RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 CD163L1Q9NR16 1453 aa26.36■■□□□ 1.81
CASC4-209ENST00000559222 PHRF1Q9P1Y6 1649 aaKnown RBP26.36■■□□□ 1.81
CASC4-209ENST00000559222 PAK3O75914 559 aaPredicted RBP26.35■■□□□ 1.81
CASC4-209ENST00000559222 USP6P35125 1406 aa26.35■■□□□ 1.81
CASC4-209ENST00000559222 ARHGEF10O15013 1369 aa26.33■■□□□ 1.81
CASC4-209ENST00000559222 PIK3C2AO00443 1686 aa26.33■■□□□ 1.81
CASC4-209ENST00000559222 MYOM1P52179 1685 aa26.32■■□□□ 1.8
CASC4-209ENST00000559222 CPSF1Q10570 1443 aaKnown RBP26.31■■□□□ 1.8
CASC4-209ENST00000559222 SSH2Q76I76 1423 aa26.31■■□□□ 1.8
CASC4-209ENST00000559222 C8orf37Q96NL8 207 aa26.31■■□□□ 1.8
CASC4-209ENST00000559222 HSPA5P11021 654 aaKnown RBP26.3■■□□□ 1.8
CASC4-209ENST00000559222 NUTM2GQ5VZR2 741 aa26.3■■□□□ 1.8
CASC4-209ENST00000559222 POTEAQ6S8J7 498 aa26.29■■□□□ 1.8
CASC4-209ENST00000559222 SLC12A5Q9H2X9 1139 aa26.29■■□□□ 1.8
CASC4-209ENST00000559222 AFF2P51816 1311 aa26.28■■□□□ 1.8
CASC4-209ENST00000559222 PLCH1Q4KWH8 1693 aa26.28■■□□□ 1.8
CASC4-209ENST00000559222 TMC1Q8TDI8 760 aa26.27■■□□□ 1.8
CASC4-209ENST00000559222 TMF1P82094 1093 aa26.26■■□□□ 1.79
CASC4-209ENST00000559222 A0A1W2PP64 1363 aa26.24■■□□□ 1.79
CASC4-209ENST00000559222 KTN1Q86UP2 1357 aaKnown RBP26.24■■□□□ 1.79
CASC4-209ENST00000559222 EIF4G2P78344 907 aaKnown RBP eCLIP26.24■■□□□ 1.79
CASC4-209ENST00000559222 PUS7Q96PZ0 661 aaKnown RBP26.23■■□□□ 1.79
CASC4-209ENST00000559222 TTC21BQ7Z4L5 1316 aa26.21■■□□□ 1.79
CASC4-209ENST00000559222 HAP1P54257 671 aaPredicted RBP26.21■■□□□ 1.79
CASC4-209ENST00000559222 ABTB2Q8N961 1025 aa26.21■■□□□ 1.79
CASC4-209ENST00000559222 NGLY1Q96IV0 654 aa26.21■■□□□ 1.79
CASC4-209ENST00000559222 BRD4O60885 1362 aaPredicted RBP26.2■■□□□ 1.78
CASC4-209ENST00000559222 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.19■■□□□ 1.78
CASC4-209ENST00000559222 USP19O94966 1318 aa26.18■■□□□ 1.78
CASC4-209ENST00000559222 NRAPQ86VF7 1730 aa26.18■■□□□ 1.78
CASC4-209ENST00000559222 SLIT3O75094 1523 aa26.18■■□□□ 1.78
CASC4-209ENST00000559222 SLIT2O94813 1529 aa26.18■■□□□ 1.78
CASC4-209ENST00000559222 BCL9LQ86UU0 1499 aa26.17■■□□□ 1.78
CASC4-209ENST00000559222 ZNF692Q9BU19 519 aaPredicted RBP26.17■■□□□ 1.78
CASC4-209ENST00000559222 ZRANB1Q9UGI0 708 aa26.17■■□□□ 1.78
CASC4-209ENST00000559222 USP54Q70EL1 1684 aa26.17■■□□□ 1.78
CASC4-209ENST00000559222 COL14A1Q05707 1796 aaKnown RBP26.17■■□□□ 1.78
CASC4-209ENST00000559222 NWD2Q9ULI1 1742 aa26.17■■□□□ 1.78
CASC4-209ENST00000559222 FNBP4Q8N3X1 1017 aaPredicted RBP26.16■■□□□ 1.78
CASC4-209ENST00000559222 NINLQ9Y2I6 1382 aa26.16■■□□□ 1.78
CASC4-209ENST00000559222 C11orf95C9JLR9 678 aaPredicted RBP26.15■■□□□ 1.78
CASC4-209ENST00000559222 SLC24A1O60721 1099 aa26.15■■□□□ 1.78
CASC4-209ENST00000559222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.15■■□□□ 1.78
CASC4-209ENST00000559222 EDC4Q6P2E9 1401 aaKnown RBP26.14■■□□□ 1.78
CASC4-209ENST00000559222 FAM83GA6ND36 823 aa26.14■■□□□ 1.78
CASC4-209ENST00000559222 ZNF772Q68DY9 489 aaPredicted RBP26.14■■□□□ 1.78
CASC4-209ENST00000559222 HDGFL2Q7Z4V5 671 aaPredicted RBP26.14■■□□□ 1.78
CASC4-209ENST00000559222 ANKRD36BQ8N2N9 1353 aa26.13■■□□□ 1.77
CASC4-209ENST00000559222 NME9Q86XW9 330 aa26.13■■□□□ 1.77
CASC4-209ENST00000559222 USP21Q9UK80 565 aa26.13■■□□□ 1.77
CASC4-209ENST00000559222 KIAA0232Q92628 1395 aa26.12■■□□□ 1.77
CASC4-209ENST00000559222 NLRP6P59044 892 aa26.12■■□□□ 1.77
CASC4-209ENST00000559222 ATRNO75882 1429 aa26.12■■□□□ 1.77
CASC4-209ENST00000559222 TTC21AQ8NDW8 1320 aa26.12■■□□□ 1.77
CASC4-209ENST00000559222 ZC3H6P61129 1189 aaKnown RBP26.11■■□□□ 1.77
CASC4-209ENST00000559222 POLR3GLQ9BT43 218 aa26.11■■□□□ 1.77
CASC4-209ENST00000559222 TERF2IPQ9NYB0 399 aa26.11■■□□□ 1.77
CASC4-209ENST00000559222 LMO7Q8WWI1 1683 aa26.1■■□□□ 1.77
CASC4-209ENST00000559222 NLRP13Q86W25 1043 aa26.1■■□□□ 1.77
CASC4-209ENST00000559222 CHRNA2Q15822 529 aa26.09■■□□□ 1.77
CASC4-209ENST00000559222 CDCA8Q53HL2 280 aa26.09■■□□□ 1.77
CASC4-209ENST00000559222 KIF20BQ96Q89 1820 aa26.09■■□□□ 1.77
CASC4-209ENST00000559222 NFAT5O94916 1531 aa26.09■■□□□ 1.77
CASC4-209ENST00000559222 QTRT2Q9H974 415 aaKnown RBP26.08■■□□□ 1.77
CASC4-209ENST00000559222 GLI3P10071 1580 aa26.07■■□□□ 1.76
CASC4-209ENST00000559222 GCP02774 474 aa26.07■■□□□ 1.76
CASC4-209ENST00000559222 COL18A1P39060 1754 aa26.06■■□□□ 1.76
CASC4-209ENST00000559222 PRDM11Q9NQV5 511 aa26.06■■□□□ 1.76
CASC4-209ENST00000559222 USP31Q70CQ4 1352 aa26.06■■□□□ 1.76
CASC4-209ENST00000559222 OVOS2A0A0J9YW53 1432 aa26.05■■□□□ 1.76
CASC4-209ENST00000559222 OVOS2Q6IE36 1432 aa26.05■■□□□ 1.76
CASC4-209ENST00000559222 RGPD5Q99666 1765 aa26.05■■□□□ 1.76
CASC4-209ENST00000559222 SOX12O15370 315 aa26.04■■□□□ 1.76
CASC4-209ENST00000559222 UNC5CLQ8IV45 518 aa26.04■■□□□ 1.76
CASC4-209ENST00000559222 CAMTA1Q9Y6Y1 1673 aa26.03■■□□□ 1.76
CASC4-209ENST00000559222 LTN1O94822 1766 aa26.03■■□□□ 1.76
CASC4-209ENST00000559222 CARD14Q9BXL6 1004 aa26.03■■□□□ 1.76
CASC4-209ENST00000559222 BTG4Q9NY30 223 aa26.03■■□□□ 1.76
CASC4-209ENST00000559222 CPDO75976 1380 aa26.03■■□□□ 1.76
CASC4-209ENST00000559222 TRPC5Q9UL62 973 aaPredicted RBP26.02■■□□□ 1.76
CASC4-209ENST00000559222 RGS12O14924 1447 aa26.02■■□□□ 1.76
CASC4-209ENST00000559222 NSD3Q9BZ95 1437 aa26.02■■□□□ 1.76
CASC4-209ENST00000559222 RXRBP28702 533 aa26.01■■□□□ 1.75
CASC4-209ENST00000559222 KIF7Q2M1P5 1343 aa26.01■■□□□ 1.75
CASC4-209ENST00000559222 ZBTB7CA1YPR0 619 aa26■■□□□ 1.75
CASC4-209ENST00000559222 RBM6P78332 1123 aaKnown RBP25.98■■□□□ 1.75
CASC4-209ENST00000559222 CDK12Q9NYV4 1490 aaPredicted RBP25.96■■□□□ 1.75
CASC4-209ENST00000559222 VPS72Q15906 364 aa25.95■■□□□ 1.74
CASC4-209ENST00000559222 GJD4Q96KN9 370 aaPredicted RBP25.95■■□□□ 1.74
CASC4-209ENST00000559222 GGNBP2Q9H3C7 697 aa25.95■■□□□ 1.74
CASC4-209ENST00000559222 FYB1O15117 783 aa25.94■■□□□ 1.74
CASC4-209ENST00000559222 BRWD3Q6RI45 1802 aa25.93■■□□□ 1.74
CASC4-209ENST00000559222 COL5A2P05997 1499 aaPredicted RBP25.93■■□□□ 1.74
CASC4-209ENST00000559222 FBLN1P23142 703 aa25.93■■□□□ 1.74
CASC4-209ENST00000559222 ARHGEF25Q86VW2 580 aa25.93■■□□□ 1.74
CASC4-209ENST00000559222 STRN4Q9NRL3 753 aa25.93■■□□□ 1.74
CASC4-209ENST00000559222 ANKRD26Q9UPS8 1709 aa25.92■■□□□ 1.74
CASC4-209ENST00000559222 KCNH5Q8NCM2 988 aa25.92■■□□□ 1.74
CASC4-209ENST00000559222 AATKQ6ZMQ8 1374 aa25.92■■□□□ 1.74
CASC4-209ENST00000559222 PANK3Q9H999 370 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms