RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 KRT76Q01546 638 aa7.87□□□□□ -1.15
CASC4-210ENST00000559550 NNTQ13423 1086 aa7.87□□□□□ -1.15
CASC4-210ENST00000559550 SCARF1Q14162 830 aa7.87□□□□□ -1.15
CASC4-210ENST00000559550 MINK1Q8N4C8 1332 aaPredicted RBP7.86□□□□□ -1.15
CASC4-210ENST00000559550 KRI1Q8N9T8 703 aaKnown RBP7.86□□□□□ -1.15
CASC4-210ENST00000559550 CCDC102AQ96A19 550 aa7.86□□□□□ -1.15
CASC4-210ENST00000559550 PSMG3-AS1Q96PY0 264 aa7.86□□□□□ -1.15
CASC4-210ENST00000559550 RETREG3Q86VR2 466 aa7.85□□□□□ -1.15
CASC4-210ENST00000559550 SLC24A3Q9HC58 644 aa7.85□□□□□ -1.15
CASC4-210ENST00000559550 ADAMTS8Q9UP79 889 aa7.85□□□□□ -1.15
CASC4-210ENST00000559550 WDR4P57081 412 aaKnown RBP7.84□□□□□ -1.15
CASC4-210ENST00000559550 ADH1CP00326 375 aa7.83□□□□□ -1.16
CASC4-210ENST00000559550 UNC93B1Q9H1C4 597 aa7.83□□□□□ -1.16
CASC4-210ENST00000559550 PLEKHG3A1L390 1219 aa7.82□□□□□ -1.16
CASC4-210ENST00000559550 CCNYL3P0C7X3 344 aa7.82□□□□□ -1.16
CASC4-210ENST00000559550 VARSP26640 1264 aaKnown RBP7.82□□□□□ -1.16
CASC4-210ENST00000559550 GPR161Q8N6U8 529 aaKnown RBP7.82□□□□□ -1.16
CASC4-210ENST00000559550 BAP1Q92560 729 aa7.82□□□□□ -1.16
CASC4-210ENST00000559550 RNF225M0QZC1 329 aaPredicted RBP7.81□□□□□ -1.16
CASC4-210ENST00000559550 LINC01559Q495D7 138 aa7.81□□□□□ -1.16
CASC4-210ENST00000559550 EVA1BQ9NVM1 165 aa7.81□□□□□ -1.16
CASC4-210ENST00000559550 ZNF511Q8NB15 262 aa7.8□□□□□ -1.16
CASC4-210ENST00000559550 AK7Q96M32 723 aa7.8□□□□□ -1.16
CASC4-210ENST00000559550 PCDHGC3Q9UN70 934 aa7.8□□□□□ -1.16
CASC4-210ENST00000559550 TRIM66O15016 1216 aa7.79□□□□□ -1.16
CASC4-210ENST00000559550 MS4A1P11836 297 aa7.79□□□□□ -1.16
CASC4-210ENST00000559550 PTPRNQ16849 979 aa7.79□□□□□ -1.16
CASC4-210ENST00000559550 MAN1A2O60476 641 aa7.78□□□□□ -1.16
CASC4-210ENST00000559550 KCNH2Q12809 1159 aa7.78□□□□□ -1.16
CASC4-210ENST00000559550 ZNF385CQ66K41 422 aaPredicted RBP7.78□□□□□ -1.16
CASC4-210ENST00000559550 CNTNAP3BQ96NU0 1288 aa7.78□□□□□ -1.16
CASC4-210ENST00000559550 CNTNAP3Q9BZ76 1288 aa7.78□□□□□ -1.16
CASC4-210ENST00000559550 ZFAND3Q9H8U3 227 aa7.78□□□□□ -1.16
CASC4-210ENST00000559550 DNMT3AQ9Y6K1 912 aaPredicted RBP7.78□□□□□ -1.16
CASC4-210ENST00000559550 MDM2Q00987 491 aaPredicted RBP7.77□□□□□ -1.17
CASC4-210ENST00000559550 CDK15Q96Q40 435 aa7.77□□□□□ -1.17
CASC4-210ENST00000559550 IGHA1P01876 353 aa7.76□□□□□ -1.17
CASC4-210ENST00000559550 C6orf118Q5T5N4 469 aa7.76□□□□□ -1.17
CASC4-210ENST00000559550 GPAT2Q6NUI2 795 aa7.76□□□□□ -1.17
CASC4-210ENST00000559550 ITPKCQ96DU7 683 aa7.76□□□□□ -1.17
CASC4-210ENST00000559550 SOS2Q07890 1332 aaPredicted RBP7.76□□□□□ -1.17
CASC4-210ENST00000559550 ARHGEF15O94989 841 aa7.75□□□□□ -1.17
CASC4-210ENST00000559550 ZIC2O95409 532 aaPredicted RBP7.75□□□□□ -1.17
CASC4-210ENST00000559550 AMHR2Q16671 573 aa7.75□□□□□ -1.17
CASC4-210ENST00000559550 DNMT3LQ9UJW3 386 aa7.75□□□□□ -1.17
CASC4-210ENST00000559550 NR3C2P08235 984 aa7.74□□□□□ -1.17
CASC4-210ENST00000559550 FDX1P10109 184 aa7.73□□□□□ -1.17
CASC4-210ENST00000559550 PDE4DQ08499 809 aa7.73□□□□□ -1.17
CASC4-210ENST00000559550 PARP9Q8IXQ6 854 aa7.73□□□□□ -1.17
CASC4-210ENST00000559550 WHAMMQ8TF30 809 aa7.73□□□□□ -1.17
CASC4-210ENST00000559550 NANOS1Q8WY41 292 aaKnown RBP7.73□□□□□ -1.17
CASC4-210ENST00000559550 COL25A1Q9BXS0 654 aaPredicted RBP7.73□□□□□ -1.17
CASC4-210ENST00000559550 C6orf229H3BNL8 230 aa7.72□□□□□ -1.17
CASC4-210ENST00000559550 RNFT1Q5M7Z0 435 aa7.72□□□□□ -1.17
CASC4-210ENST00000559550 LINC00528Q8N1L1 170 aa7.72□□□□□ -1.17
CASC4-210ENST00000559550 MEIOBQ8N635 442 aa7.72□□□□□ -1.17
CASC4-210ENST00000559550 FAM217BQ9NTX9 383 aaPredicted RBP7.72□□□□□ -1.17
CASC4-210ENST00000559550 CLCN1P35523 988 aa7.71□□□□□ -1.18
CASC4-210ENST00000559550 IRS1P35568 1242 aa7.71□□□□□ -1.18
CASC4-210ENST00000559550 GRM5P41594 1212 aa7.71□□□□□ -1.18
CASC4-210ENST00000559550 TTLL12Q14166 644 aaPredicted RBP7.71□□□□□ -1.18
CASC4-210ENST00000559550 LCE3BQ5TA77 95 aa7.71□□□□□ -1.18
CASC4-210ENST00000559550 FAM174AQ8TBP5 190 aa7.71□□□□□ -1.18
CASC4-210ENST00000559550 GPCPD1Q9NPB8 672 aa7.71□□□□□ -1.18
CASC4-210ENST00000559550 SLURP2P0DP57 97 aa7.7□□□□□ -1.18
CASC4-210ENST00000559550 BMP2P12643 396 aa7.7□□□□□ -1.18
CASC4-210ENST00000559550 FOXK2Q01167 660 aa7.7□□□□□ -1.18
CASC4-210ENST00000559550 NR5A1Q13285 461 aa7.69□□□□□ -1.18
CASC4-210ENST00000559550 DESI1Q6ICB0 168 aa7.69□□□□□ -1.18
CASC4-210ENST00000559550 GIGYF2Q6Y7W6 1299 aaKnown RBP7.69□□□□□ -1.18
CASC4-210ENST00000559550 NUTM1Q86Y26 1132 aa7.69□□□□□ -1.18
CASC4-210ENST00000559550 SVOPQ8N4V2 548 aa7.69□□□□□ -1.18
CASC4-210ENST00000559550 FOXJ1Q92949 421 aa7.69□□□□□ -1.18
CASC4-210ENST00000559550 GPBP1L1Q9HC44 474 aaPredicted RBP7.69□□□□□ -1.18
CASC4-210ENST00000559550 C4orf48Q5BLP8 95 aa7.68□□□□□ -1.18
CASC4-210ENST00000559550 KANK3Q6NY19 840 aa7.68□□□□□ -1.18
CASC4-210ENST00000559550 PRR7Q8TB68 274 aa7.68□□□□□ -1.18
CASC4-210ENST00000559550 PTSQ03393 145 aa7.67□□□□□ -1.18
CASC4-210ENST00000559550 KRTAP9-9Q9BYP9 154 aa7.67□□□□□ -1.18
CASC4-210ENST00000559550 KRTAP9-4Q9BYQ2 154 aa7.67□□□□□ -1.18
CASC4-210ENST00000559550 ADAM23O75077 832 aa7.66□□□□□ -1.18
CASC4-210ENST00000559550 SSTR3P32745 418 aaPredicted RBP7.66□□□□□ -1.18
CASC4-210ENST00000559550 BRPF1P55201 1214 aaPredicted RBP7.66□□□□□ -1.18
CASC4-210ENST00000559550 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.66□□□□□ -1.18
CASC4-210ENST00000559550 NDUFV2P19404 249 aa7.65□□□□□ -1.18
CASC4-210ENST00000559550 ARID5BQ14865 1188 aa7.65□□□□□ -1.18
CASC4-210ENST00000559550 NEUROD2Q15784 382 aa7.65□□□□□ -1.18
CASC4-210ENST00000559550 SPIRE2Q8WWL2 714 aa7.65□□□□□ -1.18
CASC4-210ENST00000559550 KDM4CQ9H3R0 1056 aa7.65□□□□□ -1.18
CASC4-210ENST00000559550 KRTAP4-8A0A0G2JLE6 195 aa7.64□□□□□ -1.19
CASC4-210ENST00000559550 SPTLC1O15269 473 aa7.64□□□□□ -1.19
CASC4-210ENST00000559550 UPP2O95045 317 aa7.64□□□□□ -1.19
CASC4-210ENST00000559550 ITGB2P05107 769 aa7.64□□□□□ -1.19
CASC4-210ENST00000559550 SLC35F4A4IF30 521 aa7.63□□□□□ -1.19
CASC4-210ENST00000559550 MOXD2PA6NHM9 499 aa7.63□□□□□ -1.19
CASC4-210ENST00000559550 F12P00748 615 aaPredicted RBP7.63□□□□□ -1.19
CASC4-210ENST00000559550 LYPD8Q6UX82 237 aa7.63□□□□□ -1.19
CASC4-210ENST00000559550 CCDC155Q8N6L0 562 aa7.63□□□□□ -1.19
CASC4-210ENST00000559550 TTLL8A6PVC2 850 aa7.62□□□□□ -1.19
CASC4-210ENST00000559550 MTMR2Q13614 643 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms