RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 PMFBP1Q8TBY8 1022 aa17.34■□□□□ 0.37
SMAD3-207ENST00000558763 AKAP12Q02952 1782 aa17.34■□□□□ 0.37
SMAD3-207ENST00000558763 C1orf167Q5SNV9 1468 aa17.34■□□□□ 0.37
SMAD3-207ENST00000558763 CPSF1Q10570 1443 aaKnown RBP17.33■□□□□ 0.37
SMAD3-207ENST00000558763 ESCO1Q5FWF5 840 aa17.33■□□□□ 0.37
SMAD3-207ENST00000558763 MORC1Q86VD1 984 aa17.33■□□□□ 0.36
SMAD3-207ENST00000558763 ORAI2Q96SN7 254 aa17.32■□□□□ 0.36
SMAD3-207ENST00000558763 TERF2IPQ9NYB0 399 aa17.32■□□□□ 0.36
SMAD3-207ENST00000558763 ACEP12821 1306 aa17.31■□□□□ 0.36
SMAD3-207ENST00000558763 HDGFL2Q7Z4V5 671 aaPredicted RBP17.3■□□□□ 0.36
SMAD3-207ENST00000558763 PHF8Q9UPP1 1060 aa17.3■□□□□ 0.36
SMAD3-207ENST00000558763 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
SMAD3-207ENST00000558763 PLEKHG3A1L390 1219 aa17.29■□□□□ 0.36
SMAD3-207ENST00000558763 NGDNQ8NEJ9 315 aaKnown RBP17.29■□□□□ 0.36
SMAD3-207ENST00000558763 FYB1O15117 783 aa17.29■□□□□ 0.36
SMAD3-207ENST00000558763 FKBP8Q14318 412 aa17.29■□□□□ 0.36
SMAD3-207ENST00000558763 SLAIN2Q9P270 581 aa17.28■□□□□ 0.36
SMAD3-207ENST00000558763 KIF1AQ12756 1690 aa17.28■□□□□ 0.36
SMAD3-207ENST00000558763 NRKQ7Z2Y5 1582 aa17.28■□□□□ 0.36
SMAD3-207ENST00000558763 COL3A1P02461 1466 aaPredicted RBP17.27■□□□□ 0.36
SMAD3-207ENST00000558763 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.36
SMAD3-207ENST00000558763 WDR43Q15061 677 aaKnown RBP eCLIP17.27■□□□□ 0.36
SMAD3-207ENST00000558763 GGNBP2Q9H3C7 697 aa17.26■□□□□ 0.35
SMAD3-207ENST00000558763 EDC4Q6P2E9 1401 aaKnown RBP17.26■□□□□ 0.35
SMAD3-207ENST00000558763 USP6P35125 1406 aa17.25■□□□□ 0.35
SMAD3-207ENST00000558763 ZNF521Q96K83 1311 aa17.24■□□□□ 0.35
SMAD3-207ENST00000558763 FOXO3O43524 673 aa17.24■□□□□ 0.35
SMAD3-207ENST00000558763 MTHFSP49914 203 aa17.24■□□□□ 0.35
SMAD3-207ENST00000558763 BRINP3Q76B58 766 aa17.24■□□□□ 0.35
SMAD3-207ENST00000558763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.24■□□□□ 0.35
SMAD3-207ENST00000558763 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
SMAD3-207ENST00000558763 RNF123Q5XPI4 1314 aa17.23■□□□□ 0.35
SMAD3-207ENST00000558763 XPCQ01831 940 aaPredicted RBP17.23■□□□□ 0.35
SMAD3-207ENST00000558763 CERKQ8TCT0 537 aa17.23■□□□□ 0.35
SMAD3-207ENST00000558763 DDX17Q92841 729 aaKnown RBP17.23■□□□□ 0.35
SMAD3-207ENST00000558763 PDE3BQ13370 1112 aa17.22■□□□□ 0.35
SMAD3-207ENST00000558763 SALL2Q9Y467 1007 aaPredicted RBP17.22■□□□□ 0.35
SMAD3-207ENST00000558763 NEFLP07196 543 aa17.22■□□□□ 0.35
SMAD3-207ENST00000558763 PSME1Q06323 249 aa17.22■□□□□ 0.35
SMAD3-207ENST00000558763 IQSEC2Q5JU85 1478 aa17.22■□□□□ 0.35
SMAD3-207ENST00000558763 ROBO1Q9Y6N7 1651 aa17.21■□□□□ 0.35
SMAD3-207ENST00000558763 CDCA7LQ96GN5 454 aa17.2■□□□□ 0.34
SMAD3-207ENST00000558763 MAP2P11137 1827 aaKnown RBP17.19■□□□□ 0.34
SMAD3-207ENST00000558763 UBAP1LF5GYI3 381 aa17.19■□□□□ 0.34
SMAD3-207ENST00000558763 TOM1O60784 492 aa17.19■□□□□ 0.34
SMAD3-207ENST00000558763 PAK3O75914 559 aaPredicted RBP17.19■□□□□ 0.34
SMAD3-207ENST00000558763 CCDC146Q8IYE0 955 aa17.19■□□□□ 0.34
SMAD3-207ENST00000558763 SSH2Q76I76 1423 aa17.19■□□□□ 0.34
SMAD3-207ENST00000558763 TTC21BQ7Z4L5 1316 aa17.19■□□□□ 0.34
SMAD3-207ENST00000558763 PNPLA6Q8IY17 1366 aa17.19■□□□□ 0.34
SMAD3-207ENST00000558763 PIP4K2BP78356 416 aa17.19■□□□□ 0.34
SMAD3-207ENST00000558763 NME9Q86XW9 330 aa17.19■□□□□ 0.34
SMAD3-207ENST00000558763 NPHP3Q7Z494 1330 aa17.18■□□□□ 0.34
SMAD3-207ENST00000558763 KRT28Q7Z3Y7 464 aa17.17■□□□□ 0.34
SMAD3-207ENST00000558763 TRPM3Q9HCF6 1732 aaPredicted RBP17.17■□□□□ 0.34
SMAD3-207ENST00000558763 NHSL1Q5SYE7 1610 aa17.17■□□□□ 0.34
SMAD3-207ENST00000558763 IRX6P78412 446 aaPredicted RBP17.17■□□□□ 0.34
SMAD3-207ENST00000558763 PIK3C2AO00443 1686 aa17.16■□□□□ 0.34
SMAD3-207ENST00000558763 ZRANB1Q9UGI0 708 aa17.16■□□□□ 0.34
SMAD3-207ENST00000558763 PXDNQ92626 1479 aa17.15■□□□□ 0.34
SMAD3-207ENST00000558763 APAF1O14727 1248 aa17.15■□□□□ 0.34
SMAD3-207ENST00000558763 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
SMAD3-207ENST00000558763 TTC21AQ8NDW8 1320 aa17.15■□□□□ 0.34
SMAD3-207ENST00000558763 NUTM2GQ5VZR2 741 aa17.14■□□□□ 0.33
SMAD3-207ENST00000558763 LMOD2Q6P5Q4 547 aa17.13■□□□□ 0.33
SMAD3-207ENST00000558763 ABTB2Q8N961 1025 aa17.13■□□□□ 0.33
SMAD3-207ENST00000558763 OVOS2A0A0J9YW53 1432 aa17.13■□□□□ 0.33
SMAD3-207ENST00000558763 OVOS2Q6IE36 1432 aa17.13■□□□□ 0.33
SMAD3-207ENST00000558763 AATKQ6ZMQ8 1374 aa17.13■□□□□ 0.33
SMAD3-207ENST00000558763 FBLN1P23142 703 aa17.12■□□□□ 0.33
SMAD3-207ENST00000558763 POLKQ9UBT6 870 aa17.12■□□□□ 0.33
SMAD3-207ENST00000558763 PLEKHG5O94827 1062 aa17.11■□□□□ 0.33
SMAD3-207ENST00000558763 ALS2Q96Q42 1657 aa17.11■□□□□ 0.33
SMAD3-207ENST00000558763 CDK12Q9NYV4 1490 aaPredicted RBP17.11■□□□□ 0.33
SMAD3-207ENST00000558763 DUSP27Q5VZP5 1158 aa17.11■□□□□ 0.33
SMAD3-207ENST00000558763 COG3Q96JB2 828 aa17.11■□□□□ 0.33
SMAD3-207ENST00000558763 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
SMAD3-207ENST00000558763 AHDC1Q5TGY3 1603 aaPredicted RBP17.11■□□□□ 0.33
SMAD3-207ENST00000558763 TNS3Q68CZ2 1445 aa17.1■□□□□ 0.33
SMAD3-207ENST00000558763 SOS2Q07890 1332 aaPredicted RBP17.1■□□□□ 0.33
SMAD3-207ENST00000558763 NLRP6P59044 892 aa17.1■□□□□ 0.33
SMAD3-207ENST00000558763 ERICH6BQ5W0A0 696 aa17.1■□□□□ 0.33
SMAD3-207ENST00000558763 TRMT2AQ8IZ69 625 aaKnown RBP17.1■□□□□ 0.33
SMAD3-207ENST00000558763 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
SMAD3-207ENST00000558763 SBNO1A3KN83 1393 aa17.1■□□□□ 0.33
SMAD3-207ENST00000558763 NGEFQ8N5V2 710 aa17.09■□□□□ 0.33
SMAD3-207ENST00000558763 RUNDC1Q96C34 613 aa17.09■□□□□ 0.33
SMAD3-207ENST00000558763 SPINK5Q9NQ38 1064 aaPredicted RBP17.09■□□□□ 0.33
SMAD3-207ENST00000558763 PHLPP1O60346 1717 aa17.09■□□□□ 0.33
SMAD3-207ENST00000558763 SOX12O15370 315 aa17.08■□□□□ 0.33
SMAD3-207ENST00000558763 RCAN3Q9UKA8 241 aa17.08■□□□□ 0.33
SMAD3-207ENST00000558763 USP54Q70EL1 1684 aa17.08■□□□□ 0.32
SMAD3-207ENST00000558763 SPATA31A3Q5VYP0 1347 aa17.08■□□□□ 0.32
SMAD3-207ENST00000558763 GOLGA2Q08379 1002 aa17.08■□□□□ 0.32
SMAD3-207ENST00000558763 SLFN5Q08AF3 891 aa17.08■□□□□ 0.32
SMAD3-207ENST00000558763 USP31Q70CQ4 1352 aa17.07■□□□□ 0.32
SMAD3-207ENST00000558763 PLEKHF1Q96S99 279 aa17.07■□□□□ 0.32
SMAD3-207ENST00000558763 EMILIN1Q9Y6C2 1016 aa17.07■□□□□ 0.32
SMAD3-207ENST00000558763 PEAK1Q9H792 1746 aa17.07■□□□□ 0.32
SMAD3-207ENST00000558763 U2AF1L5P0DN76 240 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms