RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 SSH2Q76I76 1423 aa27.38■■□□□ 1.97
SHF-205ENST00000559566 EIF4G2P78344 907 aaKnown RBP eCLIP27.37■■□□□ 1.97
SHF-205ENST00000559566 TMF1P82094 1093 aa27.37■■□□□ 1.97
SHF-205ENST00000559566 TMC1Q8TDI8 760 aa27.35■■□□□ 1.97
SHF-205ENST00000559566 NUTM2GQ5VZR2 741 aa27.34■■□□□ 1.97
SHF-205ENST00000559566 C8orf37Q96NL8 207 aa27.33■■□□□ 1.97
SHF-205ENST00000559566 ABCA3Q99758 1704 aa27.33■■□□□ 1.96
SHF-205ENST00000559566 SLC24A1O60721 1099 aa27.32■■□□□ 1.96
SHF-205ENST00000559566 AKAP12Q02952 1782 aa27.32■■□□□ 1.96
SHF-205ENST00000559566 ILDR2Q71H61 639 aa27.3■■□□□ 1.96
SHF-205ENST00000559566 NRKQ7Z2Y5 1582 aa27.3■■□□□ 1.96
SHF-205ENST00000559566 CRYBG1Q9Y4K1 1723 aa27.3■■□□□ 1.96
SHF-205ENST00000559566 POTEAQ6S8J7 498 aa27.29■■□□□ 1.96
SHF-205ENST00000559566 TTC21BQ7Z4L5 1316 aa27.29■■□□□ 1.96
SHF-205ENST00000559566 A0A1W2PP64 1363 aa27.29■■□□□ 1.96
SHF-205ENST00000559566 KTN1Q86UP2 1357 aaKnown RBP27.29■■□□□ 1.96
SHF-205ENST00000559566 BRD4O60885 1362 aaPredicted RBP27.28■■□□□ 1.96
SHF-205ENST00000559566 AFF2P51816 1311 aa27.28■■□□□ 1.96
SHF-205ENST00000559566 ABTB2Q8N961 1025 aa27.28■■□□□ 1.96
SHF-205ENST00000559566 ZNF692Q9BU19 519 aaPredicted RBP27.28■■□□□ 1.96
SHF-205ENST00000559566 MON2Q7Z3U7 1717 aa27.27■■□□□ 1.96
SHF-205ENST00000559566 C11orf95C9JLR9 678 aaPredicted RBP27.26■■□□□ 1.95
SHF-205ENST00000559566 PIK3C2AO00443 1686 aa27.25■■□□□ 1.95
SHF-205ENST00000559566 NINLQ9Y2I6 1382 aa27.24■■□□□ 1.95
SHF-205ENST00000559566 USP19O94966 1318 aa27.24■■□□□ 1.95
SHF-205ENST00000559566 HAP1P54257 671 aaPredicted RBP27.24■■□□□ 1.95
SHF-205ENST00000559566 NGLY1Q96IV0 654 aa27.24■■□□□ 1.95
SHF-205ENST00000559566 HDGFL2Q7Z4V5 671 aaPredicted RBP27.23■■□□□ 1.95
SHF-205ENST00000559566 PHRF1Q9P1Y6 1649 aaKnown RBP27.23■■□□□ 1.95
SHF-205ENST00000559566 MARF1Q9Y4F3 1742 aaKnown RBP27.22■■□□□ 1.95
SHF-205ENST00000559566 MYOM1P52179 1685 aa27.22■■□□□ 1.95
SHF-205ENST00000559566 CDCA8Q53HL2 280 aa27.22■■□□□ 1.95
SHF-205ENST00000559566 ZRANB1Q9UGI0 708 aa27.22■■□□□ 1.95
SHF-205ENST00000559566 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.21■■□□□ 1.95
SHF-205ENST00000559566 FNBP4Q8N3X1 1017 aaPredicted RBP27.21■■□□□ 1.95
SHF-205ENST00000559566 TERF2IPQ9NYB0 399 aa27.21■■□□□ 1.95
SHF-205ENST00000559566 ANKRD36BQ8N2N9 1353 aa27.21■■□□□ 1.95
SHF-205ENST00000559566 TTC21AQ8NDW8 1320 aa27.19■■□□□ 1.94
SHF-205ENST00000559566 EDC4Q6P2E9 1401 aaKnown RBP27.19■■□□□ 1.94
SHF-205ENST00000559566 FAM83GA6ND36 823 aa27.19■■□□□ 1.94
SHF-205ENST00000559566 NLRP6P59044 892 aa27.19■■□□□ 1.94
SHF-205ENST00000559566 BCL9LQ86UU0 1499 aa27.19■■□□□ 1.94
SHF-205ENST00000559566 SLIT2O94813 1529 aa27.18■■□□□ 1.94
SHF-205ENST00000559566 NLRP13Q86W25 1043 aa27.18■■□□□ 1.94
SHF-205ENST00000559566 NME9Q86XW9 330 aa27.18■■□□□ 1.94
SHF-205ENST00000559566 POLR3GLQ9BT43 218 aa27.18■■□□□ 1.94
SHF-205ENST00000559566 ZNF772Q68DY9 489 aaPredicted RBP27.17■■□□□ 1.94
SHF-205ENST00000559566 SLIT3O75094 1523 aa27.16■■□□□ 1.94
SHF-205ENST00000559566 USP21Q9UK80 565 aa27.16■■□□□ 1.94
SHF-205ENST00000559566 KIAA0232Q92628 1395 aa27.15■■□□□ 1.94
SHF-205ENST00000559566 ZC3H6P61129 1189 aaKnown RBP27.15■■□□□ 1.94
SHF-205ENST00000559566 GCP02774 474 aa27.14■■□□□ 1.94
SHF-205ENST00000559566 CARD14Q9BXL6 1004 aa27.13■■□□□ 1.93
SHF-205ENST00000559566 USP31Q70CQ4 1352 aa27.12■■□□□ 1.93
SHF-205ENST00000559566 CHRNA2Q15822 529 aa27.12■■□□□ 1.93
SHF-205ENST00000559566 ATRNO75882 1429 aa27.11■■□□□ 1.93
SHF-205ENST00000559566 KIF7Q2M1P5 1343 aa27.11■■□□□ 1.93
SHF-205ENST00000559566 PLCH1Q4KWH8 1693 aa27.11■■□□□ 1.93
SHF-205ENST00000559566 QTRT2Q9H974 415 aaKnown RBP27.1■■□□□ 1.93
SHF-205ENST00000559566 PRDM11Q9NQV5 511 aa27.09■■□□□ 1.93
SHF-205ENST00000559566 OVOS2A0A0J9YW53 1432 aa27.08■■□□□ 1.93
SHF-205ENST00000559566 OVOS2Q6IE36 1432 aa27.08■■□□□ 1.93
SHF-205ENST00000559566 COL14A1Q05707 1796 aaKnown RBP27.08■■□□□ 1.93
SHF-205ENST00000559566 UNC5CLQ8IV45 518 aa27.08■■□□□ 1.93
SHF-205ENST00000559566 CPDO75976 1380 aa27.08■■□□□ 1.93
SHF-205ENST00000559566 SOX12O15370 315 aa27.07■■□□□ 1.92
SHF-205ENST00000559566 BTG4Q9NY30 223 aa27.07■■□□□ 1.92
SHF-205ENST00000559566 USP54Q70EL1 1684 aa27.07■■□□□ 1.92
SHF-205ENST00000559566 NFAT5O94916 1531 aa27.06■■□□□ 1.92
SHF-205ENST00000559566 NSD3Q9BZ95 1437 aa27.06■■□□□ 1.92
SHF-205ENST00000559566 NRAPQ86VF7 1730 aa27.05■■□□□ 1.92
SHF-205ENST00000559566 TRPC5Q9UL62 973 aaPredicted RBP27.05■■□□□ 1.92
SHF-205ENST00000559566 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.04■■□□□ 1.92
SHF-205ENST00000559566 FYB1O15117 783 aa27.03■■□□□ 1.92
SHF-205ENST00000559566 NWD2Q9ULI1 1742 aa27.03■■□□□ 1.92
SHF-205ENST00000559566 LMO7Q8WWI1 1683 aa27.02■■□□□ 1.92
SHF-205ENST00000559566 ZBTB7CA1YPR0 619 aa27.02■■□□□ 1.92
SHF-205ENST00000559566 RXRBP28702 533 aa27.02■■□□□ 1.92
SHF-205ENST00000559566 CAMTA1Q9Y6Y1 1673 aa27.01■■□□□ 1.92
SHF-205ENST00000559566 ARHGEF25Q86VW2 580 aa27.01■■□□□ 1.91
SHF-205ENST00000559566 GGNBP2Q9H3C7 697 aa27.01■■□□□ 1.91
SHF-205ENST00000559566 PANK3Q9H999 370 aa27.01■■□□□ 1.91
SHF-205ENST00000559566 CCDC7Q96M83 1385 aa27■■□□□ 1.91
SHF-205ENST00000559566 WASHC2AQ641Q2 1341 aa27■■□□□ 1.91
SHF-205ENST00000559566 RBM6P78332 1123 aaKnown RBP27■■□□□ 1.91
SHF-205ENST00000559566 KCNH5Q8NCM2 988 aa27■■□□□ 1.91
SHF-205ENST00000559566 GLI3P10071 1580 aa26.99■■□□□ 1.91
SHF-205ENST00000559566 FBLN1P23142 703 aa26.98■■□□□ 1.91
SHF-205ENST00000559566 VPS72Q15906 364 aa26.98■■□□□ 1.91
SHF-205ENST00000559566 GJD4Q96KN9 370 aaPredicted RBP26.98■■□□□ 1.91
SHF-205ENST00000559566 RGS12O14924 1447 aa26.98■■□□□ 1.91
SHF-205ENST00000559566 AATKQ6ZMQ8 1374 aa26.97■■□□□ 1.91
SHF-205ENST00000559566 COG3Q96JB2 828 aa26.96■■□□□ 1.91
SHF-205ENST00000559566 AXIN2Q9Y2T1 843 aa26.96■■□□□ 1.91
SHF-205ENST00000559566 COL18A1P39060 1754 aa26.96■■□□□ 1.91
SHF-205ENST00000559566 STRN4Q9NRL3 753 aa26.95■■□□□ 1.9
SHF-205ENST00000559566 COL5A2P05997 1499 aaPredicted RBP26.93■■□□□ 1.9
SHF-205ENST00000559566 CDK12Q9NYV4 1490 aaPredicted RBP26.93■■□□□ 1.9
SHF-205ENST00000559566 KIF20BQ96Q89 1820 aa26.93■■□□□ 1.9
SHF-205ENST00000559566 CCDC9Q9Y3X0 531 aaKnown RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms