RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 RBM33Q96EV2 1170 aaKnown RBP8.68□□□□□ -1.02
LRRC28-208ENST00000558771 TMEM2Q9UHN6 1383 aa8.68□□□□□ -1.02
LRRC28-208ENST00000558771 ARHGAP31Q2M1Z3 1444 aa8.68□□□□□ -1.02
LRRC28-208ENST00000558771 DPYSL4O14531 572 aa8.67□□□□□ -1.02
LRRC28-208ENST00000558771 KCNA6P17658 529 aa8.67□□□□□ -1.02
LRRC28-208ENST00000558771 PROSER2Q86WR7 435 aaPredicted RBP8.67□□□□□ -1.02
LRRC28-208ENST00000558771 DUOX2Q9NRD8 1548 aa8.67□□□□□ -1.02
LRRC28-208ENST00000558771 PRDM15P57071 1507 aaPredicted RBP8.66□□□□□ -1.02
LRRC28-208ENST00000558771 LRRC9Q6ZRR7 1453 aa8.66□□□□□ -1.02
LRRC28-208ENST00000558771 PSDA5PKW4 1024 aaPredicted RBP8.66□□□□□ -1.02
LRRC28-208ENST00000558771 SLC26A8Q96RN1 970 aa8.66□□□□□ -1.02
LRRC28-208ENST00000558771 TET3O43151 1660 aa8.65□□□□□ -1.02
LRRC28-208ENST00000558771 KRTAP3-3Q9BYR6 98 aa8.65□□□□□ -1.02
LRRC28-208ENST00000558771 KRTAP3-2Q9BYR7 98 aa8.65□□□□□ -1.02
LRRC28-208ENST00000558771 PHLPP1O60346 1717 aa8.65□□□□□ -1.03
LRRC28-208ENST00000558771 EFCAB6Q5THR3 1501 aa8.64□□□□□ -1.03
LRRC28-208ENST00000558771 JCADQ9P266 1359 aa8.64□□□□□ -1.03
LRRC28-208ENST00000558771 IDI1Q13907 227 aa8.64□□□□□ -1.03
LRRC28-208ENST00000558771 KDM5AP29375 1690 aaKnown RBP8.64□□□□□ -1.03
LRRC28-208ENST00000558771 NWD1Q149M9 1564 aa8.64□□□□□ -1.03
LRRC28-208ENST00000558771 NKTRP30414 1462 aaKnown RBP8.64□□□□□ -1.03
LRRC28-208ENST00000558771 MYOM3Q5VTT5 1437 aa8.63□□□□□ -1.03
LRRC28-208ENST00000558771 MSH6P52701 1360 aa8.63□□□□□ -1.03
LRRC28-208ENST00000558771 KIF15Q9NS87 1388 aa8.63□□□□□ -1.03
LRRC28-208ENST00000558771 SLAIN2Q9P270 581 aa8.63□□□□□ -1.03
LRRC28-208ENST00000558771 ARIH1Q9Y4X5 557 aaPredicted RBP8.63□□□□□ -1.03
LRRC28-208ENST00000558771 ERBINQ96RT1 1412 aa8.63□□□□□ -1.03
LRRC28-208ENST00000558771 LRP6O75581 1613 aa8.62□□□□□ -1.03
LRRC28-208ENST00000558771 COL16A1Q07092 1604 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-208ENST00000558771 PPP4R3BQ5MIZ7 849 aa8.62□□□□□ -1.03
LRRC28-208ENST00000558771 RRP7BPQ9NSQ0 103 aa8.62□□□□□ -1.03
LRRC28-208ENST00000558771 FOSBP53539 338 aa8.61□□□□□ -1.03
LRRC28-208ENST00000558771 MMRN1Q13201 1228 aa8.61□□□□□ -1.03
LRRC28-208ENST00000558771 KANK4Q5T7N3 995 aaPredicted RBP8.61□□□□□ -1.03
LRRC28-208ENST00000558771 ZNF454Q8N9F8 522 aa8.61□□□□□ -1.03
LRRC28-208ENST00000558771 TRIM52Q96A61 297 aa8.61□□□□□ -1.03
LRRC28-208ENST00000558771 SRCAPQ6ZRS2 3230 aa8.61□□□□□ -1.03
LRRC28-208ENST00000558771 KANK1Q14678 1352 aa8.61□□□□□ -1.03
LRRC28-208ENST00000558771 ADGRB3O60242 1522 aa8.6□□□□□ -1.03
LRRC28-208ENST00000558771 LMTK2Q8IWU2 1503 aa8.6□□□□□ -1.03
LRRC28-208ENST00000558771 CROCC2H7BZ55 1655 aa8.6□□□□□ -1.03
LRRC28-208ENST00000558771 SPDYE16A6NNV3 312 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-208ENST00000558771 ZNF772Q68DY9 489 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-208ENST00000558771 POTEEQ6S8J3 1075 aa8.6□□□□□ -1.03
LRRC28-208ENST00000558771 BCANQ96GW7 911 aa8.6□□□□□ -1.03
LRRC28-208ENST00000558771 ABCC5O15440 1437 aa8.6□□□□□ -1.03
LRRC28-208ENST00000558771 NOS1P29475 1434 aa8.6□□□□□ -1.03
LRRC28-208ENST00000558771 CHD2O14647 1828 aaKnown RBP8.59□□□□□ -1.03
LRRC28-208ENST00000558771 SPATA31A6Q5VVP1 1343 aa8.59□□□□□ -1.03
LRRC28-208ENST00000558771 MEX3CQ5U5Q3 659 aaKnown RBP8.59□□□□□ -1.03
LRRC28-208ENST00000558771 KDM2AQ9Y2K7 1162 aa8.59□□□□□ -1.03
LRRC28-208ENST00000558771 AXIN2Q9Y2T1 843 aa8.59□□□□□ -1.03
LRRC28-208ENST00000558771 FGD6Q6ZV73 1430 aa8.59□□□□□ -1.03
LRRC28-208ENST00000558771 VPS8Q8N3P4 1428 aa8.58□□□□□ -1.04
LRRC28-208ENST00000558771 PBX2P40425 430 aa8.58□□□□□ -1.04
LRRC28-208ENST00000558771 PTGER2P43116 358 aa8.58□□□□□ -1.04
LRRC28-208ENST00000558771 PDIA6Q15084 440 aa8.58□□□□□ -1.04
LRRC28-208ENST00000558771 SPNS2Q8IVW8 549 aa8.58□□□□□ -1.04
LRRC28-208ENST00000558771 ZFYVE9O95405 1425 aa8.57□□□□□ -1.04
LRRC28-208ENST00000558771 DAPK1P53355 1430 aa8.57□□□□□ -1.04
LRRC28-208ENST00000558771 SHPRHQ149N8 1683 aa8.57□□□□□ -1.04
LRRC28-208ENST00000558771 ARHGAP33O14559 1287 aa8.57□□□□□ -1.04
LRRC28-208ENST00000558771 RXRBP28702 533 aa8.57□□□□□ -1.04
LRRC28-208ENST00000558771 KCNV2Q8TDN2 545 aa8.57□□□□□ -1.04
LRRC28-208ENST00000558771 ZDHHC16Q969W1 377 aa8.57□□□□□ -1.04
LRRC28-208ENST00000558771 SLC52A1Q9NWF4 448 aa8.57□□□□□ -1.04
LRRC28-208ENST00000558771 PCDHGA10Q9Y5H3 936 aa8.57□□□□□ -1.04
LRRC28-208ENST00000558771 AHDC1Q5TGY3 1603 aaPredicted RBP8.57□□□□□ -1.04
LRRC28-208ENST00000558771 PTPN23Q9H3S7 1636 aa8.57□□□□□ -1.04
LRRC28-208ENST00000558771 PLEKHG1Q9ULL1 1385 aa8.57□□□□□ -1.04
LRRC28-208ENST00000558771 MYO5BQ9ULV0 1848 aa8.57□□□□□ -1.04
LRRC28-208ENST00000558771 NCOA3Q9Y6Q9 1424 aa8.56□□□□□ -1.04
LRRC28-208ENST00000558771 PHF14O94880 888 aa8.56□□□□□ -1.04
LRRC28-208ENST00000558771 VSIG10Q8N0Z9 540 aa8.56□□□□□ -1.04
LRRC28-208ENST00000558771 ARHGEF1Q92888 912 aaKnown RBP8.56□□□□□ -1.04
LRRC28-208ENST00000558771 CHIC2Q9UKJ5 165 aa8.56□□□□□ -1.04
LRRC28-208ENST00000558771 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.56□□□□□ -1.04
LRRC28-208ENST00000558771 RIMS2Q9UQ26 1411 aa8.55□□□□□ -1.04
LRRC28-208ENST00000558771 PPP1R15AO75807 674 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-208ENST00000558771 C14orf37Q86TY3 774 aa8.55□□□□□ -1.04
LRRC28-208ENST00000558771 DDX12PQ92771 950 aa8.55□□□□□ -1.04
LRRC28-208ENST00000558771 BCL2L12Q9HB09 334 aa8.55□□□□□ -1.04
LRRC28-208ENST00000558771 TBX22Q9Y458 520 aa8.55□□□□□ -1.04
LRRC28-208ENST00000558771 CDK12Q9NYV4 1490 aaPredicted RBP8.55□□□□□ -1.04
LRRC28-208ENST00000558771 GCC2Q8IWJ2 1684 aa8.55□□□□□ -1.04
LRRC28-208ENST00000558771 DIP2AQ14689 1571 aa8.54□□□□□ -1.04
LRRC28-208ENST00000558771 ANKRD30AQ9BXX3 1397 aa8.54□□□□□ -1.04
LRRC28-208ENST00000558771 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-208ENST00000558771 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-208ENST00000558771 PSEN2P49810 448 aa8.54□□□□□ -1.04
LRRC28-208ENST00000558771 LSM11P83369 360 aaKnown RBP eCLIP8.54□□□□□ -1.04
LRRC28-208ENST00000558771 ANKRD13DQ6ZTN6 518 aa8.54□□□□□ -1.04
LRRC28-208ENST00000558771 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
LRRC28-208ENST00000558771 EPAS1Q99814 870 aa8.54□□□□□ -1.04
LRRC28-208ENST00000558771 ADAM33Q9BZ11 813 aa8.54□□□□□ -1.04
LRRC28-208ENST00000558771 AFF2P51816 1311 aa8.54□□□□□ -1.04
LRRC28-208ENST00000558771 ATF3P18847 181 aa8.53□□□□□ -1.04
LRRC28-208ENST00000558771 HDGFP51858 240 aaKnown RBP8.53□□□□□ -1.04
LRRC28-208ENST00000558771 TYW1BQ6NUM6 668 aa8.53□□□□□ -1.04
LRRC28-208ENST00000558771 FBXW7Q969H0 707 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms