RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 USP54Q70EL1 1684 aa15.25■□□□□ 0.03
TPM1-217ENST00000559108 SBNO1A3KN83 1393 aa15.24■□□□□ 0.03
TPM1-217ENST00000559108 CCDC7Q96M83 1385 aa15.24■□□□□ 0.03
TPM1-217ENST00000559108 TMC1Q8TDI8 760 aa15.24■□□□□ 0.03
TPM1-217ENST00000559108 KIF20BQ96Q89 1820 aa15.23■□□□□ 0.03
TPM1-217ENST00000559108 PSME1Q06323 249 aa15.22■□□□□ 0.03
TPM1-217ENST00000559108 POLR3GLQ9BT43 218 aa15.22■□□□□ 0.03
TPM1-217ENST00000559108 ANKRD36BQ8N2N9 1353 aa15.22■□□□□ 0.03
TPM1-217ENST00000559108 JCADQ9P266 1359 aa15.22■□□□□ 0.03
TPM1-217ENST00000559108 CARD14Q9BXL6 1004 aa15.21■□□□□ 0.03
TPM1-217ENST00000559108 KTN1Q86UP2 1357 aaKnown RBP15.21■□□□□ 0.02
TPM1-217ENST00000559108 NINLQ9Y2I6 1382 aa15.21■□□□□ 0.02
TPM1-217ENST00000559108 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
TPM1-217ENST00000559108 CABLES1Q8TDN4 633 aa15.19■□□□□ 0.02
TPM1-217ENST00000559108 LRRC59Q96AG4 307 aaKnown RBP15.19■□□□□ 0.02
TPM1-217ENST00000559108 TTC21BQ7Z4L5 1316 aa15.18■□□□□ 0.02
TPM1-217ENST00000559108 EDC4Q6P2E9 1401 aaKnown RBP15.18■□□□□ 0.02
TPM1-217ENST00000559108 SLIT3O75094 1523 aa15.18■□□□□ 0.02
TPM1-217ENST00000559108 SLC24A1O60721 1099 aa15.18■□□□□ 0.02
TPM1-217ENST00000559108 NUTM2GQ5VZR2 741 aa15.18■□□□□ 0.02
TPM1-217ENST00000559108 ANKRD26Q9UPS8 1709 aa15.17■□□□□ 0.02
TPM1-217ENST00000559108 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
TPM1-217ENST00000559108 CDCA8Q53HL2 280 aa15.17■□□□□ 0.02
TPM1-217ENST00000559108 NSD3Q9BZ95 1437 aa15.17■□□□□ 0.02
TPM1-217ENST00000559108 PAK3O75914 559 aaPredicted RBP15.16■□□□□ 0.02
TPM1-217ENST00000559108 NME9Q86XW9 330 aa15.16■□□□□ 0.02
TPM1-217ENST00000559108 OVOS2A0A0J9YW53 1432 aa15.16■□□□□ 0.02
TPM1-217ENST00000559108 OVOS2Q6IE36 1432 aa15.16■□□□□ 0.02
TPM1-217ENST00000559108 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.15■□□□□ 0.02
TPM1-217ENST00000559108 NFAT5O94916 1531 aa15.15■□□□□ 0.02
TPM1-217ENST00000559108 PLCH1Q4KWH8 1693 aa15.15■□□□□ 0.02
TPM1-217ENST00000559108 USP19O94966 1318 aa15.15■□□□□ 0.02
TPM1-217ENST00000559108 ARHGEF10O15013 1369 aa15.14■□□□□ 0.01
TPM1-217ENST00000559108 BRD4O60885 1362 aaPredicted RBP15.14■□□□□ 0.01
TPM1-217ENST00000559108 LMOD2Q6P5Q4 547 aa15.14■□□□□ 0.01
TPM1-217ENST00000559108 HDGFL2Q7Z4V5 671 aaPredicted RBP15.14■□□□□ 0.01
TPM1-217ENST00000559108 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
TPM1-217ENST00000559108 TERF2IPQ9NYB0 399 aa15.14■□□□□ 0.01
TPM1-217ENST00000559108 LTN1O94822 1766 aa15.13■□□□□ 0.01
TPM1-217ENST00000559108 NUTM2BA6NNL0 878 aaPredicted RBP15.13■□□□□ 0.01
TPM1-217ENST00000559108 NUTM2EB1AL46 878 aaPredicted RBP15.13■□□□□ 0.01
TPM1-217ENST00000559108 NUTM2AQ8IVF1 878 aaPredicted RBP15.13■□□□□ 0.01
TPM1-217ENST00000559108 PANK3Q9H999 370 aa15.13■□□□□ 0.01
TPM1-217ENST00000559108 COL18A1P39060 1754 aa15.13■□□□□ 0.01
TPM1-217ENST00000559108 SPATA31A6Q5VVP1 1343 aa15.13■□□□□ 0.01
TPM1-217ENST00000559108 USP31Q70CQ4 1352 aa15.12■□□□□ 0.01
TPM1-217ENST00000559108 NRAPQ86VF7 1730 aa15.12■□□□□ 0.01
TPM1-217ENST00000559108 RGPD5Q99666 1765 aa15.12■□□□□ 0.01
TPM1-217ENST00000559108 ABTB2Q8N961 1025 aa15.12■□□□□ 0.01
TPM1-217ENST00000559108 LMO7Q8WWI1 1683 aa15.12■□□□□ 0.01
TPM1-217ENST00000559108 TTC21AQ8NDW8 1320 aa15.12■□□□□ 0.01
TPM1-217ENST00000559108 FYB1O15117 783 aa15.1■□□□□ 0.01
TPM1-217ENST00000559108 PER1O15534 1290 aaPredicted RBP15.1■□□□□ 0.01
TPM1-217ENST00000559108 PEAK1Q9H792 1746 aa15.09■□□□□ 0.01
TPM1-217ENST00000559108 ADAMTS2O95450 1211 aa15.09■□□□□ 0.01
TPM1-217ENST00000559108 COL14A1Q05707 1796 aaKnown RBP15.08■□□□□ 0.01
TPM1-217ENST00000559108 FBLN1P23142 703 aa15.08■□□□□ 0
TPM1-217ENST00000559108 NLRP6P59044 892 aa15.08■□□□□ 0
TPM1-217ENST00000559108 GGNBP2Q9H3C7 697 aa15.08■□□□□ 0
TPM1-217ENST00000559108 RGS17Q9UGC6 210 aaPredicted RBP15.07■□□□□ 0
TPM1-217ENST00000559108 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.06■□□□□ 0
TPM1-217ENST00000559108 NWD2Q9ULI1 1742 aa15.06■□□□□ 0
TPM1-217ENST00000559108 AMER1Q5JTC6 1135 aaPredicted RBP15.06■□□□□ 0
TPM1-217ENST00000559108 KIAA0232Q92628 1395 aa15.06■□□□□ 0
TPM1-217ENST00000559108 SLIT2O94813 1529 aa15.06■□□□□ 0
TPM1-217ENST00000559108 NLRP13Q86W25 1043 aa15.05■□□□□ -0
TPM1-217ENST00000559108 CAMTA1Q9Y6Y1 1673 aa15.05■□□□□ -0
TPM1-217ENST00000559108 MAP2P11137 1827 aaKnown RBP15.05■□□□□ -0
TPM1-217ENST00000559108 SOX12O15370 315 aa15.04■□□□□ -0
TPM1-217ENST00000559108 GCP02774 474 aa15.04■□□□□ -0
TPM1-217ENST00000559108 ZC3H6P61129 1189 aaKnown RBP15.04■□□□□ -0
TPM1-217ENST00000559108 BCL9LQ86UU0 1499 aa15.03■□□□□ -0
TPM1-217ENST00000559108 CPDO75976 1380 aa15.03■□□□□ -0
TPM1-217ENST00000559108 FAM83GA6ND36 823 aa15.03■□□□□ -0
TPM1-217ENST00000559108 CHRNA2Q15822 529 aa15.03■□□□□ -0
TPM1-217ENST00000559108 C8orf37Q96NL8 207 aa15.03■□□□□ -0
TPM1-217ENST00000559108 ZNF316A6NFI3 1004 aaPredicted RBP15.02■□□□□ -0
TPM1-217ENST00000559108 RGPD2P0DJD1 1756 aa15.02□□□□□ -0.01
TPM1-217ENST00000559108 DDX10Q13206 875 aaKnown RBP15.01□□□□□ -0.01
TPM1-217ENST00000559108 AFF2P51816 1311 aa15□□□□□ -0.01
TPM1-217ENST00000559108 CGNL1Q0VF96 1302 aa15□□□□□ -0.01
TPM1-217ENST00000559108 ARHGEF25Q86VW2 580 aa15□□□□□ -0.01
TPM1-217ENST00000559108 GLI3P10071 1580 aa14.99□□□□□ -0.01
TPM1-217ENST00000559108 HAP1P54257 671 aaPredicted RBP14.99□□□□□ -0.01
TPM1-217ENST00000559108 MEX3CQ5U5Q3 659 aaKnown RBP14.99□□□□□ -0.01
TPM1-217ENST00000559108 FNBP4Q8N3X1 1017 aaPredicted RBP14.99□□□□□ -0.01
TPM1-217ENST00000559108 COG3Q96JB2 828 aa14.99□□□□□ -0.01
TPM1-217ENST00000559108 MAP3K19Q56UN5 1328 aa14.98□□□□□ -0.01
TPM1-217ENST00000559108 COL5A2P05997 1499 aaPredicted RBP14.98□□□□□ -0.01
TPM1-217ENST00000559108 AXIN2Q9Y2T1 843 aa14.98□□□□□ -0.01
TPM1-217ENST00000559108 NSD2O96028 1365 aa14.98□□□□□ -0.01
TPM1-217ENST00000559108 ABCC6O95255 1503 aa14.97□□□□□ -0.01
TPM1-217ENST00000559108 WNK3Q9BYP7 1800 aa14.97□□□□□ -0.01
TPM1-217ENST00000559108 RRS1Q15050 365 aaKnown RBP14.97□□□□□ -0.01
TPM1-217ENST00000559108 CC2D1BQ5T0F9 858 aaKnown RBP14.97□□□□□ -0.01
TPM1-217ENST00000559108 NGLY1Q96IV0 654 aa14.97□□□□□ -0.01
TPM1-217ENST00000559108 PRDM11Q9NQV5 511 aa14.97□□□□□ -0.01
TPM1-217ENST00000559108 KNSTRNQ9Y448 316 aa14.97□□□□□ -0.01
TPM1-217ENST00000559108 AATKQ6ZMQ8 1374 aa14.97□□□□□ -0.01
TPM1-217ENST00000559108 NPC1L1Q9UHC9 1359 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms