RNA–Protein interactions for RNA: ENST00000557954.1

PDE8A-207, Transcript of phosphodiesterase 8A, humanhuman

TSL 4

Gene PDE8A, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-207ENST00000557954 ATP13A2Q9NQ11 1180 aa9.72□□□□□ -0.85
PDE8A-207ENST00000557954 RTL5Q5HYW3 569 aaPredicted RBP9.71□□□□□ -0.86
PDE8A-207ENST00000557954 ZNF511Q8NB15 262 aa9.71□□□□□ -0.86
PDE8A-207ENST00000557954 C11orf95C9JLR9 678 aaPredicted RBP9.7□□□□□ -0.86
PDE8A-207ENST00000557954 TUSC1Q2TAM9 212 aa9.7□□□□□ -0.86
PDE8A-207ENST00000557954 TLL2Q9Y6L7 1015 aa9.7□□□□□ -0.86
PDE8A-207ENST00000557954 SNRPBP14678 240 aaKnown RBP9.69□□□□□ -0.86
PDE8A-207ENST00000557954 CTHP32929 405 aa9.69□□□□□ -0.86
PDE8A-207ENST00000557954 FBXO31Q5XUX0 539 aaPredicted RBP9.69□□□□□ -0.86
PDE8A-207ENST00000557954 FOXJ1Q92949 421 aa9.68□□□□□ -0.86
PDE8A-207ENST00000557954 GPBP1L1Q9HC44 474 aaPredicted RBP9.67□□□□□ -0.86
PDE8A-207ENST00000557954 POLR3EQ9NVU0 708 aa9.67□□□□□ -0.86
PDE8A-207ENST00000557954 C4orf48Q5BLP8 95 aa9.66□□□□□ -0.86
PDE8A-207ENST00000557954 CLK2P49760 499 aaKnown RBP9.65□□□□□ -0.86
PDE8A-207ENST00000557954 TREML4Q6UXN2 200 aa9.65□□□□□ -0.86
PDE8A-207ENST00000557954 TRIM46Q7Z4K8 759 aa9.65□□□□□ -0.86
PDE8A-207ENST00000557954 NUTM2BA6NNL0 878 aaPredicted RBP9.64□□□□□ -0.87
PDE8A-207ENST00000557954 NUTM2EB1AL46 878 aaPredicted RBP9.64□□□□□ -0.87
PDE8A-207ENST00000557954 VARSP26640 1264 aaKnown RBP9.64□□□□□ -0.87
PDE8A-207ENST00000557954 LCE2CQ5TA81 110 aa9.64□□□□□ -0.87
PDE8A-207ENST00000557954 NUTM2DQ5VT03 806 aaPredicted RBP9.64□□□□□ -0.87
PDE8A-207ENST00000557954 NUTM2AQ8IVF1 878 aaPredicted RBP9.64□□□□□ -0.87
PDE8A-207ENST00000557954 TSC1Q92574 1164 aa9.64□□□□□ -0.87
PDE8A-207ENST00000557954 TRIM47Q96LD4 638 aa9.64□□□□□ -0.87
PDE8A-207ENST00000557954 BMP1P13497 986 aa9.63□□□□□ -0.87
PDE8A-207ENST00000557954 WASF2Q9Y6W5 498 aa9.63□□□□□ -0.87
PDE8A-207ENST00000557954 MPNDQ8N594 471 aa9.62□□□□□ -0.87
PDE8A-207ENST00000557954 FAM117AQ9C073 453 aa9.62□□□□□ -0.87
PDE8A-207ENST00000557954 KDM4CQ9H3R0 1056 aa9.62□□□□□ -0.87
PDE8A-207ENST00000557954 CAPN5O15484 640 aaPredicted RBP9.61□□□□□ -0.87
PDE8A-207ENST00000557954 NFX1Q12986 1120 aaKnown RBP9.61□□□□□ -0.87
PDE8A-207ENST00000557954 PROCA1Q8NCQ7 364 aaPredicted RBP9.61□□□□□ -0.87
PDE8A-207ENST00000557954 PLEKHG3A1L390 1219 aa9.6□□□□□ -0.87
PDE8A-207ENST00000557954 NNTQ13423 1086 aa9.6□□□□□ -0.87
PDE8A-207ENST00000557954 BCANQ96GW7 911 aa9.6□□□□□ -0.87
PDE8A-207ENST00000557954 KLF16Q9BXK1 252 aaPredicted RBP9.6□□□□□ -0.87
PDE8A-207ENST00000557954 CTDSPL2Q05D32 466 aa9.59□□□□□ -0.87
PDE8A-207ENST00000557954 CDK15Q96Q40 435 aa9.59□□□□□ -0.87
PDE8A-207ENST00000557954 RSPH6AQ9H0K4 717 aa9.59□□□□□ -0.87
PDE8A-207ENST00000557954 SENP2Q9HC62 589 aa9.58□□□□□ -0.88
PDE8A-207ENST00000557954 TIMP2P16035 220 aa9.57□□□□□ -0.88
PDE8A-207ENST00000557954 GRM5P41594 1212 aa9.57□□□□□ -0.88
PDE8A-207ENST00000557954 SKIV2LQ15477 1246 aaKnown RBP9.57□□□□□ -0.88
PDE8A-207ENST00000557954 SH3RF1Q7Z6J0 888 aa9.57□□□□□ -0.88
PDE8A-207ENST00000557954 FAM174AQ8TBP5 190 aa9.57□□□□□ -0.88
PDE8A-207ENST00000557954 NR3C2P08235 984 aa9.56□□□□□ -0.88
PDE8A-207ENST00000557954 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.56□□□□□ -0.88
PDE8A-207ENST00000557954 SLC24A1O60721 1099 aa9.55□□□□□ -0.88
PDE8A-207ENST00000557954 WFS1O76024 890 aa9.55□□□□□ -0.88
PDE8A-207ENST00000557954 ADH1CP00326 375 aa9.55□□□□□ -0.88
PDE8A-207ENST00000557954 SH3D19Q5HYK7 790 aa9.55□□□□□ -0.88
PDE8A-207ENST00000557954 HELBQ8NG08 1087 aaPredicted RBP9.55□□□□□ -0.88
PDE8A-207ENST00000557954 LRRN4Q8WUT4 740 aa9.55□□□□□ -0.88
PDE8A-207ENST00000557954 C1QTNF2Q9BXJ5 285 aa9.55□□□□□ -0.88
PDE8A-207ENST00000557954 ARID5BQ14865 1188 aa9.54□□□□□ -0.88
PDE8A-207ENST00000557954 SH3BP5LQ7L8J4 393 aa9.54□□□□□ -0.88
PDE8A-207ENST00000557954 KIFC2Q96AC6 838 aa9.54□□□□□ -0.88
PDE8A-207ENST00000557954 TERTO14746 1132 aaKnown RBP9.53□□□□□ -0.88
PDE8A-207ENST00000557954 WDR4P57081 412 aaKnown RBP9.53□□□□□ -0.88
PDE8A-207ENST00000557954 AGERQ15109 404 aa9.53□□□□□ -0.88
PDE8A-207ENST00000557954 BPHLQ86WA6 291 aaPredicted RBP9.53□□□□□ -0.88
PDE8A-207ENST00000557954 ZFP42Q96MM3 310 aa9.53□□□□□ -0.88
PDE8A-207ENST00000557954 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
PDE8A-207ENST00000557954 PPP2R2DQ66LE6 453 aa9.52□□□□□ -0.89
PDE8A-207ENST00000557954 ITPKCQ96DU7 683 aa9.51□□□□□ -0.89
PDE8A-207ENST00000557954 ARMC2Q8NEN0 867 aa9.5□□□□□ -0.89
PDE8A-207ENST00000557954 DDRGK1Q96HY6 314 aa9.5□□□□□ -0.89
PDE8A-207ENST00000557954 NR6A1Q15406 480 aa9.49□□□□□ -0.89
PDE8A-207ENST00000557954 MRPL14Q6P1L8 145 aaKnown RBP9.49□□□□□ -0.89
PDE8A-207ENST00000557954 ZIC2O95409 532 aaPredicted RBP9.48□□□□□ -0.89
PDE8A-207ENST00000557954 NR5A1Q13285 461 aa9.48□□□□□ -0.89
PDE8A-207ENST00000557954 TRMT44Q8IYL2 757 aaKnown RBP9.48□□□□□ -0.89
PDE8A-207ENST00000557954 EPS8L1Q8TE68 723 aa9.48□□□□□ -0.89
PDE8A-207ENST00000557954 PURBQ96QR8 312 aaKnown RBP9.48□□□□□ -0.89
PDE8A-207ENST00000557954 OCSTAMPQ9BR26 566 aa9.48□□□□□ -0.89
PDE8A-207ENST00000557954 MAGEB6P1A0A0J9YX57 407 aa9.47□□□□□ -0.89
PDE8A-207ENST00000557954 SOBPA7XYQ1 873 aa9.47□□□□□ -0.89
PDE8A-207ENST00000557954 ERFEQ4G0M1 354 aa9.47□□□□□ -0.89
PDE8A-207ENST00000557954 NBPF14Q5TI25 921 aa9.47□□□□□ -0.89
PDE8A-207ENST00000557954 VEGFBP49765 207 aa9.46□□□□□ -0.9
PDE8A-207ENST00000557954 CARD14Q9BXL6 1004 aa9.46□□□□□ -0.9
PDE8A-207ENST00000557954 WIPF1O43516 503 aa9.45□□□□□ -0.9
PDE8A-207ENST00000557954 FSHRP23945 695 aa9.45□□□□□ -0.9
PDE8A-207ENST00000557954 HMX1Q9NP08 348 aaPredicted RBP9.45□□□□□ -0.9
PDE8A-207ENST00000557954 FKBPLQ9UIM3 349 aa9.45□□□□□ -0.9
PDE8A-207ENST00000557954 MAP4K5Q9Y4K4 846 aa9.45□□□□□ -0.9
PDE8A-207ENST00000557954 AP1G2O75843 785 aa9.44□□□□□ -0.9
PDE8A-207ENST00000557954 PDXDC2PQ6P474 469 aa9.44□□□□□ -0.9
PDE8A-207ENST00000557954 GPKOWQ92917 476 aaPredicted RBP eCLIP9.44□□□□□ -0.9
PDE8A-207ENST00000557954 NXF1Q9UBU9 619 aaKnown RBP9.44□□□□□ -0.9
PDE8A-207ENST00000557954 VASH1Q7L8A9 365 aaPredicted RBP9.43□□□□□ -0.9
PDE8A-207ENST00000557954 RFC5P40937 340 aa9.41□□□□□ -0.9
PDE8A-207ENST00000557954 C6orf118Q5T5N4 469 aa9.41□□□□□ -0.9
PDE8A-207ENST00000557954 MEIOBQ8N635 442 aa9.41□□□□□ -0.9
PDE8A-207ENST00000557954 ATP1B4Q9UN42 357 aaPredicted RBP9.41□□□□□ -0.9
PDE8A-207ENST00000557954 ERBB4Q15303 1308 aa9.4□□□□□ -0.9
PDE8A-207ENST00000557954 USP17L8P0C7I0 530 aa9.4□□□□□ -0.9
PDE8A-207ENST00000557954 SCARF1Q14162 830 aa9.4□□□□□ -0.9
PDE8A-207ENST00000557954 ARHGAP9Q9BRR9 750 aa9.4□□□□□ -0.9
PDE8A-207ENST00000557954 H3BM21 787 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms