RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 MYBBP1AQ9BQG0 1328 aaKnown RBP22.88■■□□□ 1.25
SNX1-203ENST00000558040 SSH2Q76I76 1423 aa22.88■■□□□ 1.25
SNX1-203ENST00000558040 ANKRD26Q9UPS8 1709 aa22.88■■□□□ 1.25
SNX1-203ENST00000558040 FYB1O15117 783 aa22.87■■□□□ 1.25
SNX1-203ENST00000558040 PSME1Q06323 249 aa22.87■■□□□ 1.25
SNX1-203ENST00000558040 MORC1Q86VD1 984 aa22.87■■□□□ 1.25
SNX1-203ENST00000558040 FOXO3O43524 673 aa22.84■■□□□ 1.25
SNX1-203ENST00000558040 GGNBP2Q9H3C7 697 aa22.84■■□□□ 1.25
SNX1-203ENST00000558040 NPHP3Q7Z494 1330 aa22.83■■□□□ 1.25
SNX1-203ENST00000558040 IQSEC2Q5JU85 1478 aa22.83■■□□□ 1.25
SNX1-203ENST00000558040 BRINP3Q76B58 766 aa22.82■■□□□ 1.24
SNX1-203ENST00000558040 NLRP13Q86W25 1043 aa22.82■■□□□ 1.24
SNX1-203ENST00000558040 NME9Q86XW9 330 aa22.82■■□□□ 1.24
SNX1-203ENST00000558040 COG3Q96JB2 828 aa22.82■■□□□ 1.24
SNX1-203ENST00000558040 PAK3O75914 559 aaPredicted RBP22.8■■□□□ 1.24
SNX1-203ENST00000558040 KRT28Q7Z3Y7 464 aa22.8■■□□□ 1.24
SNX1-203ENST00000558040 PPP2R1AP30153 589 aa22.79■■□□□ 1.24
SNX1-203ENST00000558040 USP31Q70CQ4 1352 aa22.78■■□□□ 1.24
SNX1-203ENST00000558040 SCAF1Q9H7N4 1312 aaKnown RBP22.78■■□□□ 1.24
SNX1-203ENST00000558040 PIK3C2AO00443 1686 aa22.77■■□□□ 1.24
SNX1-203ENST00000558040 OVOS2A0A0J9YW53 1432 aa22.77■■□□□ 1.24
SNX1-203ENST00000558040 OVOS2Q6IE36 1432 aa22.77■■□□□ 1.24
SNX1-203ENST00000558040 TRPM3Q9HCF6 1732 aaPredicted RBP22.77■■□□□ 1.23
SNX1-203ENST00000558040 TOM1O60784 492 aa22.76■■□□□ 1.23
SNX1-203ENST00000558040 ABTB2Q8N961 1025 aa22.76■■□□□ 1.23
SNX1-203ENST00000558040 MRS2Q9HD23 443 aa22.76■■□□□ 1.23
SNX1-203ENST00000558040 SBNO1A3KN83 1393 aa22.76■■□□□ 1.23
SNX1-203ENST00000558040 TNNT2P45379 298 aaPredicted RBP22.75■■□□□ 1.23
SNX1-203ENST00000558040 XPCQ01831 940 aaPredicted RBP22.75■■□□□ 1.23
SNX1-203ENST00000558040 USP54Q70EL1 1684 aa22.74■■□□□ 1.23
SNX1-203ENST00000558040 PXDNQ92626 1479 aa22.74■■□□□ 1.23
SNX1-203ENST00000558040 ZRANB1Q9UGI0 708 aa22.74■■□□□ 1.23
SNX1-203ENST00000558040 NLRP6P59044 892 aa22.73■■□□□ 1.23
SNX1-203ENST00000558040 NHSL1Q5SYE7 1610 aa22.72■■□□□ 1.23
SNX1-203ENST00000558040 ROBO1Q9Y6N7 1651 aa22.72■■□□□ 1.23
SNX1-203ENST00000558040 CERKQ8TCT0 537 aa22.72■■□□□ 1.23
SNX1-203ENST00000558040 AATKQ6ZMQ8 1374 aa22.72■■□□□ 1.23
SNX1-203ENST00000558040 DDX17Q92841 729 aaKnown RBP22.71■■□□□ 1.23
SNX1-203ENST00000558040 TNS3Q68CZ2 1445 aa22.71■■□□□ 1.23
SNX1-203ENST00000558040 SOS2Q07890 1332 aaPredicted RBP22.7■■□□□ 1.22
SNX1-203ENST00000558040 ALS2Q96Q42 1657 aa22.69■■□□□ 1.22
SNX1-203ENST00000558040 CCDC184Q52MB2 194 aa22.69■■□□□ 1.22
SNX1-203ENST00000558040 ARHGEF10O15013 1369 aa22.68■■□□□ 1.22
SNX1-203ENST00000558040 LMOD2Q6P5Q4 547 aa22.68■■□□□ 1.22
SNX1-203ENST00000558040 SPATA31A3Q5VYP0 1347 aa22.67■■□□□ 1.22
SNX1-203ENST00000558040 UBAP1LF5GYI3 381 aa22.67■■□□□ 1.22
SNX1-203ENST00000558040 NUTM2GQ5VZR2 741 aa22.67■■□□□ 1.22
SNX1-203ENST00000558040 CFAP53Q96M91 514 aa22.67■■□□□ 1.22
SNX1-203ENST00000558040 AHDC1Q5TGY3 1603 aaPredicted RBP22.67■■□□□ 1.22
SNX1-203ENST00000558040 MARF1Q9Y4F3 1742 aaKnown RBP22.66■■□□□ 1.22
SNX1-203ENST00000558040 MTHFSP49914 203 aa22.66■■□□□ 1.22
SNX1-203ENST00000558040 KCNH5Q8NCM2 988 aa22.65■■□□□ 1.22
SNX1-203ENST00000558040 SMG6Q86US8 1419 aaKnown RBP22.65■■□□□ 1.22
SNX1-203ENST00000558040 USP19O94966 1318 aa22.63■■□□□ 1.21
SNX1-203ENST00000558040 POLKQ9UBT6 870 aa22.63■■□□□ 1.21
SNX1-203ENST00000558040 SLIT3O75094 1523 aa22.62■■□□□ 1.21
SNX1-203ENST00000558040 PIP4K2BP78356 416 aa22.62■■□□□ 1.21
SNX1-203ENST00000558040 MAP2P11137 1827 aaKnown RBP22.61■■□□□ 1.21
SNX1-203ENST00000558040 MED1Q15648 1581 aaPredicted RBP22.61■■□□□ 1.21
SNX1-203ENST00000558040 CDK12Q9NYV4 1490 aaPredicted RBP22.6■■□□□ 1.21
SNX1-203ENST00000558040 SOX12O15370 315 aa22.6■■□□□ 1.21
SNX1-203ENST00000558040 PNISRQ8TF01 805 aaKnown RBP22.6■■□□□ 1.21
SNX1-203ENST00000558040 PPM1GO15355 546 aaPredicted RBP22.59■■□□□ 1.21
SNX1-203ENST00000558040 RRS1Q15050 365 aaKnown RBP22.59■■□□□ 1.21
SNX1-203ENST00000558040 EMILIN1Q9Y6C2 1016 aa22.59■■□□□ 1.21
SNX1-203ENST00000558040 NFAT5O94916 1531 aa22.58■■□□□ 1.21
SNX1-203ENST00000558040 FBLN1P23142 703 aa22.58■■□□□ 1.21
SNX1-203ENST00000558040 FAM9BQ8IZU0 186 aa22.58■■□□□ 1.21
SNX1-203ENST00000558040 LRRC59Q96AG4 307 aaKnown RBP22.58■■□□□ 1.21
SNX1-203ENST00000558040 INSRP06213 1382 aa22.58■■□□□ 1.21
SNX1-203ENST00000558040 KIF24Q5T7B8 1368 aa22.58■■□□□ 1.21
SNX1-203ENST00000558040 PHLPP1O60346 1717 aa22.57■■□□□ 1.2
SNX1-203ENST00000558040 GCP02774 474 aa22.57■■□□□ 1.2
SNX1-203ENST00000558040 WDR43Q15061 677 aaKnown RBP eCLIP22.57■■□□□ 1.2
SNX1-203ENST00000558040 PNPLA6Q8IY17 1366 aa22.57■■□□□ 1.2
SNX1-203ENST00000558040 MAP3K19Q56UN5 1328 aa22.56■■□□□ 1.2
SNX1-203ENST00000558040 PHRF1Q9P1Y6 1649 aaKnown RBP22.55■■□□□ 1.2
SNX1-203ENST00000558040 COL3A1P02461 1466 aaPredicted RBP22.54■■□□□ 1.2
SNX1-203ENST00000558040 RTL1A6NKG5 1358 aa22.54■■□□□ 1.2
SNX1-203ENST00000558040 FLT4P35916 1363 aa22.54■■□□□ 1.2
SNX1-203ENST00000558040 AMPHP49418 695 aa22.54■■□□□ 1.2
SNX1-203ENST00000558040 NUDCQ9Y266 331 aa22.54■■□□□ 1.2
SNX1-203ENST00000558040 CRYBG1Q9Y4K1 1723 aa22.53■■□□□ 1.2
SNX1-203ENST00000558040 COL16A1Q07092 1604 aaPredicted RBP22.53■■□□□ 1.2
SNX1-203ENST00000558040 DIAPH1O60610 1272 aaKnown RBP22.52■■□□□ 1.2
SNX1-203ENST00000558040 PLEKHG5O94827 1062 aa22.52■■□□□ 1.2
SNX1-203ENST00000558040 PEAK1Q9H792 1746 aa22.51■■□□□ 1.19
SNX1-203ENST00000558040 LTN1O94822 1766 aa22.51■■□□□ 1.19
SNX1-203ENST00000558040 SHPRHQ149N8 1683 aa22.51■■□□□ 1.19
SNX1-203ENST00000558040 HAP1P54257 671 aaPredicted RBP22.5■■□□□ 1.19
SNX1-203ENST00000558040 ARHGEF25Q86VW2 580 aa22.49■■□□□ 1.19
SNX1-203ENST00000558040 HOXC9P31274 260 aa22.48■■□□□ 1.19
SNX1-203ENST00000558040 CABLES1Q8TDN4 633 aa22.48■■□□□ 1.19
SNX1-203ENST00000558040 YTHDC1Q96MU7 727 aaKnown RBP22.48■■□□□ 1.19
SNX1-203ENST00000558040 COL22A1Q8NFW1 1626 aaPredicted RBP22.48■■□□□ 1.19
SNX1-203ENST00000558040 IP6K1Q92551 441 aa22.47■■□□□ 1.19
SNX1-203ENST00000558040 ABCA3Q99758 1704 aa22.47■■□□□ 1.19
SNX1-203ENST00000558040 ZBTB7CA1YPR0 619 aa22.46■■□□□ 1.19
SNX1-203ENST00000558040 HSP90AB2PQ58FF8 381 aa22.46■■□□□ 1.19
SNX1-203ENST00000558040 ADAMTS8Q9UP79 889 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms