RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 TSR2Q969E8 191 aaKnown RBP14.06□□□□□ -0.16
CSPG4P5-201ENST00000558731 HSPA2P54652 639 aa14.06□□□□□ -0.16
CSPG4P5-201ENST00000558731 RIPK4P57078 832 aa14.06□□□□□ -0.16
CSPG4P5-201ENST00000558731 CLUAP1Q96AJ1 413 aa14.06□□□□□ -0.16
CSPG4P5-201ENST00000558731 TBX22Q9Y458 520 aa14.06□□□□□ -0.16
CSPG4P5-201ENST00000558731 POLR3AO14802 1390 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P5-201ENST00000558731 BLMP54132 1417 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P5-201ENST00000558731 NLRP6P59044 892 aa14.05□□□□□ -0.16
CSPG4P5-201ENST00000558731 ESCO1Q5FWF5 840 aa14.05□□□□□ -0.16
CSPG4P5-201ENST00000558731 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.05□□□□□ -0.16
CSPG4P5-201ENST00000558731 POLKQ9UBT6 870 aa14.05□□□□□ -0.16
CSPG4P5-201ENST00000558731 PLEKHG1Q9ULL1 1385 aa14.05□□□□□ -0.16
CSPG4P5-201ENST00000558731 NINLQ9Y2I6 1382 aa14.05□□□□□ -0.16
CSPG4P5-201ENST00000558731 E9PSI1 815 aa14.05□□□□□ -0.16
CSPG4P5-201ENST00000558731 SLFN5Q08AF3 891 aa14.05□□□□□ -0.16
CSPG4P5-201ENST00000558731 NLRP1Q9C000 1473 aa14.05□□□□□ -0.16
CSPG4P5-201ENST00000558731 THUMPD2Q9BTF0 503 aaKnown RBP14.04□□□□□ -0.16
CSPG4P5-201ENST00000558731 ELL2O00472 640 aaPredicted RBP14.04□□□□□ -0.16
CSPG4P5-201ENST00000558731 ADAMTS13Q76LX8 1427 aa14.04□□□□□ -0.16
CSPG4P5-201ENST00000558731 AMPHP49418 695 aa14.03□□□□□ -0.16
CSPG4P5-201ENST00000558731 NSD2O96028 1365 aa14.03□□□□□ -0.16
CSPG4P5-201ENST00000558731 ZNF692Q9BU19 519 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P5-201ENST00000558731 MYO3AQ8NEV4 1616 aa14.03□□□□□ -0.16
CSPG4P5-201ENST00000558731 ABTB2Q8N961 1025 aa14.02□□□□□ -0.16
CSPG4P5-201ENST00000558731 TCERG1O14776 1098 aaKnown RBP14.02□□□□□ -0.17
CSPG4P5-201ENST00000558731 PROSER2Q86WR7 435 aaPredicted RBP14.02□□□□□ -0.17
CSPG4P5-201ENST00000558731 TTC21BQ7Z4L5 1316 aa14.01□□□□□ -0.17
CSPG4P5-201ENST00000558731 PSME1Q06323 249 aa14.01□□□□□ -0.17
CSPG4P5-201ENST00000558731 SKAP1Q86WV1 359 aa14.01□□□□□ -0.17
CSPG4P5-201ENST00000558731 FER1L4A9Z1Z3 1794 aa14□□□□□ -0.17
CSPG4P5-201ENST00000558731 TMPOP42166 694 aaKnown RBP14□□□□□ -0.17
CSPG4P5-201ENST00000558731 ERICH6BQ5W0A0 696 aa14□□□□□ -0.17
CSPG4P5-201ENST00000558731 PTPRUQ92729 1446 aa14□□□□□ -0.17
CSPG4P5-201ENST00000558731 HSP90AB2PQ58FF8 381 aa13.99□□□□□ -0.17
CSPG4P5-201ENST00000558731 SULT6B1Q6IMI4 303 aa13.99□□□□□ -0.17
CSPG4P5-201ENST00000558731 FOXO3O43524 673 aa13.99□□□□□ -0.17
CSPG4P5-201ENST00000558731 MYH16Q9H6N6 1097 aa13.99□□□□□ -0.17
CSPG4P5-201ENST00000558731 DCTN1Q14203 1278 aa13.98□□□□□ -0.17
CSPG4P5-201ENST00000558731 PANK1Q8TE04 598 aa13.98□□□□□ -0.17
CSPG4P5-201ENST00000558731 COG6Q9Y2V7 657 aa13.98□□□□□ -0.17
CSPG4P5-201ENST00000558731 RIMS1Q86UR5 1692 aaKnown RBP13.98□□□□□ -0.17
CSPG4P5-201ENST00000558731 AEBP1Q8IUX7 1158 aa13.98□□□□□ -0.17
CSPG4P5-201ENST00000558731 PHACTR3Q96KR7 559 aa13.98□□□□□ -0.17
CSPG4P5-201ENST00000558731 PNNQ9H307 717 aaKnown RBP13.98□□□□□ -0.17
CSPG4P5-201ENST00000558731 C3P01024 1663 aa13.97□□□□□ -0.17
CSPG4P5-201ENST00000558731 CD163L1Q9NR16 1453 aa13.97□□□□□ -0.17
CSPG4P5-201ENST00000558731 EXOSC9Q06265 439 aaKnown RBP13.97□□□□□ -0.17
CSPG4P5-201ENST00000558731 UBR1Q8IWV7 1749 aa13.97□□□□□ -0.17
CSPG4P5-201ENST00000558731 NPM2Q86SE8 214 aaKnown RBP13.96□□□□□ -0.17
CSPG4P5-201ENST00000558731 SMC4Q9NTJ3 1288 aa13.96□□□□□ -0.17
CSPG4P5-201ENST00000558731 FAM135BQ49AJ0 1406 aa13.96□□□□□ -0.17
CSPG4P5-201ENST00000558731 EDC4Q6P2E9 1401 aaKnown RBP13.96□□□□□ -0.18
CSPG4P5-201ENST00000558731 FAM83GA6ND36 823 aa13.95□□□□□ -0.18
CSPG4P5-201ENST00000558731 FTSJ3Q8IY81 847 aaKnown RBP13.95□□□□□ -0.18
CSPG4P5-201ENST00000558731 PHF8Q9UPP1 1060 aa13.95□□□□□ -0.18
CSPG4P5-201ENST00000558731 SIRT1Q96EB6 747 aa13.94□□□□□ -0.18
CSPG4P5-201ENST00000558731 ZNF521Q96K83 1311 aa13.94□□□□□ -0.18
CSPG4P5-201ENST00000558731 RGS3P49796 1198 aa13.94□□□□□ -0.18
CSPG4P5-201ENST00000558731 ORAI2Q96SN7 254 aa13.94□□□□□ -0.18
CSPG4P5-201ENST00000558731 TNNQ9UQP3 1299 aa13.93□□□□□ -0.18
CSPG4P5-201ENST00000558731 FCHSD2O94868 740 aa13.93□□□□□ -0.18
CSPG4P5-201ENST00000558731 NRXN3Q9Y4C0 1643 aa13.93□□□□□ -0.18
CSPG4P5-201ENST00000558731 NBR1Q14596 966 aa13.92□□□□□ -0.18
CSPG4P5-201ENST00000558731 USHBP1Q8N6Y0 703 aa13.92□□□□□ -0.18
CSPG4P5-201ENST00000558731 DLC1Q96QB1 1528 aa13.92□□□□□ -0.18
CSPG4P5-201ENST00000558731 ATP7BP35670 1465 aa13.92□□□□□ -0.18
CSPG4P5-201ENST00000558731 NKTRP30414 1462 aaKnown RBP13.92□□□□□ -0.18
CSPG4P5-201ENST00000558731 EIF4A2Q14240 407 aaKnown RBP13.92□□□□□ -0.18
CSPG4P5-201ENST00000558731 PLEKHG3A1L390 1219 aa13.91□□□□□ -0.18
CSPG4P5-201ENST00000558731 DDX17Q92841 729 aaKnown RBP13.91□□□□□ -0.18
CSPG4P5-201ENST00000558731 CPS1P31327 1500 aa13.91□□□□□ -0.18
CSPG4P5-201ENST00000558731 RNF123Q5XPI4 1314 aa13.91□□□□□ -0.18
CSPG4P5-201ENST00000558731 WDR63Q8IWG1 891 aa13.91□□□□□ -0.18
CSPG4P5-201ENST00000558731 FANCIQ9NVI1 1328 aa13.91□□□□□ -0.18
CSPG4P5-201ENST00000558731 MAP3K19Q56UN5 1328 aa13.91□□□□□ -0.18
CSPG4P5-201ENST00000558731 NGEFQ8N5V2 710 aa13.9□□□□□ -0.18
CSPG4P5-201ENST00000558731 RSPH6AQ9H0K4 717 aa13.9□□□□□ -0.18
CSPG4P5-201ENST00000558731 IL13P35225 146 aa13.9□□□□□ -0.18
CSPG4P5-201ENST00000558731 MCM10Q7L590 875 aa13.9□□□□□ -0.18
CSPG4P5-201ENST00000558731 TRIM35Q9UPQ4 493 aa13.9□□□□□ -0.18
CSPG4P5-201ENST00000558731 MSH5O43196 834 aa13.9□□□□□ -0.18
CSPG4P5-201ENST00000558731 ATF3P18847 181 aa13.9□□□□□ -0.18
CSPG4P5-201ENST00000558731 CEP170BQ9Y4F5 1589 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P5-201ENST00000558731 PLEKHF1Q96S99 279 aa13.89□□□□□ -0.19
CSPG4P5-201ENST00000558731 MIS18AQ9NYP9 233 aa13.89□□□□□ -0.19
CSPG4P5-201ENST00000558731 CPSF1Q10570 1443 aaKnown RBP13.89□□□□□ -0.19
CSPG4P5-201ENST00000558731 RARSP54136 660 aaKnown RBP13.89□□□□□ -0.19
CSPG4P5-201ENST00000558731 NFE2L2Q16236 605 aa13.89□□□□□ -0.19
CSPG4P5-201ENST00000558731 RTF1Q92541 710 aaKnown RBP13.89□□□□□ -0.19
CSPG4P5-201ENST00000558731 TECPR2O15040 1411 aa13.89□□□□□ -0.19
CSPG4P5-201ENST00000558731 ITPRIPQ8IWB1 547 aa13.88□□□□□ -0.19
CSPG4P5-201ENST00000558731 USP6P35125 1406 aa13.88□□□□□ -0.19
CSPG4P5-201ENST00000558731 INSRP06213 1382 aa13.87□□□□□ -0.19
CSPG4P5-201ENST00000558731 ZC3H6P61129 1189 aaKnown RBP13.87□□□□□ -0.19
CSPG4P5-201ENST00000558731 NPHP4O75161 1426 aaPredicted RBP13.86□□□□□ -0.19
CSPG4P5-201ENST00000558731 DEKP35659 375 aaKnown RBP13.86□□□□□ -0.19
CSPG4P5-201ENST00000558731 HAP1P54257 671 aaPredicted RBP13.86□□□□□ -0.19
CSPG4P5-201ENST00000558731 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
CSPG4P5-201ENST00000558731 SSH1Q8WYL5 1049 aa13.85□□□□□ -0.19
CSPG4P5-201ENST00000558731 ARHGAP23Q9P227 1491 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms