RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 PHF8Q9UPP1 1060 aa14.54□□□□□ -0.08
PSMA4-207ENST00000558635 FARP1Q9Y4F1 1045 aaPredicted RBP14.54□□□□□ -0.08
PSMA4-207ENST00000558635 CCDC61Q9Y6R9 512 aa14.54□□□□□ -0.08
PSMA4-207ENST00000558635 ATP7BP35670 1465 aa14.54□□□□□ -0.08
PSMA4-207ENST00000558635 USP32Q8NFA0 1604 aa14.54□□□□□ -0.08
PSMA4-207ENST00000558635 DISP3Q9P2K9 1392 aa14.53□□□□□ -0.08
PSMA4-207ENST00000558635 C19orf67A6NJJ6 358 aa14.53□□□□□ -0.08
PSMA4-207ENST00000558635 ILDR1Q86SU0 546 aaPredicted RBP14.53□□□□□ -0.08
PSMA4-207ENST00000558635 DDX17Q92841 729 aaKnown RBP14.53□□□□□ -0.08
PSMA4-207ENST00000558635 FOXO3O43524 673 aa14.52□□□□□ -0.09
PSMA4-207ENST00000558635 HSPA1LP34931 641 aa14.52□□□□□ -0.09
PSMA4-207ENST00000558635 PUS7Q96PZ0 661 aaKnown RBP14.51□□□□□ -0.09
PSMA4-207ENST00000558635 CREBZFQ9NS37 354 aa14.51□□□□□ -0.09
PSMA4-207ENST00000558635 CABP1Q9NZU7 370 aa14.51□□□□□ -0.09
PSMA4-207ENST00000558635 ATAD2Q6PL18 1390 aa14.5□□□□□ -0.09
PSMA4-207ENST00000558635 PLEKHG3A1L390 1219 aa14.5□□□□□ -0.09
PSMA4-207ENST00000558635 RGPD8O14715 1765 aaPredicted RBP14.5□□□□□ -0.09
PSMA4-207ENST00000558635 PPIP5K1Q6PFW1 1433 aa14.49□□□□□ -0.09
PSMA4-207ENST00000558635 NPHP3Q7Z494 1330 aa14.49□□□□□ -0.09
PSMA4-207ENST00000558635 XPCQ01831 940 aaPredicted RBP14.49□□□□□ -0.09
PSMA4-207ENST00000558635 FKBP8Q14318 412 aa14.49□□□□□ -0.09
PSMA4-207ENST00000558635 CDCA8Q53HL2 280 aa14.49□□□□□ -0.09
PSMA4-207ENST00000558635 NGDNQ8NEJ9 315 aaKnown RBP14.49□□□□□ -0.09
PSMA4-207ENST00000558635 KRT28Q7Z3Y7 464 aa14.48□□□□□ -0.09
PSMA4-207ENST00000558635 ACEP12821 1306 aa14.47□□□□□ -0.09
PSMA4-207ENST00000558635 C11orf95C9JLR9 678 aaPredicted RBP14.47□□□□□ -0.09
PSMA4-207ENST00000558635 PSME1Q06323 249 aa14.47□□□□□ -0.09
PSMA4-207ENST00000558635 TMC1Q8TDI8 760 aa14.47□□□□□ -0.09
PSMA4-207ENST00000558635 AHDC1Q5TGY3 1603 aaPredicted RBP14.47□□□□□ -0.09
PSMA4-207ENST00000558635 SOS2Q07890 1332 aaPredicted RBP14.46□□□□□ -0.09
PSMA4-207ENST00000558635 KIF1AQ12756 1690 aa14.46□□□□□ -0.09
PSMA4-207ENST00000558635 POLR3GLQ9BT43 218 aa14.46□□□□□ -0.09
PSMA4-207ENST00000558635 SLC12A5Q9H2X9 1139 aa14.46□□□□□ -0.09
PSMA4-207ENST00000558635 POLR3AO14802 1390 aaPredicted RBP14.46□□□□□ -0.1
PSMA4-207ENST00000558635 TOPAZ1Q8N9V7 1692 aa14.46□□□□□ -0.1
PSMA4-207ENST00000558635 NHSL1Q5SYE7 1610 aa14.45□□□□□ -0.1
PSMA4-207ENST00000558635 ITSN1Q15811 1721 aa14.45□□□□□ -0.1
PSMA4-207ENST00000558635 PXDNQ92626 1479 aa14.44□□□□□ -0.1
PSMA4-207ENST00000558635 PHLPP1O60346 1717 aa14.44□□□□□ -0.1
PSMA4-207ENST00000558635 LRRC59Q96AG4 307 aaKnown RBP14.44□□□□□ -0.1
PSMA4-207ENST00000558635 COL16A1Q07092 1604 aaPredicted RBP14.42□□□□□ -0.1
PSMA4-207ENST00000558635 KIF7Q2M1P5 1343 aa14.41□□□□□ -0.1
PSMA4-207ENST00000558635 PAK3O75914 559 aaPredicted RBP14.41□□□□□ -0.1
PSMA4-207ENST00000558635 HDGFL2Q7Z4V5 671 aaPredicted RBP14.41□□□□□ -0.1
PSMA4-207ENST00000558635 TERF2IPQ9NYB0 399 aa14.41□□□□□ -0.1
PSMA4-207ENST00000558635 NINLQ9Y2I6 1382 aa14.41□□□□□ -0.1
PSMA4-207ENST00000558635 CPSF1Q10570 1443 aaKnown RBP14.41□□□□□ -0.1
PSMA4-207ENST00000558635 SPATA31A3Q5VYP0 1347 aa14.41□□□□□ -0.1
PSMA4-207ENST00000558635 CD163L1Q9NR16 1453 aa14.4□□□□□ -0.1
PSMA4-207ENST00000558635 SBNO1A3KN83 1393 aa14.4□□□□□ -0.1
PSMA4-207ENST00000558635 USP6P35125 1406 aa14.4□□□□□ -0.1
PSMA4-207ENST00000558635 KTN1Q86UP2 1357 aaKnown RBP14.39□□□□□ -0.11
PSMA4-207ENST00000558635 JCADQ9P266 1359 aa14.39□□□□□ -0.11
PSMA4-207ENST00000558635 LMOD2Q6P5Q4 547 aa14.39□□□□□ -0.11
PSMA4-207ENST00000558635 WASHC2AQ641Q2 1341 aa14.39□□□□□ -0.11
PSMA4-207ENST00000558635 A0A1W2PP64 1363 aa14.38□□□□□ -0.11
PSMA4-207ENST00000558635 CCDC7Q96M83 1385 aa14.38□□□□□ -0.11
PSMA4-207ENST00000558635 CD44P16070 742 aaKnown RBP14.38□□□□□ -0.11
PSMA4-207ENST00000558635 TNS3Q68CZ2 1445 aa14.38□□□□□ -0.11
PSMA4-207ENST00000558635 BRD4O60885 1362 aaPredicted RBP14.37□□□□□ -0.11
PSMA4-207ENST00000558635 PNPLA6Q8IY17 1366 aa14.37□□□□□ -0.11
PSMA4-207ENST00000558635 TTC21BQ7Z4L5 1316 aa14.37□□□□□ -0.11
PSMA4-207ENST00000558635 ANKRD36BQ8N2N9 1353 aa14.36□□□□□ -0.11
PSMA4-207ENST00000558635 SSH2Q76I76 1423 aa14.36□□□□□ -0.11
PSMA4-207ENST00000558635 ARHGEF10O15013 1369 aa14.35□□□□□ -0.11
PSMA4-207ENST00000558635 TRPM3Q9HCF6 1732 aaPredicted RBP14.35□□□□□ -0.11
PSMA4-207ENST00000558635 PLEKHG5O94827 1062 aa14.35□□□□□ -0.11
PSMA4-207ENST00000558635 NUTM2GQ5VZR2 741 aa14.35□□□□□ -0.11
PSMA4-207ENST00000558635 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.35□□□□□ -0.11
PSMA4-207ENST00000558635 ABTB2Q8N961 1025 aa14.35□□□□□ -0.11
PSMA4-207ENST00000558635 EDC4Q6P2E9 1401 aaKnown RBP14.34□□□□□ -0.11
PSMA4-207ENST00000558635 MYOM1P52179 1685 aa14.34□□□□□ -0.11
PSMA4-207ENST00000558635 CARD14Q9BXL6 1004 aa14.34□□□□□ -0.11
PSMA4-207ENST00000558635 PANK3Q9H999 370 aa14.34□□□□□ -0.11
PSMA4-207ENST00000558635 TTC21AQ8NDW8 1320 aa14.34□□□□□ -0.11
PSMA4-207ENST00000558635 AKAP12Q02952 1782 aa14.34□□□□□ -0.11
PSMA4-207ENST00000558635 NUTM2BA6NNL0 878 aaPredicted RBP14.33□□□□□ -0.12
PSMA4-207ENST00000558635 NUTM2EB1AL46 878 aaPredicted RBP14.33□□□□□ -0.12
PSMA4-207ENST00000558635 NUTM2AQ8IVF1 878 aaPredicted RBP14.33□□□□□ -0.12
PSMA4-207ENST00000558635 CABLES1Q8TDN4 633 aa14.33□□□□□ -0.12
PSMA4-207ENST00000558635 SPATA31A6Q5VVP1 1343 aa14.33□□□□□ -0.12
PSMA4-207ENST00000558635 NLRP6P59044 892 aa14.32□□□□□ -0.12
PSMA4-207ENST00000558635 NME9Q86XW9 330 aa14.32□□□□□ -0.12
PSMA4-207ENST00000558635 SHPRHQ149N8 1683 aa14.32□□□□□ -0.12
PSMA4-207ENST00000558635 ALS2Q96Q42 1657 aa14.32□□□□□ -0.12
PSMA4-207ENST00000558635 NLRP13Q86W25 1043 aa14.31□□□□□ -0.12
PSMA4-207ENST00000558635 ZRANB1Q9UGI0 708 aa14.31□□□□□ -0.12
PSMA4-207ENST00000558635 MON2Q7Z3U7 1717 aa14.31□□□□□ -0.12
PSMA4-207ENST00000558635 NSD3Q9BZ95 1437 aa14.31□□□□□ -0.12
PSMA4-207ENST00000558635 NRKQ7Z2Y5 1582 aa14.3□□□□□ -0.12
PSMA4-207ENST00000558635 MNX1P50219 401 aaPredicted RBP14.29□□□□□ -0.12
PSMA4-207ENST00000558635 HAP1P54257 671 aaPredicted RBP14.29□□□□□ -0.12
PSMA4-207ENST00000558635 COL22A1Q8NFW1 1626 aaPredicted RBP14.29□□□□□ -0.12
PSMA4-207ENST00000558635 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
PSMA4-207ENST00000558635 FYB1O15117 783 aa14.28□□□□□ -0.12
PSMA4-207ENST00000558635 USP19O94966 1318 aa14.28□□□□□ -0.12
PSMA4-207ENST00000558635 ADAMTS2O95450 1211 aa14.28□□□□□ -0.12
PSMA4-207ENST00000558635 PIK3C2AO00443 1686 aa14.27□□□□□ -0.12
PSMA4-207ENST00000558635 LRP6O75581 1613 aa14.27□□□□□ -0.12
PSMA4-207ENST00000558635 USP31Q70CQ4 1352 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms