RNA–Protein interactions for RNA: ENST00000559253.1

IPO4-208, Transcript of importin 4, humanhuman

TSL 4

Gene IPO4, Length 579 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-208ENST00000559253 CABP2Q9NPB3 220 aa23.19■■□□□ 1.3
IPO4-208ENST00000559253 SLIT2O94813 1529 aa23.18■■□□□ 1.3
IPO4-208ENST00000559253 BCL9LQ86UU0 1499 aa23.18■■□□□ 1.3
IPO4-208ENST00000559253 SLC24A1O60721 1099 aa23.18■■□□□ 1.3
IPO4-208ENST00000559253 HAP1P54257 671 aaPredicted RBP23.18■■□□□ 1.3
IPO4-208ENST00000559253 ATRNO75882 1429 aa23.17■■□□□ 1.3
IPO4-208ENST00000559253 ATAD2Q6PL18 1390 aa23.16■■□□□ 1.3
IPO4-208ENST00000559253 ABCA3Q99758 1704 aa23.16■■□□□ 1.3
IPO4-208ENST00000559253 PAK3O75914 559 aaPredicted RBP23.15■■□□□ 1.3
IPO4-208ENST00000559253 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.14■■□□□ 1.3
IPO4-208ENST00000559253 UNC5CLQ8IV45 518 aa23.14■■□□□ 1.29
IPO4-208ENST00000559253 CABLES1Q8TDN4 633 aa23.14■■□□□ 1.29
IPO4-208ENST00000559253 PUS7Q96PZ0 661 aaKnown RBP23.14■■□□□ 1.29
IPO4-208ENST00000559253 CABP1Q9NZU7 370 aa23.13■■□□□ 1.29
IPO4-208ENST00000559253 ZNF692Q9BU19 519 aaPredicted RBP23.11■■□□□ 1.29
IPO4-208ENST00000559253 NWD2Q9ULI1 1742 aa23.11■■□□□ 1.29
IPO4-208ENST00000559253 USP6P35125 1406 aa23.1■■□□□ 1.29
IPO4-208ENST00000559253 CRYBG1Q9Y4K1 1723 aa23.1■■□□□ 1.29
IPO4-208ENST00000559253 SSH2Q76I76 1423 aa23.08■■□□□ 1.29
IPO4-208ENST00000559253 RGS12O14924 1447 aa23.08■■□□□ 1.28
IPO4-208ENST00000559253 FAM83GA6ND36 823 aa23.07■■□□□ 1.28
IPO4-208ENST00000559253 ABTB2Q8N961 1025 aa23.07■■□□□ 1.28
IPO4-208ENST00000559253 GJD4Q96KN9 370 aaPredicted RBP23.07■■□□□ 1.28
IPO4-208ENST00000559253 USP19O94966 1318 aa23.07■■□□□ 1.28
IPO4-208ENST00000559253 VPS72Q15906 364 aa23.06■■□□□ 1.28
IPO4-208ENST00000559253 CPSF1Q10570 1443 aaKnown RBP23.06■■□□□ 1.28
IPO4-208ENST00000559253 COL14A1Q05707 1796 aaKnown RBP23.05■■□□□ 1.28
IPO4-208ENST00000559253 NLRP13Q86W25 1043 aa23.05■■□□□ 1.28
IPO4-208ENST00000559253 TESK2Q96S53 571 aa23.05■■□□□ 1.28
IPO4-208ENST00000559253 PLCH1Q4KWH8 1693 aa23.03■■□□□ 1.28
IPO4-208ENST00000559253 ST20-MTHFSA0A0A6YYL1 179 aa23.03■■□□□ 1.28
IPO4-208ENST00000559253 CPDO75976 1380 aa23.02■■□□□ 1.28
IPO4-208ENST00000559253 NINLQ9Y2I6 1382 aa23.02■■□□□ 1.28
IPO4-208ENST00000559253 PHRF1Q9P1Y6 1649 aaKnown RBP23.02■■□□□ 1.28
IPO4-208ENST00000559253 CCER1Q8TC90 406 aaPredicted RBP23.02■■□□□ 1.28
IPO4-208ENST00000559253 PRDM11Q9NQV5 511 aa23.02■■□□□ 1.28
IPO4-208ENST00000559253 TTC21AQ8NDW8 1320 aa23.02■■□□□ 1.28
IPO4-208ENST00000559253 USP47Q96K76 1375 aa23.01■■□□□ 1.27
IPO4-208ENST00000559253 KIAA0232Q92628 1395 aa23■■□□□ 1.27
IPO4-208ENST00000559253 PLEKHG5O94827 1062 aa22.99■■□□□ 1.27
IPO4-208ENST00000559253 BTG4Q9NY30 223 aa22.99■■□□□ 1.27
IPO4-208ENST00000559253 AKAP12Q02952 1782 aa22.99■■□□□ 1.27
IPO4-208ENST00000559253 NRKQ7Z2Y5 1582 aa22.98■■□□□ 1.27
IPO4-208ENST00000559253 ONECUT3O60422 494 aaPredicted RBP22.98■■□□□ 1.27
IPO4-208ENST00000559253 TTC21BQ7Z4L5 1316 aa22.98■■□□□ 1.27
IPO4-208ENST00000559253 KTN1Q86UP2 1357 aaKnown RBP22.98■■□□□ 1.27
IPO4-208ENST00000559253 GLI3P10071 1580 aa22.97■■□□□ 1.27
IPO4-208ENST00000559253 NRAPQ86VF7 1730 aa22.97■■□□□ 1.27
IPO4-208ENST00000559253 GCP02774 474 aa22.97■■□□□ 1.27
IPO4-208ENST00000559253 NUTM2GQ5VZR2 741 aa22.97■■□□□ 1.27
IPO4-208ENST00000559253 NLRP6P59044 892 aa22.96■■□□□ 1.27
IPO4-208ENST00000559253 TERF2IPQ9NYB0 399 aa22.96■■□□□ 1.27
IPO4-208ENST00000559253 SLIT3O75094 1523 aa22.96■■□□□ 1.27
IPO4-208ENST00000559253 UPF1Q92900 1129 aaKnown RBP eCLIP22.95■■□□□ 1.26
IPO4-208ENST00000559253 CD163L1Q9NR16 1453 aa22.95■■□□□ 1.26
IPO4-208ENST00000559253 PIK3C2AO00443 1686 aa22.94■■□□□ 1.26
IPO4-208ENST00000559253 TMF1P82094 1093 aa22.94■■□□□ 1.26
IPO4-208ENST00000559253 HDGFL2Q7Z4V5 671 aaPredicted RBP22.94■■□□□ 1.26
IPO4-208ENST00000559253 MON2Q7Z3U7 1717 aa22.94■■□□□ 1.26
IPO4-208ENST00000559253 CDCA8Q53HL2 280 aa22.93■■□□□ 1.26
IPO4-208ENST00000559253 ZC3H6P61129 1189 aaKnown RBP22.92■■□□□ 1.26
IPO4-208ENST00000559253 KCNH5Q8NCM2 988 aa22.92■■□□□ 1.26
IPO4-208ENST00000559253 TMC1Q8TDI8 760 aa22.92■■□□□ 1.26
IPO4-208ENST00000559253 EDC4Q6P2E9 1401 aaKnown RBP22.91■■□□□ 1.26
IPO4-208ENST00000559253 USP31Q70CQ4 1352 aa22.91■■□□□ 1.26
IPO4-208ENST00000559253 SPATA31A5Q5VU36 1347 aa22.91■■□□□ 1.26
IPO4-208ENST00000559253 SPATA31A7Q8IWB4 1347 aa22.91■■□□□ 1.26
IPO4-208ENST00000559253 SLC12A5Q9H2X9 1139 aa22.91■■□□□ 1.26
IPO4-208ENST00000559253 CCDC9Q9Y3X0 531 aaKnown RBP22.9■■□□□ 1.26
IPO4-208ENST00000559253 AATKQ6ZMQ8 1374 aa22.89■■□□□ 1.26
IPO4-208ENST00000559253 CHRNA2Q15822 529 aa22.89■■□□□ 1.25
IPO4-208ENST00000559253 LMO7Q8WWI1 1683 aa22.89■■□□□ 1.25
IPO4-208ENST00000559253 A0A1W2PP64 1363 aa22.89■■□□□ 1.25
IPO4-208ENST00000559253 USP54Q70EL1 1684 aa22.87■■□□□ 1.25
IPO4-208ENST00000559253 SEPT12Q8IYM1 358 aa22.87■■□□□ 1.25
IPO4-208ENST00000559253 CAMTA1Q9Y6Y1 1673 aa22.86■■□□□ 1.25
IPO4-208ENST00000559253 SPATA31A1Q5TZJ5 1347 aa22.85■■□□□ 1.25
IPO4-208ENST00000559253 CCDC125Q86Z20 511 aa22.85■■□□□ 1.25
IPO4-208ENST00000559253 ANKRD36BQ8N2N9 1353 aa22.85■■□□□ 1.25
IPO4-208ENST00000559253 ABCC6O95255 1503 aa22.84■■□□□ 1.25
IPO4-208ENST00000559253 ARHGEF25Q86VW2 580 aa22.84■■□□□ 1.25
IPO4-208ENST00000559253 EVA1CP58658 441 aa22.83■■□□□ 1.25
IPO4-208ENST00000559253 EP400Q96L91 3159 aa22.83■■□□□ 1.25
IPO4-208ENST00000559253 COL5A2P05997 1499 aaPredicted RBP22.82■■□□□ 1.24
IPO4-208ENST00000559253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.82■■□□□ 1.24
IPO4-208ENST00000559253 THRAP3Q9Y2W1 955 aaKnown RBP22.82■■□□□ 1.24
IPO4-208ENST00000559253 NFAT5O94916 1531 aa22.82■■□□□ 1.24
IPO4-208ENST00000559253 FAM98CQ17RN3 349 aaKnown RBP22.81■■□□□ 1.24
IPO4-208ENST00000559253 BARGINQ6ZT62 677 aa22.81■■□□□ 1.24
IPO4-208ENST00000559253 STRN4Q9NRL3 753 aa22.81■■□□□ 1.24
IPO4-208ENST00000559253 THSD7AQ9UPZ6 1657 aa22.8■■□□□ 1.24
IPO4-208ENST00000559253 EIF4G2P78344 907 aaKnown RBP eCLIP22.79■■□□□ 1.24
IPO4-208ENST00000559253 KRT27Q7Z3Y8 459 aa22.79■■□□□ 1.24
IPO4-208ENST00000559253 NME9Q86XW9 330 aa22.79■■□□□ 1.24
IPO4-208ENST00000559253 OVOS2A0A0J9YW53 1432 aa22.79■■□□□ 1.24
IPO4-208ENST00000559253 OVOS2Q6IE36 1432 aa22.79■■□□□ 1.24
IPO4-208ENST00000559253 CRB1P82279 1406 aa22.77■■□□□ 1.24
IPO4-208ENST00000559253 COL18A1P39060 1754 aa22.77■■□□□ 1.24
IPO4-208ENST00000559253 LARP1Q6PKG0 1096 aaKnown RBP22.77■■□□□ 1.24
IPO4-208ENST00000559253 TCP11L2Q8N4U5 519 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms