RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 CCDC61Q9Y6R9 512 aa23.3■■□□□ 1.32
AC027088.1-201ENST00000557966 ACEP12821 1306 aa23.3■■□□□ 1.32
AC027088.1-201ENST00000557966 ROCK2O75116 1388 aaKnown RBP23.29■■□□□ 1.32
AC027088.1-201ENST00000557966 PAK3O75914 559 aaPredicted RBP23.29■■□□□ 1.32
AC027088.1-201ENST00000557966 TRIM26Q12899 539 aaPredicted RBP23.29■■□□□ 1.32
AC027088.1-201ENST00000557966 NBPF8Q3BBV2 869 aa23.29■■□□□ 1.32
AC027088.1-201ENST00000557966 NRAPQ86VF7 1730 aa23.28■■□□□ 1.32
AC027088.1-201ENST00000557966 PLEKHG3A1L390 1219 aa23.28■■□□□ 1.32
AC027088.1-201ENST00000557966 CABP2Q9NPB3 220 aa23.28■■□□□ 1.32
AC027088.1-201ENST00000557966 PPIP5K1Q6PFW1 1433 aa23.27■■□□□ 1.32
AC027088.1-201ENST00000557966 PHRF1Q9P1Y6 1649 aaKnown RBP23.27■■□□□ 1.32
AC027088.1-201ENST00000557966 FAM83GA6ND36 823 aa23.27■■□□□ 1.32
AC027088.1-201ENST00000557966 SRPK2P78362 688 aaKnown RBP23.27■■□□□ 1.32
AC027088.1-201ENST00000557966 COL14A1Q05707 1796 aaKnown RBP23.25■■□□□ 1.31
AC027088.1-201ENST00000557966 ATAD2Q6PL18 1390 aa23.25■■□□□ 1.31
AC027088.1-201ENST00000557966 VPS72Q15906 364 aa23.24■■□□□ 1.31
AC027088.1-201ENST00000557966 NUTM2GQ5VZR2 741 aa23.21■■□□□ 1.31
AC027088.1-201ENST00000557966 NRKQ7Z2Y5 1582 aa23.2■■□□□ 1.3
AC027088.1-201ENST00000557966 TONSLQ96HA7 1378 aa23.2■■□□□ 1.3
AC027088.1-201ENST00000557966 BTG4Q9NY30 223 aa23.2■■□□□ 1.3
AC027088.1-201ENST00000557966 BRWD3Q6RI45 1802 aa23.17■■□□□ 1.3
AC027088.1-201ENST00000557966 KIAA0232Q92628 1395 aa23.17■■□□□ 1.3
AC027088.1-201ENST00000557966 EVC2Q86UK5 1308 aa23.17■■□□□ 1.3
AC027088.1-201ENST00000557966 CABP1Q9NZU7 370 aa23.17■■□□□ 1.3
AC027088.1-201ENST00000557966 CCDC9Q9Y3X0 531 aaKnown RBP23.17■■□□□ 1.3
AC027088.1-201ENST00000557966 USP6P35125 1406 aa23.16■■□□□ 1.3
AC027088.1-201ENST00000557966 PRDM11Q9NQV5 511 aa23.16■■□□□ 1.3
AC027088.1-201ENST00000557966 USP19O94966 1318 aa23.15■■□□□ 1.3
AC027088.1-201ENST00000557966 SEPT12Q8IYM1 358 aa23.14■■□□□ 1.29
AC027088.1-201ENST00000557966 ABTB2Q8N961 1025 aa23.14■■□□□ 1.29
AC027088.1-201ENST00000557966 EP400Q96L91 3159 aa23.13■■□□□ 1.29
AC027088.1-201ENST00000557966 ONECUT3O60422 494 aaPredicted RBP23.13■■□□□ 1.29
AC027088.1-201ENST00000557966 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
AC027088.1-201ENST00000557966 CARD11Q9BXL7 1154 aa23.13■■□□□ 1.29
AC027088.1-201ENST00000557966 SSH2Q76I76 1423 aa23.13■■□□□ 1.29
AC027088.1-201ENST00000557966 BRD4O60885 1362 aaPredicted RBP23.13■■□□□ 1.29
AC027088.1-201ENST00000557966 SBNO2Q9Y2G9 1366 aa23.13■■□□□ 1.29
AC027088.1-201ENST00000557966 ZC3H6P61129 1189 aaKnown RBP23.12■■□□□ 1.29
AC027088.1-201ENST00000557966 PIK3C2AO00443 1686 aa23.1■■□□□ 1.29
AC027088.1-201ENST00000557966 LMO7Q8WWI1 1683 aa23.09■■□□□ 1.29
AC027088.1-201ENST00000557966 SPATA31A5Q5VU36 1347 aa23.09■■□□□ 1.29
AC027088.1-201ENST00000557966 SPATA31A7Q8IWB4 1347 aa23.09■■□□□ 1.29
AC027088.1-201ENST00000557966 FAM98CQ17RN3 349 aaKnown RBP23.09■■□□□ 1.29
AC027088.1-201ENST00000557966 AKAP12Q02952 1782 aa23.09■■□□□ 1.29
AC027088.1-201ENST00000557966 SLIT3O75094 1523 aa23.08■■□□□ 1.29
AC027088.1-201ENST00000557966 CPDO75976 1380 aa23.08■■□□□ 1.29
AC027088.1-201ENST00000557966 THSD7AQ9UPZ6 1657 aa23.07■■□□□ 1.28
AC027088.1-201ENST00000557966 NLRP13Q86W25 1043 aa23.07■■□□□ 1.28
AC027088.1-201ENST00000557966 CAMTA1Q9Y6Y1 1673 aa23.06■■□□□ 1.28
AC027088.1-201ENST00000557966 CPSF1Q10570 1443 aaKnown RBP23.06■■□□□ 1.28
AC027088.1-201ENST00000557966 GCP02774 474 aa23.05■■□□□ 1.28
AC027088.1-201ENST00000557966 A0A0G2JS52 829 aa23.04■■□□□ 1.28
AC027088.1-201ENST00000557966 MYT1Q01538 1121 aa23.04■■□□□ 1.28
AC027088.1-201ENST00000557966 KRT27Q7Z3Y8 459 aa23.04■■□□□ 1.28
AC027088.1-201ENST00000557966 STRN4Q9NRL3 753 aa23.04■■□□□ 1.28
AC027088.1-201ENST00000557966 SPATA31A1Q5TZJ5 1347 aa23.04■■□□□ 1.28
AC027088.1-201ENST00000557966 BLMP54132 1417 aaPredicted RBP23.03■■□□□ 1.28
AC027088.1-201ENST00000557966 TTC21BQ7Z4L5 1316 aa23.03■■□□□ 1.28
AC027088.1-201ENST00000557966 MON2Q7Z3U7 1717 aa23.02■■□□□ 1.28
AC027088.1-201ENST00000557966 NLRP6P59044 892 aa23.02■■□□□ 1.28
AC027088.1-201ENST00000557966 CD163L1Q9NR16 1453 aa23.02■■□□□ 1.28
AC027088.1-201ENST00000557966 CCDC125Q86Z20 511 aa23.01■■□□□ 1.27
AC027088.1-201ENST00000557966 ZNF692Q9BU19 519 aaPredicted RBP23■■□□□ 1.27
AC027088.1-201ENST00000557966 COL5A2P05997 1499 aaPredicted RBP22.99■■□□□ 1.27
AC027088.1-201ENST00000557966 KTN1Q86UP2 1357 aaKnown RBP22.99■■□□□ 1.27
AC027088.1-201ENST00000557966 LARP1Q6PKG0 1096 aaKnown RBP22.97■■□□□ 1.27
AC027088.1-201ENST00000557966 TTC21AQ8NDW8 1320 aa22.97■■□□□ 1.27
AC027088.1-201ENST00000557966 TESK2Q96S53 571 aa22.96■■□□□ 1.27
AC027088.1-201ENST00000557966 COL18A1P39060 1754 aa22.96■■□□□ 1.27
AC027088.1-201ENST00000557966 ZBTB7CA1YPR0 619 aa22.95■■□□□ 1.26
AC027088.1-201ENST00000557966 EVA1CP58658 441 aa22.95■■□□□ 1.26
AC027088.1-201ENST00000557966 FAM182BQ5T319 152 aa22.95■■□□□ 1.26
AC027088.1-201ENST00000557966 DEFB132Q7Z7B7 95 aa22.95■■□□□ 1.26
AC027088.1-201ENST00000557966 USP35Q9P2H5 1018 aa22.95■■□□□ 1.26
AC027088.1-201ENST00000557966 AATKQ6ZMQ8 1374 aa22.94■■□□□ 1.26
AC027088.1-201ENST00000557966 ST20-MTHFSA0A0A6YYL1 179 aa22.94■■□□□ 1.26
AC027088.1-201ENST00000557966 NFAT5O94916 1531 aa22.93■■□□□ 1.26
AC027088.1-201ENST00000557966 USP54Q70EL1 1684 aa22.93■■□□□ 1.26
AC027088.1-201ENST00000557966 TMC1Q8TDI8 760 aa22.92■■□□□ 1.26
AC027088.1-201ENST00000557966 SLC12A5Q9H2X9 1139 aa22.92■■□□□ 1.26
AC027088.1-201ENST00000557966 BARGINQ6ZT62 677 aa22.91■■□□□ 1.26
AC027088.1-201ENST00000557966 ZRANB1Q9UGI0 708 aa22.91■■□□□ 1.26
AC027088.1-201ENST00000557966 A0A1W2PP64 1363 aa22.9■■□□□ 1.26
AC027088.1-201ENST00000557966 SOX12O15370 315 aa22.9■■□□□ 1.26
AC027088.1-201ENST00000557966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.9■■□□□ 1.26
AC027088.1-201ENST00000557966 CRB1P82279 1406 aa22.9■■□□□ 1.26
AC027088.1-201ENST00000557966 USP31Q70CQ4 1352 aa22.89■■□□□ 1.26
AC027088.1-201ENST00000557966 ARHGEF25Q86VW2 580 aa22.89■■□□□ 1.25
AC027088.1-201ENST00000557966 TCP11L2Q8N4U5 519 aa22.89■■□□□ 1.25
AC027088.1-201ENST00000557966 PUS7Q96PZ0 661 aaKnown RBP22.89■■□□□ 1.25
AC027088.1-201ENST00000557966 AXIN2Q9Y2T1 843 aa22.89■■□□□ 1.25
AC027088.1-201ENST00000557966 USP47Q96K76 1375 aa22.89■■□□□ 1.25
AC027088.1-201ENST00000557966 RGPD1P0DJD0 1748 aa22.88■■□□□ 1.25
AC027088.1-201ENST00000557966 SF3B2Q13435 895 aaKnown RBP22.88■■□□□ 1.25
AC027088.1-201ENST00000557966 NME9Q86XW9 330 aa22.88■■□□□ 1.25
AC027088.1-201ENST00000557966 KCNH5Q8NCM2 988 aa22.88■■□□□ 1.25
AC027088.1-201ENST00000557966 PCGF6Q9BYE7 350 aa22.88■■□□□ 1.25
AC027088.1-201ENST00000557966 EDC4Q6P2E9 1401 aaKnown RBP22.88■■□□□ 1.25
AC027088.1-201ENST00000557966 TNS1Q9HBL0 1735 aaKnown RBP22.88■■□□□ 1.25
AC027088.1-201ENST00000557966 HDGFL2Q7Z4V5 671 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms