RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
CLPX-205ENST00000559218 DLC1Q96QB1 1528 aa12.78□□□□□ -0.36
CLPX-205ENST00000559218 ADGRB1O14514 1584 aa12.78□□□□□ -0.36
CLPX-205ENST00000559218 PLCH1Q4KWH8 1693 aa12.78□□□□□ -0.36
CLPX-205ENST00000559218 MINK1Q8N4C8 1332 aaPredicted RBP12.78□□□□□ -0.36
CLPX-205ENST00000559218 ABCA3Q99758 1704 aa12.77□□□□□ -0.36
CLPX-205ENST00000559218 SF3B2Q13435 895 aaKnown RBP12.77□□□□□ -0.37
CLPX-205ENST00000559218 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.37
CLPX-205ENST00000559218 BTG4Q9NY30 223 aa12.77□□□□□ -0.37
CLPX-205ENST00000559218 RAB3GAP2Q9H2M9 1393 aa12.77□□□□□ -0.37
CLPX-205ENST00000559218 A0A0G2JS52 829 aa12.76□□□□□ -0.37
CLPX-205ENST00000559218 MYT1Q01538 1121 aa12.76□□□□□ -0.37
CLPX-205ENST00000559218 NWD2Q9ULI1 1742 aa12.76□□□□□ -0.37
CLPX-205ENST00000559218 ADGRB2O60241 1585 aa12.75□□□□□ -0.37
CLPX-205ENST00000559218 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
CLPX-205ENST00000559218 ACIN1Q9UKV3 1341 aaKnown RBP12.75□□□□□ -0.37
CLPX-205ENST00000559218 KDM2AQ9Y2K7 1162 aa12.75□□□□□ -0.37
CLPX-205ENST00000559218 TRPM3Q9HCF6 1732 aaPredicted RBP12.74□□□□□ -0.37
CLPX-205ENST00000559218 GPRASP1Q5JY77 1395 aa12.74□□□□□ -0.37
CLPX-205ENST00000559218 WASLO00401 505 aaPredicted RBP12.74□□□□□ -0.37
CLPX-205ENST00000559218 FAM182BQ5T319 152 aa12.74□□□□□ -0.37
CLPX-205ENST00000559218 PSDA5PKW4 1024 aaPredicted RBP12.73□□□□□ -0.37
CLPX-205ENST00000559218 DCAF11Q8TEB1 546 aa12.73□□□□□ -0.37
CLPX-205ENST00000559218 TULP4Q9NRJ4 1543 aa12.72□□□□□ -0.37
CLPX-205ENST00000559218 SPATA31A5Q5VU36 1347 aa12.72□□□□□ -0.37
CLPX-205ENST00000559218 SPATA31A7Q8IWB4 1347 aa12.72□□□□□ -0.37
CLPX-205ENST00000559218 NRAPQ86VF7 1730 aa12.72□□□□□ -0.37
CLPX-205ENST00000559218 PAK3O75914 559 aaPredicted RBP12.72□□□□□ -0.37
CLPX-205ENST00000559218 NGDNQ8NEJ9 315 aaKnown RBP12.72□□□□□ -0.37
CLPX-205ENST00000559218 EIF3AQ14152 1382 aaKnown RBP12.71□□□□□ -0.37
CLPX-205ENST00000559218 ALS2Q96Q42 1657 aa12.71□□□□□ -0.37
CLPX-205ENST00000559218 BAG6P46379 1132 aa12.71□□□□□ -0.37
CLPX-205ENST00000559218 EN1Q05925 392 aaPredicted RBP12.7□□□□□ -0.38
CLPX-205ENST00000559218 PRDM11Q9NQV5 511 aa12.7□□□□□ -0.38
CLPX-205ENST00000559218 COL14A1Q05707 1796 aaKnown RBP12.7□□□□□ -0.38
CLPX-205ENST00000559218 HRCP23327 699 aa12.69□□□□□ -0.38
CLPX-205ENST00000559218 NUDT16Q96DE0 195 aaKnown RBP12.69□□□□□ -0.38
CLPX-205ENST00000559218 KIAA0232Q92628 1395 aa12.69□□□□□ -0.38
CLPX-205ENST00000559218 CHRNA2Q15822 529 aa12.68□□□□□ -0.38
CLPX-205ENST00000559218 NUTM2GQ5VZR2 741 aa12.68□□□□□ -0.38
CLPX-205ENST00000559218 ATP7BP35670 1465 aa12.67□□□□□ -0.38
CLPX-205ENST00000559218 CRYBG1Q9Y4K1 1723 aa12.67□□□□□ -0.38
CLPX-205ENST00000559218 LRP5O75197 1615 aa12.66□□□□□ -0.38
CLPX-205ENST00000559218 SPATA31A1Q5TZJ5 1347 aa12.66□□□□□ -0.38
CLPX-205ENST00000559218 ZC3H6P61129 1189 aaKnown RBP12.66□□□□□ -0.38
CLPX-205ENST00000559218 CDK19Q9BWU1 502 aa12.66□□□□□ -0.38
CLPX-205ENST00000559218 STRN4Q9NRL3 753 aa12.66□□□□□ -0.38
CLPX-205ENST00000559218 THSD7AQ9UPZ6 1657 aa12.66□□□□□ -0.38
CLPX-205ENST00000559218 R3HDM1Q15032 1099 aaKnown RBP12.65□□□□□ -0.38
CLPX-205ENST00000559218 STAC3Q96MF2 364 aa12.65□□□□□ -0.38
CLPX-205ENST00000559218 EZH2Q15910 746 aaKnown RBP12.64□□□□□ -0.39
CLPX-205ENST00000559218 USP35Q9P2H5 1018 aa12.64□□□□□ -0.39
CLPX-205ENST00000559218 ACEP12821 1306 aa12.63□□□□□ -0.39
CLPX-205ENST00000559218 ARHGEF28Q8N1W1 1705 aaKnown RBP12.63□□□□□ -0.39
CLPX-205ENST00000559218 TRIM37O94972 964 aa12.63□□□□□ -0.39
CLPX-205ENST00000559218 NBPF8Q3BBV2 869 aa12.63□□□□□ -0.39
CLPX-205ENST00000559218 POLR3AO14802 1390 aaPredicted RBP12.63□□□□□ -0.39
CLPX-205ENST00000559218 DISP2A7MBM2 1401 aa12.62□□□□□ -0.39
CLPX-205ENST00000559218 CAMKK2Q96RR4 588 aa12.62□□□□□ -0.39
CLPX-205ENST00000559218 RGPD1P0DJD0 1748 aa12.62□□□□□ -0.39
CLPX-205ENST00000559218 PLEKHG3A1L390 1219 aa12.61□□□□□ -0.39
CLPX-205ENST00000559218 NBPF1Q3BBV0 1214 aa12.61□□□□□ -0.39
CLPX-205ENST00000559218 LARP1Q6PKG0 1096 aaKnown RBP12.61□□□□□ -0.39
CLPX-205ENST00000559218 FAM196AQ6ZSG2 479 aa12.61□□□□□ -0.39
CLPX-205ENST00000559218 CCDC61Q9Y6R9 512 aa12.61□□□□□ -0.39
CLPX-205ENST00000559218 SSH2Q76I76 1423 aa12.61□□□□□ -0.39
CLPX-205ENST00000559218 TNS1Q9HBL0 1735 aaKnown RBP12.6□□□□□ -0.39
CLPX-205ENST00000559218 PHRF1Q9P1Y6 1649 aaKnown RBP12.6□□□□□ -0.39
CLPX-205ENST00000559218 APBA3O96018 575 aa12.6□□□□□ -0.39
CLPX-205ENST00000559218 EVA1CP58658 441 aa12.6□□□□□ -0.39
CLPX-205ENST00000559218 ABTB2Q8N961 1025 aa12.6□□□□□ -0.39
CLPX-205ENST00000559218 FOXD4L1Q9NU39 408 aa12.6□□□□□ -0.39
CLPX-205ENST00000559218 ITSN1Q15811 1721 aa12.59□□□□□ -0.39
CLPX-205ENST00000559218 CAMTA1Q9Y6Y1 1673 aa12.59□□□□□ -0.39
CLPX-205ENST00000559218 BARGINQ6ZT62 677 aa12.59□□□□□ -0.39
CLPX-205ENST00000559218 USP19O94966 1318 aa12.59□□□□□ -0.39
CLPX-205ENST00000559218 TOPAZ1Q8N9V7 1692 aa12.58□□□□□ -0.4
CLPX-205ENST00000559218 ABCB7O75027 752 aa12.58□□□□□ -0.4
CLPX-205ENST00000559218 NRKQ7Z2Y5 1582 aa12.58□□□□□ -0.4
CLPX-205ENST00000559218 CPDO75976 1380 aa12.57□□□□□ -0.4
CLPX-205ENST00000559218 PDE3BQ13370 1112 aa12.57□□□□□ -0.4
CLPX-205ENST00000559218 TCP11L2Q8N4U5 519 aa12.57□□□□□ -0.4
CLPX-205ENST00000559218 CABP2Q9NPB3 220 aa12.57□□□□□ -0.4
CLPX-205ENST00000559218 PPIP5K1Q6PFW1 1433 aa12.56□□□□□ -0.4
CLPX-205ENST00000559218 SRPK2P78362 688 aaKnown RBP12.56□□□□□ -0.4
CLPX-205ENST00000559218 PARD3Q8TEW0 1356 aa12.56□□□□□ -0.4
CLPX-205ENST00000559218 LMO7Q8WWI1 1683 aa12.55□□□□□ -0.4
CLPX-205ENST00000559218 GCP02774 474 aa12.55□□□□□ -0.4
CLPX-205ENST00000559218 ZBTB7CA1YPR0 619 aa12.54□□□□□ -0.4
CLPX-205ENST00000559218 NLRP13Q86W25 1043 aa12.54□□□□□ -0.4
CLPX-205ENST00000559218 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
CLPX-205ENST00000559218 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
CLPX-205ENST00000559218 KIAA1210Q9ULL0 1709 aa12.52□□□□□ -0.41
CLPX-205ENST00000559218 CABP1Q9NZU7 370 aa12.52□□□□□ -0.41
CLPX-205ENST00000559218 THRAP3Q9Y2W1 955 aaKnown RBP12.52□□□□□ -0.41
CLPX-205ENST00000559218 NLRP6P59044 892 aa12.51□□□□□ -0.41
CLPX-205ENST00000559218 NBPF14Q5TI25 921 aa12.5□□□□□ -0.41
CLPX-205ENST00000559218 PTF1AQ7RTS3 328 aa12.5□□□□□ -0.41
CLPX-205ENST00000559218 USP6P35125 1406 aa12.5□□□□□ -0.41
CLPX-205ENST00000559218 CRB1P82279 1406 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms