RNA–Protein interactions for RNA: ENST00000558429.1

AC009269.3-201, humanhuman

TSL 5 BASIC

Gene AC009269.3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009269.3-201ENST00000558429 TSC1Q92574 1164 aa8.9□□□□□ -0.98
AC009269.3-201ENST00000558429 GMPR2Q9P2T1 348 aaKnown RBP8.9□□□□□ -0.98
AC009269.3-201ENST00000558429 QPCTQ16769 361 aa8.89□□□□□ -0.99
AC009269.3-201ENST00000558429 TUSC1Q2TAM9 212 aa8.89□□□□□ -0.99
AC009269.3-201ENST00000558429 ZNF511Q8NB15 262 aa8.89□□□□□ -0.99
AC009269.3-201ENST00000558429 CLK2P49760 499 aaKnown RBP8.88□□□□□ -0.99
AC009269.3-201ENST00000558429 MAP10Q9P2G4 905 aa8.88□□□□□ -0.99
AC009269.3-201ENST00000558429 C11orf95C9JLR9 678 aaPredicted RBP8.87□□□□□ -0.99
AC009269.3-201ENST00000558429 F12P00748 615 aaPredicted RBP8.87□□□□□ -0.99
AC009269.3-201ENST00000558429 RSPH6AQ9H0K4 717 aa8.87□□□□□ -0.99
AC009269.3-201ENST00000558429 WASF2Q9Y6W5 498 aa8.87□□□□□ -0.99
AC009269.3-201ENST00000558429 PER1O15534 1290 aaPredicted RBP8.86□□□□□ -0.99
AC009269.3-201ENST00000558429 LILRB3O75022 631 aa8.86□□□□□ -0.99
AC009269.3-201ENST00000558429 ATP13A2Q9NQ11 1180 aa8.86□□□□□ -0.99
AC009269.3-201ENST00000558429 TLL2Q9Y6L7 1015 aa8.86□□□□□ -0.99
AC009269.3-201ENST00000558429 VARSP26640 1264 aaKnown RBP8.85□□□□□ -0.99
AC009269.3-201ENST00000558429 POLR3EQ9NVU0 708 aa8.85□□□□□ -0.99
AC009269.3-201ENST00000558429 RTL5Q5HYW3 569 aaPredicted RBP8.84□□□□□ -0.99
AC009269.3-201ENST00000558429 HELBQ8NG08 1087 aaPredicted RBP8.84□□□□□ -0.99
AC009269.3-201ENST00000558429 GPBP1L1Q9HC44 474 aaPredicted RBP8.84□□□□□ -0.99
AC009269.3-201ENST00000558429 PLEKHG3A1L390 1219 aa8.82□□□□□ -1
AC009269.3-201ENST00000558429 FOXJ1Q92949 421 aa8.82□□□□□ -1
AC009269.3-201ENST00000558429 KDM4CQ9H3R0 1056 aa8.82□□□□□ -1
AC009269.3-201ENST00000558429 FAM174AQ8TBP5 190 aa8.81□□□□□ -1
AC009269.3-201ENST00000558429 SENP2Q9HC62 589 aa8.81□□□□□ -1
AC009269.3-201ENST00000558429 CAPN5O15484 640 aaPredicted RBP8.8□□□□□ -1
AC009269.3-201ENST00000558429 DDRGK1Q96HY6 314 aa8.8□□□□□ -1
AC009269.3-201ENST00000558429 SNRPBP14678 240 aaKnown RBP8.79□□□□□ -1
AC009269.3-201ENST00000558429 AGERQ15109 404 aa8.79□□□□□ -1
AC009269.3-201ENST00000558429 MPNDQ8N594 471 aa8.79□□□□□ -1
AC009269.3-201ENST00000558429 TRIM47Q96LD4 638 aa8.79□□□□□ -1
AC009269.3-201ENST00000558429 FAM117AQ9C073 453 aa8.79□□□□□ -1
AC009269.3-201ENST00000558429 NNTQ13423 1086 aa8.78□□□□□ -1
AC009269.3-201ENST00000558429 SH3D19Q5HYK7 790 aa8.78□□□□□ -1
AC009269.3-201ENST00000558429 ARMC2Q8NEN0 867 aa8.78□□□□□ -1
AC009269.3-201ENST00000558429 KIFC2Q96AC6 838 aa8.78□□□□□ -1
AC009269.3-201ENST00000558429 BMP1P13497 986 aa8.77□□□□□ -1.01
AC009269.3-201ENST00000558429 ARID5BQ14865 1188 aa8.77□□□□□ -1.01
AC009269.3-201ENST00000558429 SKIV2LQ15477 1246 aaKnown RBP8.77□□□□□ -1.01
AC009269.3-201ENST00000558429 BPHLQ86WA6 291 aaPredicted RBP8.77□□□□□ -1.01
AC009269.3-201ENST00000558429 ATP1B4Q9UN42 357 aaPredicted RBP8.77□□□□□ -1.01
AC009269.3-201ENST00000558429 ADH1CP00326 375 aa8.76□□□□□ -1.01
AC009269.3-201ENST00000558429 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
AC009269.3-201ENST00000558429 NBPF14Q5TI25 921 aa8.76□□□□□ -1.01
AC009269.3-201ENST00000558429 TREML4Q6UXN2 200 aa8.76□□□□□ -1.01
AC009269.3-201ENST00000558429 CTDSPL2Q05D32 466 aa8.75□□□□□ -1.01
AC009269.3-201ENST00000558429 TRIM46Q7Z4K8 759 aa8.75□□□□□ -1.01
AC009269.3-201ENST00000558429 CDK15Q96Q40 435 aa8.75□□□□□ -1.01
AC009269.3-201ENST00000558429 PROCA1Q8NCQ7 364 aaPredicted RBP8.74□□□□□ -1.01
AC009269.3-201ENST00000558429 WDR4P57081 412 aaKnown RBP8.73□□□□□ -1.01
AC009269.3-201ENST00000558429 MAGEB6P1A0A0J9YX57 407 aa8.72□□□□□ -1.01
AC009269.3-201ENST00000558429 WFS1O76024 890 aa8.72□□□□□ -1.01
AC009269.3-201ENST00000558429 TIMP2P16035 220 aa8.72□□□□□ -1.01
AC009269.3-201ENST00000558429 FBXO31Q5XUX0 539 aaPredicted RBP8.72□□□□□ -1.01
AC009269.3-201ENST00000558429 SH3BP5LQ7L8J4 393 aa8.72□□□□□ -1.01
AC009269.3-201ENST00000558429 SH3RF1Q7Z6J0 888 aa8.72□□□□□ -1.01
AC009269.3-201ENST00000558429 LRRN4Q8WUT4 740 aa8.72□□□□□ -1.01
AC009269.3-201ENST00000558429 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.72□□□□□ -1.01
AC009269.3-201ENST00000558429 C1QTNF2Q9BXJ5 285 aa8.72□□□□□ -1.01
AC009269.3-201ENST00000558429 LCE2AQ5TA79 106 aaPredicted RBP8.71□□□□□ -1.02
AC009269.3-201ENST00000558429 GPKOWQ92917 476 aaPredicted RBP eCLIP8.71□□□□□ -1.02
AC009269.3-201ENST00000558429 CARD14Q9BXL6 1004 aa8.71□□□□□ -1.02
AC009269.3-201ENST00000558429 NFX1Q12986 1120 aaKnown RBP8.7□□□□□ -1.02
AC009269.3-201ENST00000558429 NR5A1Q13285 461 aa8.7□□□□□ -1.02
AC009269.3-201ENST00000558429 PPP2R2DQ66LE6 453 aa8.7□□□□□ -1.02
AC009269.3-201ENST00000558429 AP1G2O75843 785 aa8.69□□□□□ -1.02
AC009269.3-201ENST00000558429 NR3C2P08235 984 aa8.69□□□□□ -1.02
AC009269.3-201ENST00000558429 MRPL14Q6P1L8 145 aaKnown RBP8.69□□□□□ -1.02
AC009269.3-201ENST00000558429 KLF16Q9BXK1 252 aaPredicted RBP8.69□□□□□ -1.02
AC009269.3-201ENST00000558429 TERTO14746 1132 aaKnown RBP8.68□□□□□ -1.02
AC009269.3-201ENST00000558429 ZIC2O95409 532 aaPredicted RBP8.68□□□□□ -1.02
AC009269.3-201ENST00000558429 FSHRP23945 695 aa8.68□□□□□ -1.02
AC009269.3-201ENST00000558429 GRM5P41594 1212 aa8.68□□□□□ -1.02
AC009269.3-201ENST00000558429 SCARF1Q14162 830 aa8.68□□□□□ -1.02
AC009269.3-201ENST00000558429 VASH1Q7L8A9 365 aaPredicted RBP8.68□□□□□ -1.02
AC009269.3-201ENST00000558429 TRMT44Q8IYL2 757 aaKnown RBP8.68□□□□□ -1.02
AC009269.3-201ENST00000558429 ZFP42Q96MM3 310 aa8.68□□□□□ -1.02
AC009269.3-201ENST00000558429 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
AC009269.3-201ENST00000558429 STK17AQ9UEE5 414 aa8.68□□□□□ -1.02
AC009269.3-201ENST00000558429 LOC100996750A0A140TA64 210 aa8.67□□□□□ -1.02
AC009269.3-201ENST00000558429 NR6A1Q15406 480 aa8.67□□□□□ -1.02
AC009269.3-201ENST00000558429 ITPKCQ96DU7 683 aa8.67□□□□□ -1.02
AC009269.3-201ENST00000558429 KRTAP4-6Q9BYQ5 205 aa8.67□□□□□ -1.02
AC009269.3-201ENST00000558429 FKBPLQ9UIM3 349 aa8.67□□□□□ -1.02
AC009269.3-201ENST00000558429 MAP4K5Q9Y4K4 846 aa8.67□□□□□ -1.02
AC009269.3-201ENST00000558429 NEUROD2Q15784 382 aa8.66□□□□□ -1.02
AC009269.3-201ENST00000558429 ERFEQ4G0M1 354 aa8.66□□□□□ -1.02
AC009269.3-201ENST00000558429 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
AC009269.3-201ENST00000558429 PDXDC2PQ6P474 469 aa8.65□□□□□ -1.02
AC009269.3-201ENST00000558429 ARHGAP9Q9BRR9 750 aa8.65□□□□□ -1.02
AC009269.3-201ENST00000558429 ZC3H4Q9UPT8 1303 aaKnown RBP8.64□□□□□ -1.03
AC009269.3-201ENST00000558429 USP17L8P0C7I0 530 aa8.64□□□□□ -1.03
AC009269.3-201ENST00000558429 SLC10A4Q96EP9 437 aa8.63□□□□□ -1.03
AC009269.3-201ENST00000558429 PCMTD1Q96MG8 357 aaPredicted RBP8.63□□□□□ -1.03
AC009269.3-201ENST00000558429 NXF1Q9UBU9 619 aaKnown RBP8.63□□□□□ -1.03
AC009269.3-201ENST00000558429 RFC5P40937 340 aa8.62□□□□□ -1.03
AC009269.3-201ENST00000558429 C6orf118Q5T5N4 469 aa8.62□□□□□ -1.03
AC009269.3-201ENST00000558429 ZBTB33Q86T24 672 aa8.62□□□□□ -1.03
AC009269.3-201ENST00000558429 CCDC116Q8IYX3 515 aa8.62□□□□□ -1.03
AC009269.3-201ENST00000558429 HMX1Q9NP08 348 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms