aaKnown RBP10.38□□□□□ -0.75
CRNDE-207ENST00000559598 ZNF598Q86UK7 904 aaKnown RBP10.38□□□□□ -0.75
CRNDE-207ENST00000559598 ZBTB3Q9H5J0 574 aa10.38□□□□□ -0.75
CRNDE-207ENST00000559598 GOPCQ9HD26 462 aa10.38□□□□□ -0.75
CRNDE-207ENST00000559598 PRDM9Q9NQV7 894 aa10.38□□□□□ -0.75
CRNDE-207ENST00000559598 SPDYE5A6NIY4 337 aa10.37□□□□□ -0.75
CRNDE-207ENST00000559598 PPEF1O14829 653 aaPredicted RBP10.37□□□□□ -0.75
CRNDE-207ENST00000559598 CD109Q6YHK3 1445 aa10.37□□□□□ -0.75
CRNDE-207ENST00000559598 HRCP23327 699 aa10.36□□□□□ -0.75
CRNDE-207ENST00000559598 QPCTQ16769 361 aa10.36□□□□□ -0.75
CRNDE-207ENST00000559598 ADAMTSL3P82987 1691 aa10.36□□□□□ -0.75
CRNDE-207ENST00000559598 ARAP3Q8WWN8 1544 aa10.36□□□□□ -0.75
CRNDE-207ENST00000559598 CTTNBP2Q8WZ74 1663 aa10.35□□□□□ -0.75
CRNDE-207ENST00000559598 LCE2BO14633 110 aa10.35□□□□□ -0.75
CRNDE-207ENST00000559598 LILRB3O75022 631 aa10.35□□□□□ -0.75
CRNDE-207ENST00000559598 PRR20EP86478 221 aa10.35□□□□□ -0.75
CRNDE-207ENST00000559598 PRR20CP86479 221 aa10.35□□□□□ -0.75
CRNDE-207ENST00000559598 PRR20DP86480 221 aa10.35□□□□□ -0.75
CRNDE-207ENST00000559598 PRR20BP86481 221 aa10.35□□□□□ -0.75
CRNDE-207ENST00000559598 PRR20AP86496 221 aa10.35□□□□□ -0.75
CRNDE-207ENST00000559598 PROCA1Q8NCQ7 364 aaPredicted RBP10.35□□□□□ -0.75
CRNDE-207ENST00000559598 CABLES1Q8TDN4 633 aa10.35□□□□□ -0.75
CRNDE-207ENST00000559598 EMID1Q96A84 441 aaPredicted RBP10.35□□□□□ -0.75
CRNDE-207ENST00000559598 MMP16P51512 607 aa10.34□□□□□ -0.75
CRNDE-207ENST00000559598 PRR7Q8TB68 274 aa10.34□□□□□ -0.75
CRNDE-207ENST00000559598 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.34□□□□□ -0.75
CRNDE-207ENST00000559598 PTPRMP28827 1452 aa10.34□□□□□ -0.75
CRNDE-207ENST00000559598 PCF11O94913 1555 aaKnown RBP10.34□□□□□ -0.75
CRNDE-207ENST00000559598 NUTM2BA6NNL0 878 aaPredicted RBP10.33□□□□□ -0.76
CRNDE-207ENST00000559598 NUTM2EB1AL46 878 aaPredicted RBP10.33□□□□□ -0.76
CRNDE-207ENST00000559598 DXOO77932 396 aaKnown RBP10.33□□□□□ -0.76
CRNDE-207ENST00000559598 ZNF697Q5TEC3 545 aa10.33□□□□□ -0.76
CRNDE-207ENST00000559598 NUTM2DQ5VT03 806 aaPredicted RBP10.33□□□□□ -0.76
CRNDE-207ENST00000559598 LIAT1Q6ZQX7 453 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms