RNA–Protein interactions for RNA: ENST00000558478.1

AL136295.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL136295.2, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL136295.2-201ENST00000558478 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
AL136295.2-201ENST00000558478 CENPBP07199 599 aaPredicted RBP13.75□□□□□ -0.21
AL136295.2-201ENST00000558478 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
AL136295.2-201ENST00000558478 MSH6P52701 1360 aa13.74□□□□□ -0.21
AL136295.2-201ENST00000558478 TMEM94Q12767 1356 aa13.74□□□□□ -0.21
AL136295.2-201ENST00000558478 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
AL136295.2-201ENST00000558478 POLR3AO14802 1390 aaPredicted RBP13.73□□□□□ -0.21
AL136295.2-201ENST00000558478 ACEP12821 1306 aa13.73□□□□□ -0.21
AL136295.2-201ENST00000558478 NUTM2FA1L443 756 aa13.73□□□□□ -0.21
AL136295.2-201ENST00000558478 ATF3P18847 181 aa13.73□□□□□ -0.21
AL136295.2-201ENST00000558478 NGDNQ8NEJ9 315 aaKnown RBP13.73□□□□□ -0.21
AL136295.2-201ENST00000558478 USP6P35125 1406 aa13.73□□□□□ -0.21
AL136295.2-201ENST00000558478 NRKQ7Z2Y5 1582 aa13.72□□□□□ -0.21
AL136295.2-201ENST00000558478 PPP2R1AP30153 589 aa13.72□□□□□ -0.21
AL136295.2-201ENST00000558478 CADPS2Q86UW7 1296 aa13.72□□□□□ -0.21
AL136295.2-201ENST00000558478 STRCP1A6NGW2 1772 aa13.72□□□□□ -0.21
AL136295.2-201ENST00000558478 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
AL136295.2-201ENST00000558478 TTC21AQ8NDW8 1320 aa13.71□□□□□ -0.21
AL136295.2-201ENST00000558478 CHRDL2Q6WN34 429 aa13.71□□□□□ -0.21
AL136295.2-201ENST00000558478 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.7□□□□□ -0.22
AL136295.2-201ENST00000558478 PHF8Q9UPP1 1060 aa13.7□□□□□ -0.22
AL136295.2-201ENST00000558478 RGPD8O14715 1765 aaPredicted RBP13.69□□□□□ -0.22
AL136295.2-201ENST00000558478 FYB1O15117 783 aa13.69□□□□□ -0.22
AL136295.2-201ENST00000558478 COG3Q96JB2 828 aa13.69□□□□□ -0.22
AL136295.2-201ENST00000558478 CFAP53Q96M91 514 aa13.69□□□□□ -0.22
AL136295.2-201ENST00000558478 LRRC7Q96NW7 1537 aa13.69□□□□□ -0.22
AL136295.2-201ENST00000558478 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
AL136295.2-201ENST00000558478 ESCO1Q5FWF5 840 aa13.68□□□□□ -0.22
AL136295.2-201ENST00000558478 FAM9BQ8IZU0 186 aa13.68□□□□□ -0.22
AL136295.2-201ENST00000558478 PMFBP1Q8TBY8 1022 aa13.68□□□□□ -0.22
AL136295.2-201ENST00000558478 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
AL136295.2-201ENST00000558478 GGNBP2Q9H3C7 697 aa13.68□□□□□ -0.22
AL136295.2-201ENST00000558478 INSRP06213 1382 aa13.68□□□□□ -0.22
AL136295.2-201ENST00000558478 C1orf167Q5SNV9 1468 aa13.67□□□□□ -0.22
AL136295.2-201ENST00000558478 TTC21BQ7Z4L5 1316 aa13.67□□□□□ -0.22
AL136295.2-201ENST00000558478 ZNF335Q9H4Z2 1342 aaPredicted RBP13.67□□□□□ -0.22
AL136295.2-201ENST00000558478 WDR43Q15061 677 aaKnown RBP eCLIP13.67□□□□□ -0.22
AL136295.2-201ENST00000558478 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
AL136295.2-201ENST00000558478 CCDC184Q52MB2 194 aa13.66□□□□□ -0.22
AL136295.2-201ENST00000558478 PNISRQ8TF01 805 aaKnown RBP13.66□□□□□ -0.22
AL136295.2-201ENST00000558478 MST1RQ04912 1400 aa13.65□□□□□ -0.22
AL136295.2-201ENST00000558478 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
AL136295.2-201ENST00000558478 TNNT2P45379 298 aaPredicted RBP13.65□□□□□ -0.22
AL136295.2-201ENST00000558478 AATKQ6ZMQ8 1374 aa13.64□□□□□ -0.23
AL136295.2-201ENST00000558478 PSME1Q06323 249 aa13.64□□□□□ -0.23
AL136295.2-201ENST00000558478 NME9Q86XW9 330 aa13.64□□□□□ -0.23
AL136295.2-201ENST00000558478 OVOS2A0A0J9YW53 1432 aa13.64□□□□□ -0.23
AL136295.2-201ENST00000558478 OVOS2Q6IE36 1432 aa13.64□□□□□ -0.23
AL136295.2-201ENST00000558478 XIRP1Q702N8 1843 aaKnown RBP13.63□□□□□ -0.23
AL136295.2-201ENST00000558478 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
AL136295.2-201ENST00000558478 USP31Q70CQ4 1352 aa13.62□□□□□ -0.23
AL136295.2-201ENST00000558478 USP54Q70EL1 1684 aa13.62□□□□□ -0.23
AL136295.2-201ENST00000558478 MTHFSP49914 203 aa13.61□□□□□ -0.23
AL136295.2-201ENST00000558478 SP7Q8TDD2 431 aaPredicted RBP13.61□□□□□ -0.23
AL136295.2-201ENST00000558478 NUDCQ9Y266 331 aa13.61□□□□□ -0.23
AL136295.2-201ENST00000558478 SMG6Q86US8 1419 aaKnown RBP13.61□□□□□ -0.23
AL136295.2-201ENST00000558478 NPHP3Q7Z494 1330 aa13.61□□□□□ -0.23
AL136295.2-201ENST00000558478 PIK3C2AO00443 1686 aa13.6□□□□□ -0.23
AL136295.2-201ENST00000558478 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
AL136295.2-201ENST00000558478 CDK12Q9NYV4 1490 aaPredicted RBP13.6□□□□□ -0.23
AL136295.2-201ENST00000558478 BLMP54132 1417 aaPredicted RBP13.59□□□□□ -0.23
AL136295.2-201ENST00000558478 ABTB2Q8N961 1025 aa13.59□□□□□ -0.23
AL136295.2-201ENST00000558478 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
AL136295.2-201ENST00000558478 NLRP6P59044 892 aa13.58□□□□□ -0.24
AL136295.2-201ENST00000558478 ZBED9Q6R2W3 1325 aa13.58□□□□□ -0.24
AL136295.2-201ENST00000558478 FOXO3O43524 673 aa13.57□□□□□ -0.24
AL136295.2-201ENST00000558478 KIF24Q5T7B8 1368 aa13.57□□□□□ -0.24
AL136295.2-201ENST00000558478 KCNA4P22459 653 aa13.56□□□□□ -0.24
AL136295.2-201ENST00000558478 KRT28Q7Z3Y7 464 aa13.56□□□□□ -0.24
AL136295.2-201ENST00000558478 KCNH5Q8NCM2 988 aa13.56□□□□□ -0.24
AL136295.2-201ENST00000558478 SLAIN2Q9P270 581 aa13.56□□□□□ -0.24
AL136295.2-201ENST00000558478 SBNO1A3KN83 1393 aa13.56□□□□□ -0.24
AL136295.2-201ENST00000558478 PNPLA6Q8IY17 1366 aa13.56□□□□□ -0.24
AL136295.2-201ENST00000558478 LTBP4Q8N2S1 1624 aa13.55□□□□□ -0.24
AL136295.2-201ENST00000558478 PPM1GO15355 546 aaPredicted RBP13.55□□□□□ -0.24
AL136295.2-201ENST00000558478 DIAPH1O60610 1272 aaKnown RBP13.55□□□□□ -0.24
AL136295.2-201ENST00000558478 PNNQ9H307 717 aaKnown RBP13.55□□□□□ -0.24
AL136295.2-201ENST00000558478 POLKQ9UBT6 870 aa13.55□□□□□ -0.24
AL136295.2-201ENST00000558478 SHPRHQ149N8 1683 aa13.55□□□□□ -0.24
AL136295.2-201ENST00000558478 TRPM3Q9HCF6 1732 aaPredicted RBP13.55□□□□□ -0.24
AL136295.2-201ENST00000558478 MAP2P11137 1827 aaKnown RBP13.55□□□□□ -0.24
AL136295.2-201ENST00000558478 COL3A1P02461 1466 aaPredicted RBP13.55□□□□□ -0.24
AL136295.2-201ENST00000558478 NGEFQ8N5V2 710 aa13.54□□□□□ -0.24
AL136295.2-201ENST00000558478 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
AL136295.2-201ENST00000558478 ADAMTS8Q9UP79 889 aa13.54□□□□□ -0.24
AL136295.2-201ENST00000558478 ARHGEF10O15013 1369 aa13.54□□□□□ -0.24
AL136295.2-201ENST00000558478 BRINP3Q76B58 766 aa13.53□□□□□ -0.24
AL136295.2-201ENST00000558478 RTL1A6NKG5 1358 aa13.53□□□□□ -0.24
AL136295.2-201ENST00000558478 FLT4P35916 1363 aa13.53□□□□□ -0.24
AL136295.2-201ENST00000558478 TNS3Q68CZ2 1445 aa13.53□□□□□ -0.24
AL136295.2-201ENST00000558478 NEFMP07197 916 aa13.52□□□□□ -0.25
AL136295.2-201ENST00000558478 EMILIN1Q9Y6C2 1016 aa13.52□□□□□ -0.25
AL136295.2-201ENST00000558478 ALS2Q96Q42 1657 aa13.51□□□□□ -0.25
AL136295.2-201ENST00000558478 PXDNQ92626 1479 aa13.51□□□□□ -0.25
AL136295.2-201ENST00000558478 U2AF1L5P0DN76 240 aaPredicted RBP13.51□□□□□ -0.25
AL136295.2-201ENST00000558478 U2AF1Q01081 240 aaKnown RBP eCLIP13.51□□□□□ -0.25
AL136295.2-201ENST00000558478 RRS1Q15050 365 aaKnown RBP13.51□□□□□ -0.25
AL136295.2-201ENST00000558478 LMOD2Q6P5Q4 547 aa13.51□□□□□ -0.25
AL136295.2-201ENST00000558478 MARF1Q9Y4F3 1742 aaKnown RBP13.5□□□□□ -0.25
AL136295.2-201ENST00000558478 SLIT3O75094 1523 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms