RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 SPHKAPQ2M3C7 1700 aa10.6□□□□□ -0.71
TRAF3-206ENST00000558880 A2ML1A8K2U0 1454 aa10.6□□□□□ -0.71
TRAF3-206ENST00000558880 ADGRB3O60242 1522 aa10.59□□□□□ -0.71
TRAF3-206ENST00000558880 EMP3P54852 163 aa10.59□□□□□ -0.71
TRAF3-206ENST00000558880 GPR153Q6NV75 609 aa10.59□□□□□ -0.71
TRAF3-206ENST00000558880 CCER1Q8TC90 406 aaPredicted RBP10.59□□□□□ -0.71
TRAF3-206ENST00000558880 NLRP1Q9C000 1473 aa10.59□□□□□ -0.71
TRAF3-206ENST00000558880 CCDC144AA2RUR9 1427 aa10.58□□□□□ -0.72
TRAF3-206ENST00000558880 POLR1AO95602 1720 aaPredicted RBP10.58□□□□□ -0.72
TRAF3-206ENST00000558880 HOXB1P14653 301 aaPredicted RBP10.58□□□□□ -0.72
TRAF3-206ENST00000558880 HAP1P54257 671 aaPredicted RBP10.58□□□□□ -0.72
TRAF3-206ENST00000558880 POTEAQ6S8J7 498 aa10.58□□□□□ -0.72
TRAF3-206ENST00000558880 PCDHGA4Q9Y5G9 962 aa10.58□□□□□ -0.72
TRAF3-206ENST00000558880 TMEM131LA2VDJ0 1609 aa10.58□□□□□ -0.72
TRAF3-206ENST00000558880 NEURL4Q96JN8 1562 aa10.57□□□□□ -0.72
TRAF3-206ENST00000558880 SETD1AO15047 1707 aaKnown RBP10.57□□□□□ -0.72
TRAF3-206ENST00000558880 ZFYVE9O95405 1425 aa10.57□□□□□ -0.72
TRAF3-206ENST00000558880 ARHGAP23Q9P227 1491 aa10.56□□□□□ -0.72
TRAF3-206ENST00000558880 SLC34A2O95436 690 aa10.56□□□□□ -0.72
TRAF3-206ENST00000558880 L3MBTL2Q969R5 705 aa10.56□□□□□ -0.72
TRAF3-206ENST00000558880 ZSWIM6Q9HCJ5 1215 aa10.56□□□□□ -0.72
TRAF3-206ENST00000558880 NUDT7P0C024 238 aa10.55□□□□□ -0.72
TRAF3-206ENST00000558880 LTKP29376 864 aa10.55□□□□□ -0.72
TRAF3-206ENST00000558880 NEUROD1Q13562 356 aa10.55□□□□□ -0.72
TRAF3-206ENST00000558880 CFAP65Q6ZU64 1925 aaKnown RBP10.54□□□□□ -0.72
TRAF3-206ENST00000558880 TMEM2Q9UHN6 1383 aa10.54□□□□□ -0.72
TRAF3-206ENST00000558880 FAM205CA6NFA0 338 aa10.54□□□□□ -0.72
TRAF3-206ENST00000558880 SLIT1O75093 1534 aa10.53□□□□□ -0.72
TRAF3-206ENST00000558880 RGL3Q3MIN7 710 aa10.53□□□□□ -0.72
TRAF3-206ENST00000558880 ANKLE2Q86XL3 938 aa10.53□□□□□ -0.72
TRAF3-206ENST00000558880 PTCD2Q8WV60 388 aaKnown RBP10.53□□□□□ -0.72
TRAF3-206ENST00000558880 EMILIN3Q9NT22 766 aa10.53□□□□□ -0.72
TRAF3-206ENST00000558880 WDR70Q9NW82 654 aa10.53□□□□□ -0.72
TRAF3-206ENST00000558880 NRXN1Q9ULB1 1477 aa10.53□□□□□ -0.72
TRAF3-206ENST00000558880 ADGRF5Q8IZF2 1346 aa10.53□□□□□ -0.72
TRAF3-206ENST00000558880 NEXMIFQ5QGS0 1516 aa10.53□□□□□ -0.72
TRAF3-206ENST00000558880 UBR1Q8IWV7 1749 aa10.53□□□□□ -0.72
TRAF3-206ENST00000558880 NBPF8Q3BBV2 869 aa10.52□□□□□ -0.73
TRAF3-206ENST00000558880 OXER1Q8TDS5 423 aa10.52□□□□□ -0.73
TRAF3-206ENST00000558880 NPHP4O75161 1426 aaPredicted RBP10.51□□□□□ -0.73
TRAF3-206ENST00000558880 STRCP1A6NGW2 1772 aa10.51□□□□□ -0.73
TRAF3-206ENST00000558880 ERBB3P21860 1342 aa10.51□□□□□ -0.73
TRAF3-206ENST00000558880 KDM5AP29375 1690 aaKnown RBP10.5□□□□□ -0.73
TRAF3-206ENST00000558880 RIMS2Q9UQ26 1411 aa10.5□□□□□ -0.73
TRAF3-206ENST00000558880 POTEB3A0JP26 581 aa10.5□□□□□ -0.73
TRAF3-206ENST00000558880 NUTM2DQ5VT03 806 aaPredicted RBP10.5□□□□□ -0.73
TRAF3-206ENST00000558880 POTEBQ6S5H4 581 aa10.5□□□□□ -0.73
TRAF3-206ENST00000558880 RPGRIP1LQ68CZ1 1315 aa10.5□□□□□ -0.73
TRAF3-206ENST00000558880 LRRC7Q96NW7 1537 aa10.49□□□□□ -0.73
TRAF3-206ENST00000558880 PPP1R15AO75807 674 aaPredicted RBP10.49□□□□□ -0.73
TRAF3-206ENST00000558880 THEMISQ8N1K5 641 aaPredicted RBP10.49□□□□□ -0.73
TRAF3-206ENST00000558880 HS3ST6Q96QI5 342 aa10.49□□□□□ -0.73
TRAF3-206ENST00000558880 ADAMTS13Q76LX8 1427 aa10.49□□□□□ -0.73
TRAF3-206ENST00000558880 MED14O60244 1454 aa10.49□□□□□ -0.73
TRAF3-206ENST00000558880 MYOM2P54296 1465 aa10.49□□□□□ -0.73
TRAF3-206ENST00000558880 TBC1D12O60347 775 aa10.48□□□□□ -0.73
TRAF3-206ENST00000558880 DCAF11Q8TEB1 546 aa10.48□□□□□ -0.73
TRAF3-206ENST00000558880 TIMELESSQ9UNS1 1208 aa10.48□□□□□ -0.73
TRAF3-206ENST00000558880 PIK3C2GO75747 1445 aa10.48□□□□□ -0.73
TRAF3-206ENST00000558880 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
TRAF3-206ENST00000558880 PRAG1Q86YV5 1406 aa10.47□□□□□ -0.73
TRAF3-206ENST00000558880 IFT172Q9UG01 1749 aa10.47□□□□□ -0.73
TRAF3-206ENST00000558880 MYO5BQ9ULV0 1848 aa10.47□□□□□ -0.73
TRAF3-206ENST00000558880 MAP3K9P80192 1104 aa10.46□□□□□ -0.73
TRAF3-206ENST00000558880 CAMK2BQ13554 666 aa10.46□□□□□ -0.73
TRAF3-206ENST00000558880 ZNF326Q5BKZ1 582 aaKnown RBP10.46□□□□□ -0.73
TRAF3-206ENST00000558880 TXNDC2Q86VQ3 553 aa10.46□□□□□ -0.73
TRAF3-206ENST00000558880 LHX6Q9UPM6 363 aa10.46□□□□□ -0.73
TRAF3-206ENST00000558880 SCAF11Q99590 1463 aaKnown RBP10.46□□□□□ -0.74
TRAF3-206ENST00000558880 NRXN3Q9Y4C0 1643 aa10.46□□□□□ -0.74
TRAF3-206ENST00000558880 IQGAP1P46940 1657 aa10.46□□□□□ -0.74
TRAF3-206ENST00000558880 ASXL1Q8IXJ9 1541 aa10.45□□□□□ -0.74
TRAF3-206ENST00000558880 TONSLQ96HA7 1378 aa10.45□□□□□ -0.74
TRAF3-206ENST00000558880 PLEKHG1Q9ULL1 1385 aa10.45□□□□□ -0.74
TRAF3-206ENST00000558880 ZNF316A6NFI3 1004 aaPredicted RBP10.45□□□□□ -0.74
TRAF3-206ENST00000558880 DPYSL4O14531 572 aa10.45□□□□□ -0.74
TRAF3-206ENST00000558880 E2F4Q16254 413 aa10.45□□□□□ -0.74
TRAF3-206ENST00000558880 C14orf93Q9H972 538 aaKnown RBP10.45□□□□□ -0.74
TRAF3-206ENST00000558880 KDM2AQ9Y2K7 1162 aa10.45□□□□□ -0.74
TRAF3-206ENST00000558880 PPLO60437 1756 aa10.44□□□□□ -0.74
TRAF3-206ENST00000558880 NBPF1Q3BBV0 1214 aa10.44□□□□□ -0.74
TRAF3-206ENST00000558880 CFAP70Q5T0N1 1121 aa10.44□□□□□ -0.74
TRAF3-206ENST00000558880 KIF1BO60333 1816 aa10.44□□□□□ -0.74
TRAF3-206ENST00000558880 SETBP1Q9Y6X0 1596 aa10.43□□□□□ -0.74
TRAF3-206ENST00000558880 CDAN1Q8IWY9 1227 aa10.43□□□□□ -0.74
TRAF3-206ENST00000558880 STAC3Q96MF2 364 aa10.43□□□□□ -0.74
TRAF3-206ENST00000558880 ADGRB1O14514 1584 aa10.43□□□□□ -0.74
TRAF3-206ENST00000558880 PTPRUQ92729 1446 aa10.42□□□□□ -0.74
TRAF3-206ENST00000558880 METP08581 1390 aa10.42□□□□□ -0.74
TRAF3-206ENST00000558880 EVI5O60447 810 aa10.42□□□□□ -0.74
TRAF3-206ENST00000558880 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.42□□□□□ -0.74
TRAF3-206ENST00000558880 XIRP1Q702N8 1843 aaKnown RBP10.42□□□□□ -0.74
TRAF3-206ENST00000558880 GPRASP1Q5JY77 1395 aa10.41□□□□□ -0.74
TRAF3-206ENST00000558880 SLC26A8Q96RN1 970 aa10.4□□□□□ -0.74
TRAF3-206ENST00000558880 TBX22Q9Y458 520 aa10.4□□□□□ -0.74
TRAF3-206ENST00000558880 RALGAPBQ86X10 1494 aa10.39□□□□□ -0.75
TRAF3-206ENST00000558880 TMEM132EQ6IEE7 984 aa10.39□□□□□ -0.75
TRAF3-206ENST00000558880 EID1Q9Y6B2 187 aa10.39□□□□□ -0.75
TRAF3-206ENST00000558880 FAM135BQ49AJ0 1406 aa10.38□□□□□ -0.75
TRAF3-206ENST00000558880 ROBO1Q9Y6N7 1651 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms