RNA–Protein interactions for RNA: ENST00000558726.5

TMC3-202, Transcript of transmembrane channel like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMC3, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-202ENST00000558726 CCDC27Q2M243 656 aa13.21□□□□□ -0.29
TMC3-202ENST00000558726 SSH1Q8WYL5 1049 aa13.21□□□□□ -0.29
TMC3-202ENST00000558726 IL16Q14005 1332 aa13.21□□□□□ -0.3
TMC3-202ENST00000558726 PRAM1Q96QH2 718 aa13.2□□□□□ -0.3
TMC3-202ENST00000558726 TSPYL4Q9UJ04 414 aa13.2□□□□□ -0.3
TMC3-202ENST00000558726 CDK11BP21127 795 aaKnown RBP13.2□□□□□ -0.3
TMC3-202ENST00000558726 RPAP2Q8IXW5 612 aaPredicted RBP13.2□□□□□ -0.3
TMC3-202ENST00000558726 BLMP54132 1417 aaPredicted RBP13.2□□□□□ -0.3
TMC3-202ENST00000558726 SMC3Q9UQE7 1217 aa13.2□□□□□ -0.3
TMC3-202ENST00000558726 RRP9O43818 475 aaKnown RBP13.2□□□□□ -0.3
TMC3-202ENST00000558726 TPM3P06753 285 aa13.2□□□□□ -0.3
TMC3-202ENST00000558726 FAM13BQ9NYF5 915 aa13.2□□□□□ -0.3
TMC3-202ENST00000558726 PLEKHH1Q9ULM0 1364 aa13.2□□□□□ -0.3
TMC3-202ENST00000558726 ERC2O15083 957 aa13.19□□□□□ -0.3
TMC3-202ENST00000558726 MAGI3Q5TCQ9 1506 aa13.19□□□□□ -0.3
TMC3-202ENST00000558726 HSP90B1P14625 803 aaKnown RBP13.19□□□□□ -0.3
TMC3-202ENST00000558726 HDAC1Q13547 482 aaPredicted RBP13.19□□□□□ -0.3
TMC3-202ENST00000558726 NFE2L2Q16236 605 aa13.19□□□□□ -0.3
TMC3-202ENST00000558726 KDM2BQ8NHM5 1336 aa13.19□□□□□ -0.3
TMC3-202ENST00000558726 NEK4P51957 841 aa13.19□□□□□ -0.3
TMC3-202ENST00000558726 ARID3AQ99856 593 aa13.19□□□□□ -0.3
TMC3-202ENST00000558726 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.19□□□□□ -0.3
TMC3-202ENST00000558726 PRPF40AO75400 957 aaKnown RBP13.18□□□□□ -0.3
TMC3-202ENST00000558726 C1orf115Q9H7X2 142 aa13.18□□□□□ -0.3
TMC3-202ENST00000558726 ADGRF5Q8IZF2 1346 aa13.18□□□□□ -0.3
TMC3-202ENST00000558726 RNF20Q5VTR2 975 aa13.18□□□□□ -0.3
TMC3-202ENST00000558726 GOLGA6L19H0YKK7 550 aa13.17□□□□□ -0.3
TMC3-202ENST00000558726 BMP2KLQ5H9B9 411 aa13.17□□□□□ -0.3
TMC3-202ENST00000558726 R3HCC1Q9Y3T6 440 aaKnown RBP13.17□□□□□ -0.3
TMC3-202ENST00000558726 CCT4P50991 539 aaKnown RBP13.17□□□□□ -0.3
TMC3-202ENST00000558726 GNL2Q13823 731 aaKnown RBP13.17□□□□□ -0.3
TMC3-202ENST00000558726 FOXD4L6Q3SYB3 417 aaPredicted RBP13.17□□□□□ -0.3
TMC3-202ENST00000558726 FOXD4L3Q6VB84 417 aaPredicted RBP13.17□□□□□ -0.3
TMC3-202ENST00000558726 TRIM27P14373 513 aa13.17□□□□□ -0.3
TMC3-202ENST00000558726 CDK19Q9BWU1 502 aa13.17□□□□□ -0.3
TMC3-202ENST00000558726 TSPY26PQ9H489 355 aa13.17□□□□□ -0.3
TMC3-202ENST00000558726 ADGBQ8N7X0 1667 aa13.17□□□□□ -0.3
TMC3-202ENST00000558726 HMGN5P82970 282 aaKnown RBP13.16□□□□□ -0.3
TMC3-202ENST00000558726 ZSCAN30Q86W11 494 aa13.16□□□□□ -0.3
TMC3-202ENST00000558726 DISP1Q96F81 1524 aa13.16□□□□□ -0.3
TMC3-202ENST00000558726 H3BQV1 296 aa13.16□□□□□ -0.3
TMC3-202ENST00000558726 GNAI2P04899 355 aa13.16□□□□□ -0.3
TMC3-202ENST00000558726 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
TMC3-202ENST00000558726 GAS2L2Q8NHY3 880 aa13.16□□□□□ -0.3
TMC3-202ENST00000558726 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
TMC3-202ENST00000558726 CABP1Q9NZU7 370 aa13.16□□□□□ -0.3
TMC3-202ENST00000558726 TEFQ10587 303 aa13.16□□□□□ -0.3
TMC3-202ENST00000558726 IFT57Q9NWB7 429 aa13.16□□□□□ -0.3
TMC3-202ENST00000558726 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
TMC3-202ENST00000558726 CCDC30Q5VVM6 783 aa13.15□□□□□ -0.3
TMC3-202ENST00000558726 IFIT2P09913 472 aaKnown RBP13.15□□□□□ -0.3
TMC3-202ENST00000558726 FAM184AQ8NB25 1140 aa13.15□□□□□ -0.3
TMC3-202ENST00000558726 CCDC34Q96HJ3 373 aa13.15□□□□□ -0.3
TMC3-202ENST00000558726 PUS7Q96PZ0 661 aaKnown RBP13.15□□□□□ -0.3
TMC3-202ENST00000558726 C14orf93Q9H972 538 aaKnown RBP13.15□□□□□ -0.3
TMC3-202ENST00000558726 SYCP2Q9BX26 1530 aa13.15□□□□□ -0.3
TMC3-202ENST00000558726 SRCIN1Q9C0H9 1055 aa13.15□□□□□ -0.3
TMC3-202ENST00000558726 BECN2A8MW95 431 aa13.14□□□□□ -0.31
TMC3-202ENST00000558726 PCDHB15Q9Y5E8 787 aa13.14□□□□□ -0.31
TMC3-202ENST00000558726 WDR33Q9C0J8 1336 aaKnown RBP13.14□□□□□ -0.31
TMC3-202ENST00000558726 CNTROBQ8N137 903 aa13.14□□□□□ -0.31
TMC3-202ENST00000558726 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
TMC3-202ENST00000558726 A2MP01023 1474 aa13.14□□□□□ -0.31
TMC3-202ENST00000558726 PLCH2O75038 1416 aa13.14□□□□□ -0.31
TMC3-202ENST00000558726 NUTM2FA1L443 756 aa13.14□□□□□ -0.31
TMC3-202ENST00000558726 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
TMC3-202ENST00000558726 ANKRD36BQ8N2N9 1353 aa13.13□□□□□ -0.31
TMC3-202ENST00000558726 TNPO1Q92973 898 aaKnown RBP13.13□□□□□ -0.31
TMC3-202ENST00000558726 RNF214Q8ND24 703 aa13.12□□□□□ -0.31
TMC3-202ENST00000558726 KDM5CP41229 1560 aa13.12□□□□□ -0.31
TMC3-202ENST00000558726 SF3A1Q15459 793 aaKnown RBP13.12□□□□□ -0.31
TMC3-202ENST00000558726 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
TMC3-202ENST00000558726 SNX21Q969T3 373 aa13.12□□□□□ -0.31
TMC3-202ENST00000558726 ADGRL1O94910 1474 aa13.12□□□□□ -0.31
TMC3-202ENST00000558726 RTEL1-TNFRSF6BF6WH68 1400 aa13.12□□□□□ -0.31
TMC3-202ENST00000558726 NOS1P29475 1434 aa13.12□□□□□ -0.31
TMC3-202ENST00000558726 VPS37CA5D8V6 355 aaPredicted RBP13.12□□□□□ -0.31
TMC3-202ENST00000558726 ARHGAP45Q92619 1136 aa13.12□□□□□ -0.31
TMC3-202ENST00000558726 PBRM1Q86U86 1689 aa13.12□□□□□ -0.31
TMC3-202ENST00000558726 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
TMC3-202ENST00000558726 PDCP20941 246 aa13.11□□□□□ -0.31
TMC3-202ENST00000558726 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
TMC3-202ENST00000558726 LRRCC1Q9C099 1032 aa13.11□□□□□ -0.31
TMC3-202ENST00000558726 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
TMC3-202ENST00000558726 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
TMC3-202ENST00000558726 PSMA5P28066 241 aa13.11□□□□□ -0.31
TMC3-202ENST00000558726 CLCN1P35523 988 aa13.11□□□□□ -0.31
TMC3-202ENST00000558726 PDIA4P13667 645 aaKnown RBP13.1□□□□□ -0.31
TMC3-202ENST00000558726 G3BP1Q13283 466 aaKnown RBP eCLIP13.1□□□□□ -0.31
TMC3-202ENST00000558726 NCBP3Q53F19 620 aaKnown RBP13.1□□□□□ -0.31
TMC3-202ENST00000558726 KDM6BO15054 1643 aa13.1□□□□□ -0.31
TMC3-202ENST00000558726 NUCB1Q02818 461 aa13.1□□□□□ -0.31
TMC3-202ENST00000558726 LRRFIP1Q32MZ4 808 aaKnown RBP13.1□□□□□ -0.31
TMC3-202ENST00000558726 GORABQ5T7V8 394 aa13.1□□□□□ -0.31
TMC3-202ENST00000558726 SASS6Q6UVJ0 657 aa13.1□□□□□ -0.31
TMC3-202ENST00000558726 KDM5BQ9UGL1 1544 aa13.1□□□□□ -0.31
TMC3-202ENST00000558726 EIF2S2P20042 333 aaKnown RBP13.1□□□□□ -0.31
TMC3-202ENST00000558726 CLASRPQ8N2M8 674 aaKnown RBP13.1□□□□□ -0.31
TMC3-202ENST00000558726 BICD2Q8TD16 824 aa13.09□□□□□ -0.31
TMC3-202ENST00000558726 ZMYM3Q14202 1370 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms