RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 LRPPRCP42704 1394 aaKnown RBP8.8□□□□□ -1
CTDSPL2-204ENST00000558966 DHX57Q6P158 1386 aaKnown RBP8.8□□□□□ -1
CTDSPL2-204ENST00000558966 MED1Q15648 1581 aaPredicted RBP8.8□□□□□ -1
CTDSPL2-204ENST00000558966 ATF3P18847 181 aa8.8□□□□□ -1
CTDSPL2-204ENST00000558966 TMEM132EQ6IEE7 984 aa8.8□□□□□ -1
CTDSPL2-204ENST00000558966 FBXO22Q8NEZ5 403 aa8.8□□□□□ -1
CTDSPL2-204ENST00000558966 PHLPP1O60346 1717 aa8.8□□□□□ -1
CTDSPL2-204ENST00000558966 C14orf93Q9H972 538 aaKnown RBP8.79□□□□□ -1
CTDSPL2-204ENST00000558966 WDR70Q9NW82 654 aa8.79□□□□□ -1
CTDSPL2-204ENST00000558966 YTHDC2Q9H6S0 1430 aaKnown RBP8.79□□□□□ -1
CTDSPL2-204ENST00000558966 ABCC11Q96J66 1382 aa8.79□□□□□ -1
CTDSPL2-204ENST00000558966 DISP3Q9P2K9 1392 aa8.79□□□□□ -1
CTDSPL2-204ENST00000558966 COL16A1Q07092 1604 aaPredicted RBP8.79□□□□□ -1
CTDSPL2-204ENST00000558966 AHDC1Q5TGY3 1603 aaPredicted RBP8.79□□□□□ -1
CTDSPL2-204ENST00000558966 ADGRB1O14514 1584 aa8.79□□□□□ -1
CTDSPL2-204ENST00000558966 CFAP70Q5T0N1 1121 aa8.79□□□□□ -1
CTDSPL2-204ENST00000558966 CDC42BPGQ6DT37 1551 aa8.78□□□□□ -1
CTDSPL2-204ENST00000558966 NLRP6P59044 892 aa8.78□□□□□ -1
CTDSPL2-204ENST00000558966 BRINP3Q76B58 766 aa8.78□□□□□ -1
CTDSPL2-204ENST00000558966 DCAF11Q8TEB1 546 aa8.78□□□□□ -1
CTDSPL2-204ENST00000558966 STK26Q9P289 416 aa8.78□□□□□ -1
CTDSPL2-204ENST00000558966 PLEKHH1Q9ULM0 1364 aa8.78□□□□□ -1
CTDSPL2-204ENST00000558966 NHSL1Q5SYE7 1610 aa8.77□□□□□ -1.01
CTDSPL2-204ENST00000558966 C1orf167Q5SNV9 1468 aa8.77□□□□□ -1.01
CTDSPL2-204ENST00000558966 SOX12O15370 315 aa8.77□□□□□ -1.01
CTDSPL2-204ENST00000558966 TRIM26Q12899 539 aaPredicted RBP8.77□□□□□ -1.01
CTDSPL2-204ENST00000558966 WAPLQ7Z5K2 1190 aa8.77□□□□□ -1.01
CTDSPL2-204ENST00000558966 KCNV2Q8TDN2 545 aa8.77□□□□□ -1.01
CTDSPL2-204ENST00000558966 DLC1Q96QB1 1528 aa8.76□□□□□ -1.01
CTDSPL2-204ENST00000558966 STAC3Q96MF2 364 aa8.75□□□□□ -1.01
CTDSPL2-204ENST00000558966 TRPC6Q9Y210 931 aa8.75□□□□□ -1.01
CTDSPL2-204ENST00000558966 FMN2Q9NZ56 1722 aa8.74□□□□□ -1.01
CTDSPL2-204ENST00000558966 SIRT1Q96EB6 747 aa8.74□□□□□ -1.01
CTDSPL2-204ENST00000558966 KIAA1210Q9ULL0 1709 aa8.74□□□□□ -1.01
CTDSPL2-204ENST00000558966 JCADQ9P266 1359 aa8.73□□□□□ -1.01
CTDSPL2-204ENST00000558966 SHPRHQ149N8 1683 aa8.73□□□□□ -1.01
CTDSPL2-204ENST00000558966 ILDR2Q71H61 639 aa8.73□□□□□ -1.01
CTDSPL2-204ENST00000558966 MS4A3Q96HJ5 214 aa8.73□□□□□ -1.01
CTDSPL2-204ENST00000558966 SIN3AQ96ST3 1273 aa8.73□□□□□ -1.01
CTDSPL2-204ENST00000558966 TMEM106CQ9BVX2 250 aa8.73□□□□□ -1.01
CTDSPL2-204ENST00000558966 ARHGEF28Q8N1W1 1705 aaKnown RBP8.73□□□□□ -1.01
CTDSPL2-204ENST00000558966 DDX17Q92841 729 aaKnown RBP8.72□□□□□ -1.01
CTDSPL2-204ENST00000558966 ORAI2Q96SN7 254 aa8.72□□□□□ -1.01
CTDSPL2-204ENST00000558966 ADGRB2O60241 1585 aa8.72□□□□□ -1.01
CTDSPL2-204ENST00000558966 MS4A4AQ96JQ5 239 aa8.72□□□□□ -1.01
CTDSPL2-204ENST00000558966 PRAM1Q96QH2 718 aa8.72□□□□□ -1.01
CTDSPL2-204ENST00000558966 TRAK1Q9UPV9 953 aa8.72□□□□□ -1.01
CTDSPL2-204ENST00000558966 LRP6O75581 1613 aa8.71□□□□□ -1.01
CTDSPL2-204ENST00000558966 RGPD8O14715 1765 aaPredicted RBP8.7□□□□□ -1.02
CTDSPL2-204ENST00000558966 SAFB2Q14151 953 aaKnown RBP eCLIP8.7□□□□□ -1.02
CTDSPL2-204ENST00000558966 L3MBTL2Q969R5 705 aa8.7□□□□□ -1.02
CTDSPL2-204ENST00000558966 NUTM2FA1L443 756 aa8.7□□□□□ -1.02
CTDSPL2-204ENST00000558966 C19orf67A6NJJ6 358 aa8.7□□□□□ -1.02
CTDSPL2-204ENST00000558966 GOLGA2Q08379 1002 aa8.7□□□□□ -1.02
CTDSPL2-204ENST00000558966 NEUROD1Q13562 356 aa8.7□□□□□ -1.02
CTDSPL2-204ENST00000558966 USP32Q8NFA0 1604 aa8.7□□□□□ -1.02
CTDSPL2-204ENST00000558966 NBPF1Q3BBV0 1214 aa8.69□□□□□ -1.02
CTDSPL2-204ENST00000558966 POGKQ9P215 609 aa8.69□□□□□ -1.02
CTDSPL2-204ENST00000558966 RGS17Q9UGC6 210 aaPredicted RBP8.69□□□□□ -1.02
CTDSPL2-204ENST00000558966 SOS2Q07890 1332 aaPredicted RBP8.69□□□□□ -1.02
CTDSPL2-204ENST00000558966 SPATA31A6Q5VVP1 1343 aa8.69□□□□□ -1.02
CTDSPL2-204ENST00000558966 PNPLA6Q8IY17 1366 aa8.69□□□□□ -1.02
CTDSPL2-204ENST00000558966 PXDNQ92626 1479 aa8.69□□□□□ -1.02
CTDSPL2-204ENST00000558966 KIF1AQ12756 1690 aa8.69□□□□□ -1.02
CTDSPL2-204ENST00000558966 ESCO1Q5FWF5 840 aa8.68□□□□□ -1.02
CTDSPL2-204ENST00000558966 TRPM1Q7Z4N2 1603 aa8.68□□□□□ -1.02
CTDSPL2-204ENST00000558966 LRRC59Q96AG4 307 aaKnown RBP8.68□□□□□ -1.02
CTDSPL2-204ENST00000558966 MINK1Q8N4C8 1332 aaPredicted RBP8.68□□□□□ -1.02
CTDSPL2-204ENST00000558966 NPHP3Q7Z494 1330 aa8.67□□□□□ -1.02
CTDSPL2-204ENST00000558966 HIRIP3Q9BW71 556 aaPredicted RBP8.67□□□□□ -1.02
CTDSPL2-204ENST00000558966 TULP4Q9NRJ4 1543 aa8.66□□□□□ -1.02
CTDSPL2-204ENST00000558966 ANKARQ7Z5J8 1434 aa8.66□□□□□ -1.02
CTDSPL2-204ENST00000558966 FOXO3O43524 673 aa8.66□□□□□ -1.02
CTDSPL2-204ENST00000558966 COL22A1Q8NFW1 1626 aaPredicted RBP8.66□□□□□ -1.02
CTDSPL2-204ENST00000558966 PRR36Q9H6K5 1346 aa8.66□□□□□ -1.02
CTDSPL2-204ENST00000558966 XPCQ01831 940 aaPredicted RBP8.66□□□□□ -1.02
CTDSPL2-204ENST00000558966 MKRN3Q13064 507 aaKnown RBP8.66□□□□□ -1.02
CTDSPL2-204ENST00000558966 E2F4Q16254 413 aa8.66□□□□□ -1.02
CTDSPL2-204ENST00000558966 ATP7BP35670 1465 aa8.65□□□□□ -1.03
CTDSPL2-204ENST00000558966 NUTM2BA6NNL0 878 aaPredicted RBP8.64□□□□□ -1.03
CTDSPL2-204ENST00000558966 NUTM2EB1AL46 878 aaPredicted RBP8.64□□□□□ -1.03
CTDSPL2-204ENST00000558966 WASLO00401 505 aaPredicted RBP8.64□□□□□ -1.03
CTDSPL2-204ENST00000558966 NBPF8Q3BBV2 869 aa8.64□□□□□ -1.03
CTDSPL2-204ENST00000558966 NUTM2AQ8IVF1 878 aaPredicted RBP8.64□□□□□ -1.03
CTDSPL2-204ENST00000558966 LARP6Q9BRS8 491 aaKnown RBP8.64□□□□□ -1.03
CTDSPL2-204ENST00000558966 QRICH2Q9H0J4 1663 aa8.64□□□□□ -1.03
CTDSPL2-204ENST00000558966 EIF3AQ14152 1382 aaKnown RBP8.64□□□□□ -1.03
CTDSPL2-204ENST00000558966 POTEAQ6S8J7 498 aa8.64□□□□□ -1.03
CTDSPL2-204ENST00000558966 TOPAZ1Q8N9V7 1692 aa8.63□□□□□ -1.03
CTDSPL2-204ENST00000558966 TONSLQ96HA7 1378 aa8.63□□□□□ -1.03
CTDSPL2-204ENST00000558966 ITSN1Q15811 1721 aa8.63□□□□□ -1.03
CTDSPL2-204ENST00000558966 MEX3CQ5U5Q3 659 aaKnown RBP8.63□□□□□ -1.03
CTDSPL2-204ENST00000558966 ROCK2O75116 1388 aaKnown RBP8.63□□□□□ -1.03
CTDSPL2-204ENST00000558966 GPRASP1Q5JY77 1395 aa8.63□□□□□ -1.03
CTDSPL2-204ENST00000558966 TRPM3Q9HCF6 1732 aaPredicted RBP8.62□□□□□ -1.03
CTDSPL2-204ENST00000558966 CENPJQ9HC77 1338 aaPredicted RBP8.62□□□□□ -1.03
CTDSPL2-204ENST00000558966 TTLL13PA6NNM8 815 aa8.62□□□□□ -1.03
CTDSPL2-204ENST00000558966 PMFBP1Q8TBY8 1022 aa8.62□□□□□ -1.03
CTDSPL2-204ENST00000558966 ARHGEF1Q92888 912 aaKnown RBP8.62□□□□□ -1.03
CTDSPL2-204ENST00000558966 SPATA31A3Q5VYP0 1347 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms