RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 HRCP23327 699 aa19.23■□□□□ 0.67
TPM1-220ENST00000559556 WASLO00401 505 aaPredicted RBP19.22■□□□□ 0.67
TPM1-220ENST00000559556 ONECUT3O60422 494 aaPredicted RBP19.22■□□□□ 0.67
TPM1-220ENST00000559556 ZRANB1Q9UGI0 708 aa19.22■□□□□ 0.67
TPM1-220ENST00000559556 KDM2AQ9Y2K7 1162 aa19.22■□□□□ 0.67
TPM1-220ENST00000559556 SEPT12Q8IYM1 358 aa19.21■□□□□ 0.67
TPM1-220ENST00000559556 FAM83GA6ND36 823 aa19.2■□□□□ 0.66
TPM1-220ENST00000559556 PLEKHG5O94827 1062 aa19.2■□□□□ 0.66
TPM1-220ENST00000559556 NRKQ7Z2Y5 1582 aa19.19■□□□□ 0.66
TPM1-220ENST00000559556 LMO7Q8WWI1 1683 aa19.17■□□□□ 0.66
TPM1-220ENST00000559556 CCDC9Q9Y3X0 531 aaKnown RBP19.17■□□□□ 0.66
TPM1-220ENST00000559556 WNK3Q9BYP7 1800 aa19.16■□□□□ 0.66
TPM1-220ENST00000559556 KRT27Q7Z3Y8 459 aa19.15■□□□□ 0.66
TPM1-220ENST00000559556 NGDNQ8NEJ9 315 aaKnown RBP19.15■□□□□ 0.66
TPM1-220ENST00000559556 BTG4Q9NY30 223 aa19.15■□□□□ 0.66
TPM1-220ENST00000559556 SBF2Q86WG5 1849 aa19.14■□□□□ 0.65
TPM1-220ENST00000559556 POLR3AO14802 1390 aaPredicted RBP19.14■□□□□ 0.65
TPM1-220ENST00000559556 TRPM1Q7Z4N2 1603 aa19.14■□□□□ 0.65
TPM1-220ENST00000559556 AKAP12Q02952 1782 aa19.14■□□□□ 0.65
TPM1-220ENST00000559556 RREB1Q92766 1687 aa19.13■□□□□ 0.65
TPM1-220ENST00000559556 PARP4Q9UKK3 1724 aaKnown RBP19.13■□□□□ 0.65
TPM1-220ENST00000559556 RGPD5Q99666 1765 aa19.13■□□□□ 0.65
TPM1-220ENST00000559556 SF3B2Q13435 895 aaKnown RBP19.12■□□□□ 0.65
TPM1-220ENST00000559556 DEFB132Q7Z7B7 95 aa19.12■□□□□ 0.65
TPM1-220ENST00000559556 NUDT16Q96DE0 195 aaKnown RBP19.12■□□□□ 0.65
TPM1-220ENST00000559556 SPATA31A5Q5VU36 1347 aa19.11■□□□□ 0.65
TPM1-220ENST00000559556 SPATA31A7Q8IWB4 1347 aa19.11■□□□□ 0.65
TPM1-220ENST00000559556 FAM98CQ17RN3 349 aaKnown RBP19.11■□□□□ 0.65
TPM1-220ENST00000559556 PAK3O75914 559 aaPredicted RBP19.1■□□□□ 0.65
TPM1-220ENST00000559556 KIAA0232Q92628 1395 aa19.09■□□□□ 0.65
TPM1-220ENST00000559556 PRDM11Q9NQV5 511 aa19.09■□□□□ 0.65
TPM1-220ENST00000559556 NUP188Q5SRE5 1749 aa19.08■□□□□ 0.65
TPM1-220ENST00000559556 A0A0G2JS52 829 aa19.08■□□□□ 0.64
TPM1-220ENST00000559556 MYT1Q01538 1121 aa19.08■□□□□ 0.64
TPM1-220ENST00000559556 PIK3C2AO00443 1686 aa19.08■□□□□ 0.64
TPM1-220ENST00000559556 CDK19Q9BWU1 502 aa19.07■□□□□ 0.64
TPM1-220ENST00000559556 DISP2A7MBM2 1401 aa19.07■□□□□ 0.64
TPM1-220ENST00000559556 COL18A1P39060 1754 aa19.06■□□□□ 0.64
TPM1-220ENST00000559556 CAMTA1Q9Y6Y1 1673 aa19.06■□□□□ 0.64
TPM1-220ENST00000559556 ACEP12821 1306 aa19.05■□□□□ 0.64
TPM1-220ENST00000559556 RGPD3A6NKT7 1758 aaPredicted RBP19.05■□□□□ 0.64
TPM1-220ENST00000559556 RGPD4Q7Z3J3 1758 aa19.05■□□□□ 0.64
TPM1-220ENST00000559556 SPATA31A1Q5TZJ5 1347 aa19.04■□□□□ 0.64
TPM1-220ENST00000559556 BAG6P46379 1132 aa19.04■□□□□ 0.64
TPM1-220ENST00000559556 CCDC61Q9Y6R9 512 aa19.04■□□□□ 0.64
TPM1-220ENST00000559556 PPIP5K1Q6PFW1 1433 aa19.03■□□□□ 0.64
TPM1-220ENST00000559556 SSH2Q76I76 1423 aa19.03■□□□□ 0.64
TPM1-220ENST00000559556 PLEKHG3A1L390 1219 aa19.03■□□□□ 0.64
TPM1-220ENST00000559556 MON2Q7Z3U7 1717 aa19.03■□□□□ 0.64
TPM1-220ENST00000559556 USP19O94966 1318 aa19.02■□□□□ 0.64
TPM1-220ENST00000559556 NBPF1Q3BBV0 1214 aa19.02■□□□□ 0.64
TPM1-220ENST00000559556 NBPF8Q3BBV2 869 aa19.02■□□□□ 0.64
TPM1-220ENST00000559556 CPDO75976 1380 aa19.02■□□□□ 0.64
TPM1-220ENST00000559556 PEAK1Q9H792 1746 aa19.02■□□□□ 0.63
TPM1-220ENST00000559556 SLIT3O75094 1523 aa19.01■□□□□ 0.63
TPM1-220ENST00000559556 LRRC37A3O60309 1634 aa19.01■□□□□ 0.63
TPM1-220ENST00000559556 CHRNA2Q15822 529 aa19.01■□□□□ 0.63
TPM1-220ENST00000559556 CENPJQ9HC77 1338 aaPredicted RBP19■□□□□ 0.63
TPM1-220ENST00000559556 BRD4O60885 1362 aaPredicted RBP18.99■□□□□ 0.63
TPM1-220ENST00000559556 ZC3H6P61129 1189 aaKnown RBP18.99■□□□□ 0.63
TPM1-220ENST00000559556 FAM182BQ5T319 152 aa18.99■□□□□ 0.63
TPM1-220ENST00000559556 NUTM2GQ5VZR2 741 aa18.99■□□□□ 0.63
TPM1-220ENST00000559556 USP54Q70EL1 1684 aa18.98■□□□□ 0.63
TPM1-220ENST00000559556 LTN1O94822 1766 aa18.98■□□□□ 0.63
TPM1-220ENST00000559556 COL5A2P05997 1499 aaPredicted RBP18.97■□□□□ 0.63
TPM1-220ENST00000559556 ABTB2Q8N961 1025 aa18.97■□□□□ 0.63
TPM1-220ENST00000559556 STRN4Q9NRL3 753 aa18.97■□□□□ 0.63
TPM1-220ENST00000559556 USP6P35125 1406 aa18.97■□□□□ 0.63
TPM1-220ENST00000559556 KAT6BQ8WYB5 2073 aa18.97■□□□□ 0.63
TPM1-220ENST00000559556 SRPK2P78362 688 aaKnown RBP18.95■□□□□ 0.62
TPM1-220ENST00000559556 EN1Q05925 392 aaPredicted RBP18.95■□□□□ 0.62
TPM1-220ENST00000559556 BARGINQ6ZT62 677 aa18.95■□□□□ 0.62
TPM1-220ENST00000559556 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
TPM1-220ENST00000559556 PSDA5PKW4 1024 aaPredicted RBP18.93■□□□□ 0.62
TPM1-220ENST00000559556 FAM196AQ6ZSG2 479 aa18.93■□□□□ 0.62
TPM1-220ENST00000559556 NLRP13Q86W25 1043 aa18.92■□□□□ 0.62
TPM1-220ENST00000559556 CABP2Q9NPB3 220 aa18.92■□□□□ 0.62
TPM1-220ENST00000559556 LARP1Q6PKG0 1096 aaKnown RBP18.91■□□□□ 0.62
TPM1-220ENST00000559556 CRB1P82279 1406 aa18.91■□□□□ 0.62
TPM1-220ENST00000559556 GCP02774 474 aa18.9■□□□□ 0.62
TPM1-220ENST00000559556 EVA1CP58658 441 aa18.9■□□□□ 0.62
TPM1-220ENST00000559556 USP35Q9P2H5 1018 aa18.9■□□□□ 0.62
TPM1-220ENST00000559556 TRIM37O94972 964 aa18.89■□□□□ 0.61
TPM1-220ENST00000559556 TCP11L2Q8N4U5 519 aa18.89■□□□□ 0.61
TPM1-220ENST00000559556 CAMKK2Q96RR4 588 aa18.89■□□□□ 0.61
TPM1-220ENST00000559556 THRAP3Q9Y2W1 955 aaKnown RBP18.89■□□□□ 0.61
TPM1-220ENST00000559556 ABCC6O95255 1503 aa18.89■□□□□ 0.61
TPM1-220ENST00000559556 EZH2Q15910 746 aaKnown RBP18.88■□□□□ 0.61
TPM1-220ENST00000559556 L3MBTL2Q969R5 705 aa18.88■□□□□ 0.61
TPM1-220ENST00000559556 AATKQ6ZMQ8 1374 aa18.88■□□□□ 0.61
TPM1-220ENST00000559556 NFAT5O94916 1531 aa18.87■□□□□ 0.61
TPM1-220ENST00000559556 CASZ1Q86V15 1759 aa18.86■□□□□ 0.61
TPM1-220ENST00000559556 EVC2Q86UK5 1308 aa18.86■□□□□ 0.61
TPM1-220ENST00000559556 PDE3BQ13370 1112 aa18.86■□□□□ 0.61
TPM1-220ENST00000559556 R3HDM1Q15032 1099 aaKnown RBP18.86■□□□□ 0.61
TPM1-220ENST00000559556 CABP1Q9NZU7 370 aa18.86■□□□□ 0.61
TPM1-220ENST00000559556 OVOS2A0A0G2JMS6 1433 aa18.85■□□□□ 0.61
TPM1-220ENST00000559556 OVOS2A0A0J9YW53 1432 aa18.85■□□□□ 0.61
TPM1-220ENST00000559556 CPSF1Q10570 1443 aaKnown RBP18.85■□□□□ 0.61
TPM1-220ENST00000559556 OVOS2Q6IE36 1432 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms