RNA–Protein interactions for RNA: ENST00000558396.1

EXD1-203, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 4

Gene EXD1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-203ENST00000558396 ATAD2Q6PL18 1390 aa12.1□□□□□ -0.47
EXD1-203ENST00000558396 MTHFSP49914 203 aa12.1□□□□□ -0.47
EXD1-203ENST00000558396 SKAP1Q86WV1 359 aa12.1□□□□□ -0.47
EXD1-203ENST00000558396 SLC52A1Q9NWF4 448 aa12.1□□□□□ -0.47
EXD1-203ENST00000558396 TULP4Q9NRJ4 1543 aa12.1□□□□□ -0.47
EXD1-203ENST00000558396 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
EXD1-203ENST00000558396 PANK1Q8TE04 598 aa12.09□□□□□ -0.47
EXD1-203ENST00000558396 GGT6Q6P531 493 aa12.08□□□□□ -0.48
EXD1-203ENST00000558396 FRAT1Q92837 279 aaPredicted RBP12.08□□□□□ -0.48
EXD1-203ENST00000558396 MVPQ14764 893 aaKnown RBP12.07□□□□□ -0.48
EXD1-203ENST00000558396 TERF2IPQ9NYB0 399 aa12.07□□□□□ -0.48
EXD1-203ENST00000558396 USP19O94966 1318 aa12.07□□□□□ -0.48
EXD1-203ENST00000558396 U2AF1L5P0DN76 240 aaPredicted RBP12.06□□□□□ -0.48
EXD1-203ENST00000558396 U2AF1Q01081 240 aaKnown RBP eCLIP12.06□□□□□ -0.48
EXD1-203ENST00000558396 CHMP4BQ9H444 224 aaKnown RBP12.06□□□□□ -0.48
EXD1-203ENST00000558396 PPP6R1Q9UPN7 881 aa12.06□□□□□ -0.48
EXD1-203ENST00000558396 ANKRD26Q9UPS8 1709 aa12.06□□□□□ -0.48
EXD1-203ENST00000558396 TMEM132EQ6IEE7 984 aa12.05□□□□□ -0.48
EXD1-203ENST00000558396 FTSJ3Q8IY81 847 aaKnown RBP12.05□□□□□ -0.48
EXD1-203ENST00000558396 DZIP1LQ8IYY4 767 aaKnown RBP12.05□□□□□ -0.48
EXD1-203ENST00000558396 ZNF428Q96B54 188 aa12.05□□□□□ -0.48
EXD1-203ENST00000558396 DDX19BQ9UMR2 479 aa12.05□□□□□ -0.48
EXD1-203ENST00000558396 IPO8O15397 1037 aaKnown RBP12.04□□□□□ -0.48
EXD1-203ENST00000558396 TNNT2P45379 298 aaPredicted RBP12.04□□□□□ -0.48
EXD1-203ENST00000558396 SLC4A3P48751 1232 aa12.04□□□□□ -0.48
EXD1-203ENST00000558396 HDAC1Q13547 482 aaPredicted RBP12.04□□□□□ -0.48
EXD1-203ENST00000558396 NEUROD2Q15784 382 aa12.04□□□□□ -0.48
EXD1-203ENST00000558396 PDZRN3Q9UPQ7 1066 aa12.04□□□□□ -0.48
EXD1-203ENST00000558396 RRP7AQ9Y3A4 280 aaKnown RBP12.04□□□□□ -0.48
EXD1-203ENST00000558396 MED1Q15648 1581 aaPredicted RBP12.04□□□□□ -0.48
EXD1-203ENST00000558396 A2ML1A8K2U0 1454 aa12.03□□□□□ -0.48
EXD1-203ENST00000558396 COL3A1P02461 1466 aaPredicted RBP12.03□□□□□ -0.48
EXD1-203ENST00000558396 NLRP1Q9C000 1473 aa12.03□□□□□ -0.48
EXD1-203ENST00000558396 HDGFL2Q7Z4V5 671 aaPredicted RBP12.03□□□□□ -0.48
EXD1-203ENST00000558396 TBC1D32Q96NH3 1257 aa12.03□□□□□ -0.48
EXD1-203ENST00000558396 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
EXD1-203ENST00000558396 KIF16BQ96L93 1317 aa12.03□□□□□ -0.48
EXD1-203ENST00000558396 CDC42BPGQ6DT37 1551 aa12.02□□□□□ -0.49
EXD1-203ENST00000558396 EIF5BO60841 1220 aaKnown RBP12.02□□□□□ -0.49
EXD1-203ENST00000558396 HSPA1LP34931 641 aa12.02□□□□□ -0.49
EXD1-203ENST00000558396 ALDH1L2Q3SY69 923 aa12.02□□□□□ -0.49
EXD1-203ENST00000558396 A0A1W2PP64 1363 aa12.02□□□□□ -0.49
EXD1-203ENST00000558396 TMPOP42166 694 aaKnown RBP12.01□□□□□ -0.49
EXD1-203ENST00000558396 PIP4K2BP78356 416 aa12.01□□□□□ -0.49
EXD1-203ENST00000558396 CALD1Q05682 793 aaKnown RBP12.01□□□□□ -0.49
EXD1-203ENST00000558396 PLEKHF1Q96S99 279 aa12.01□□□□□ -0.49
EXD1-203ENST00000558396 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
EXD1-203ENST00000558396 CPS1P31327 1500 aa12.01□□□□□ -0.49
EXD1-203ENST00000558396 TOM1O60784 492 aa12□□□□□ -0.49
EXD1-203ENST00000558396 RLBP1P12271 317 aa12□□□□□ -0.49
EXD1-203ENST00000558396 SRPK2P78362 688 aaKnown RBP12□□□□□ -0.49
EXD1-203ENST00000558396 L1TD1Q5T7N2 865 aaKnown RBP12□□□□□ -0.49
EXD1-203ENST00000558396 CABP2Q9NPB3 220 aa12□□□□□ -0.49
EXD1-203ENST00000558396 PNPLA6Q8IY17 1366 aa12□□□□□ -0.49
EXD1-203ENST00000558396 DLC1Q96QB1 1528 aa12□□□□□ -0.49
EXD1-203ENST00000558396 DIAPH1O60610 1272 aaKnown RBP11.99□□□□□ -0.49
EXD1-203ENST00000558396 FRAT2O75474 233 aaPredicted RBP11.99□□□□□ -0.49
EXD1-203ENST00000558396 BRPF1P55201 1214 aaPredicted RBP11.99□□□□□ -0.49
EXD1-203ENST00000558396 ATF7IPQ6VMQ6 1270 aa11.99□□□□□ -0.49
EXD1-203ENST00000558396 YTHDC2Q9H6S0 1430 aaKnown RBP11.99□□□□□ -0.49
EXD1-203ENST00000558396 TMEM131LA2VDJ0 1609 aa11.99□□□□□ -0.49
EXD1-203ENST00000558396 PPIP5K1Q6PFW1 1433 aa11.98□□□□□ -0.49
EXD1-203ENST00000558396 U2SURPO15042 1029 aaKnown RBP11.98□□□□□ -0.49
EXD1-203ENST00000558396 FCHSD2O94868 740 aa11.98□□□□□ -0.49
EXD1-203ENST00000558396 EXOSC9Q06265 439 aaKnown RBP11.98□□□□□ -0.49
EXD1-203ENST00000558396 IDI1Q13907 227 aa11.98□□□□□ -0.49
EXD1-203ENST00000558396 POGKQ9P215 609 aa11.98□□□□□ -0.49
EXD1-203ENST00000558396 ATP7BP35670 1465 aa11.97□□□□□ -0.49
EXD1-203ENST00000558396 SMC5Q8IY18 1101 aa11.97□□□□□ -0.49
EXD1-203ENST00000558396 TRIM35Q9UPQ4 493 aa11.97□□□□□ -0.49
EXD1-203ENST00000558396 TNRQ92752 1358 aa11.96□□□□□ -0.49
EXD1-203ENST00000558396 FYB1O15117 783 aa11.96□□□□□ -0.49
EXD1-203ENST00000558396 SEC24BO95487 1268 aa11.96□□□□□ -0.49
EXD1-203ENST00000558396 FBXO31Q5XUX0 539 aaPredicted RBP11.96□□□□□ -0.49
EXD1-203ENST00000558396 CFAP44Q96MT7 982 aa11.96□□□□□ -0.49
EXD1-203ENST00000558396 CD163L1Q9NR16 1453 aa11.95□□□□□ -0.5
EXD1-203ENST00000558396 KIF20BQ96Q89 1820 aa11.95□□□□□ -0.5
EXD1-203ENST00000558396 TRIM27P14373 513 aa11.95□□□□□ -0.5
EXD1-203ENST00000558396 RIPK4P57078 832 aa11.95□□□□□ -0.5
EXD1-203ENST00000558396 ITPRIPQ8IWB1 547 aa11.95□□□□□ -0.5
EXD1-203ENST00000558396 IL27Q8NEV9 243 aa11.95□□□□□ -0.5
EXD1-203ENST00000558396 SSH1Q8WYL5 1049 aa11.95□□□□□ -0.5
EXD1-203ENST00000558396 ARHGAP45Q92619 1136 aa11.95□□□□□ -0.5
EXD1-203ENST00000558396 BCL2L13Q9BXK5 485 aa11.95□□□□□ -0.5
EXD1-203ENST00000558396 ANTXR1Q9H6X2 564 aa11.95□□□□□ -0.5
EXD1-203ENST00000558396 ALKQ9UM73 1620 aa11.94□□□□□ -0.5
EXD1-203ENST00000558396 PTMSP20962 102 aa11.94□□□□□ -0.5
EXD1-203ENST00000558396 ANKLE2Q86XL3 938 aa11.94□□□□□ -0.5
EXD1-203ENST00000558396 TBC1D2Q9BYX2 928 aa11.94□□□□□ -0.5
EXD1-203ENST00000558396 C22orf23Q9BZE7 217 aa11.94□□□□□ -0.5
EXD1-203ENST00000558396 GGNBP2Q9H3C7 697 aa11.94□□□□□ -0.5
EXD1-203ENST00000558396 CHMP5Q9NZZ3 219 aa11.94□□□□□ -0.5
EXD1-203ENST00000558396 STRCP1A6NGW2 1772 aa11.94□□□□□ -0.5
EXD1-203ENST00000558396 LMOD3Q0VAK6 560 aa11.93□□□□□ -0.5
EXD1-203ENST00000558396 TSR2Q969E8 191 aaKnown RBP11.93□□□□□ -0.5
EXD1-203ENST00000558396 PRAM1Q96QH2 718 aa11.93□□□□□ -0.5
EXD1-203ENST00000558396 ZBTB40Q9NUA8 1239 aa11.93□□□□□ -0.5
EXD1-203ENST00000558396 NOB1Q9ULX3 412 aaKnown RBP11.93□□□□□ -0.5
EXD1-203ENST00000558396 TNNQ9UQP3 1299 aa11.93□□□□□ -0.5
EXD1-203ENST00000558396 FAM135BQ49AJ0 1406 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms