RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 PLCD3Q8N3E9 789 aa9.17□□□□□ -0.94
TRPM1-204ENST00000557948 SPOCK2Q92563 424 aa9.17□□□□□ -0.94
TRPM1-204ENST00000557948 SYT17Q9BSW7 474 aa9.17□□□□□ -0.94
TRPM1-204ENST00000557948 FHDC1Q9C0D6 1143 aaPredicted RBP9.17□□□□□ -0.94
TRPM1-204ENST00000557948 DLC1Q96QB1 1528 aa9.16□□□□□ -0.94
TRPM1-204ENST00000557948 SHANK3Q9BYB0 1731 aa9.16□□□□□ -0.94
TRPM1-204ENST00000557948 CASZ1Q86V15 1759 aa9.15□□□□□ -0.94
TRPM1-204ENST00000557948 MIER1Q8N108 512 aa9.15□□□□□ -0.94
TRPM1-204ENST00000557948 NRAPQ86VF7 1730 aa9.14□□□□□ -0.95
TRPM1-204ENST00000557948 PLEKHG5O94827 1062 aa9.14□□□□□ -0.95
TRPM1-204ENST00000557948 ZBTB7AO95365 584 aa9.14□□□□□ -0.95
TRPM1-204ENST00000557948 GPR162Q16538 588 aa9.14□□□□□ -0.95
TRPM1-204ENST00000557948 THSD7AQ9UPZ6 1657 aa9.13□□□□□ -0.95
TRPM1-204ENST00000557948 SPATA31A3Q5VYP0 1347 aa9.13□□□□□ -0.95
TRPM1-204ENST00000557948 PTGER2P43116 358 aa9.13□□□□□ -0.95
TRPM1-204ENST00000557948 PLCB2Q00722 1185 aa9.13□□□□□ -0.95
TRPM1-204ENST00000557948 COL13A1Q5TAT6 717 aaPredicted RBP9.13□□□□□ -0.95
TRPM1-204ENST00000557948 TNS4Q8IZW8 715 aa9.13□□□□□ -0.95
TRPM1-204ENST00000557948 CROCC2H7BZ55 1655 aa9.13□□□□□ -0.95
TRPM1-204ENST00000557948 MYOM3Q5VTT5 1437 aa9.13□□□□□ -0.95
TRPM1-204ENST00000557948 NEXMIFQ5QGS0 1516 aa9.12□□□□□ -0.95
TRPM1-204ENST00000557948 CABLES1Q8TDN4 633 aa9.12□□□□□ -0.95
TRPM1-204ENST00000557948 BTG4Q9NY30 223 aa9.11□□□□□ -0.95
TRPM1-204ENST00000557948 IQGAP3Q86VI3 1631 aa9.11□□□□□ -0.95
TRPM1-204ENST00000557948 ABCA3Q99758 1704 aa9.11□□□□□ -0.95
TRPM1-204ENST00000557948 SPATA31A5Q5VU36 1347 aa9.09□□□□□ -0.95
TRPM1-204ENST00000557948 SPATA31A7Q8IWB4 1347 aa9.09□□□□□ -0.95
TRPM1-204ENST00000557948 CCDC144AA2RUR9 1427 aa9.09□□□□□ -0.95
TRPM1-204ENST00000557948 ECM2O94769 699 aaPredicted RBP9.09□□□□□ -0.95
TRPM1-204ENST00000557948 PDGFDQ9GZP0 370 aaPredicted RBP9.09□□□□□ -0.95
TRPM1-204ENST00000557948 ROBO2Q9HCK4 1378 aa9.09□□□□□ -0.95
TRPM1-204ENST00000557948 CDC42BPGQ6DT37 1551 aa9.08□□□□□ -0.96
TRPM1-204ENST00000557948 GPBP1L1Q9HC44 474 aaPredicted RBP9.08□□□□□ -0.96
TRPM1-204ENST00000557948 TNS3Q68CZ2 1445 aa9.07□□□□□ -0.96
TRPM1-204ENST00000557948 COL14A1Q05707 1796 aaKnown RBP9.07□□□□□ -0.96
TRPM1-204ENST00000557948 PDE3BQ13370 1112 aa9.07□□□□□ -0.96
TRPM1-204ENST00000557948 LMOD2Q6P5Q4 547 aa9.07□□□□□ -0.96
TRPM1-204ENST00000557948 KRT28Q7Z3Y7 464 aa9.07□□□□□ -0.96
TRPM1-204ENST00000557948 KIF1AQ12756 1690 aa9.07□□□□□ -0.96
TRPM1-204ENST00000557948 RGPD3A6NKT7 1758 aaPredicted RBP9.07□□□□□ -0.96
TRPM1-204ENST00000557948 RGPD4Q7Z3J3 1758 aa9.07□□□□□ -0.96
TRPM1-204ENST00000557948 HFM1A2PYH4 1435 aa9.06□□□□□ -0.96
TRPM1-204ENST00000557948 ABCC5O15440 1437 aa9.06□□□□□ -0.96
TRPM1-204ENST00000557948 NUTM2FA1L443 756 aa9.06□□□□□ -0.96
TRPM1-204ENST00000557948 APLP1P51693 650 aa9.06□□□□□ -0.96
TRPM1-204ENST00000557948 ZNF326Q5BKZ1 582 aaKnown RBP9.06□□□□□ -0.96
TRPM1-204ENST00000557948 ANO8Q9HCE9 1232 aaPredicted RBP9.06□□□□□ -0.96
TRPM1-204ENST00000557948 ANKRD30AQ9BXX3 1397 aa9.06□□□□□ -0.96
TRPM1-204ENST00000557948 ATP10DQ9P241 1426 aa9.05□□□□□ -0.96
TRPM1-204ENST00000557948 GOLGB1Q14789 3259 aaKnown RBP9.05□□□□□ -0.96
TRPM1-204ENST00000557948 E9PCH4 1651 aa9.05□□□□□ -0.96
TRPM1-204ENST00000557948 MAP3K5Q99683 1374 aa9.05□□□□□ -0.96
TRPM1-204ENST00000557948 PSME1Q06323 249 aa9.05□□□□□ -0.96
TRPM1-204ENST00000557948 ARXQ96QS3 562 aa9.05□□□□□ -0.96
TRPM1-204ENST00000557948 BCL11BQ9C0K0 894 aaPredicted RBP9.05□□□□□ -0.96
TRPM1-204ENST00000557948 MTFR1LQ9H019 292 aa9.05□□□□□ -0.96
TRPM1-204ENST00000557948 RRBP1Q9P2E9 1410 aaKnown RBP9.05□□□□□ -0.96
TRPM1-204ENST00000557948 ARHGEF10O15013 1369 aa9.04□□□□□ -0.96
TRPM1-204ENST00000557948 RGL2O15211 777 aa9.03□□□□□ -0.96
TRPM1-204ENST00000557948 DNAJC5GQ8N7S2 189 aa9.03□□□□□ -0.96
TRPM1-204ENST00000557948 CHIC2Q9UKJ5 165 aa9.03□□□□□ -0.96
TRPM1-204ENST00000557948 DAPK1P53355 1430 aa9.03□□□□□ -0.96
TRPM1-204ENST00000557948 SPATA31A1Q5TZJ5 1347 aa9.03□□□□□ -0.96
TRPM1-204ENST00000557948 ZNF526Q8TF50 670 aaPredicted RBP9.02□□□□□ -0.97
TRPM1-204ENST00000557948 SGIP1Q9BQI5 828 aa9.02□□□□□ -0.97
TRPM1-204ENST00000557948 STK32BQ9NY57 414 aa9.02□□□□□ -0.97
TRPM1-204ENST00000557948 PLSCR1O15162 318 aa9.01□□□□□ -0.97
TRPM1-204ENST00000557948 NAIPQ13075 1403 aa9.01□□□□□ -0.97
TRPM1-204ENST00000557948 PRAG1Q86YV5 1406 aa9.01□□□□□ -0.97
TRPM1-204ENST00000557948 WWC3Q9ULE0 1092 aa9.01□□□□□ -0.97
TRPM1-204ENST00000557948 SBNO1A3KN83 1393 aa9□□□□□ -0.97
TRPM1-204ENST00000557948 AATKQ6ZMQ8 1374 aa9□□□□□ -0.97
TRPM1-204ENST00000557948 C11orf95C9JLR9 678 aaPredicted RBP9□□□□□ -0.97
TRPM1-204ENST00000557948 GRIN3BO60391 1043 aa9□□□□□ -0.97
TRPM1-204ENST00000557948 USP35Q9P2H5 1018 aa9□□□□□ -0.97
TRPM1-204ENST00000557948 CIZ1Q9ULV3 898 aaPredicted RBP9□□□□□ -0.97
TRPM1-204ENST00000557948 FMN2Q9NZ56 1722 aa8.99□□□□□ -0.97
TRPM1-204ENST00000557948 RGPD8O14715 1765 aaPredicted RBP8.99□□□□□ -0.97
TRPM1-204ENST00000557948 SBF2Q86WG5 1849 aa8.98□□□□□ -0.97
TRPM1-204ENST00000557948 WDR90Q96KV7 1748 aa8.98□□□□□ -0.97
TRPM1-204ENST00000557948 SLC15A2Q16348 729 aa8.98□□□□□ -0.97
TRPM1-204ENST00000557948 PRDM11Q9NQV5 511 aa8.98□□□□□ -0.97
TRPM1-204ENST00000557948 STRN4Q9NRL3 753 aa8.98□□□□□ -0.97
TRPM1-204ENST00000557948 TECPR2O15040 1411 aa8.97□□□□□ -0.97
TRPM1-204ENST00000557948 ANKRD50Q9ULJ7 1429 aa8.97□□□□□ -0.97
TRPM1-204ENST00000557948 BARGINQ6ZT62 677 aa8.97□□□□□ -0.97
TRPM1-204ENST00000557948 PHF8Q9UPP1 1060 aa8.97□□□□□ -0.97
TRPM1-204ENST00000557948 JMYQ8N9B5 988 aa8.96□□□□□ -0.98
TRPM1-204ENST00000557948 KLRG1Q96E93 195 aa8.96□□□□□ -0.98
TRPM1-204ENST00000557948 YBX3P16989 372 aaKnown RBP eCLIP8.95□□□□□ -0.98
TRPM1-204ENST00000557948 ZBTB47Q9UFB7 747 aaPredicted RBP8.95□□□□□ -0.98
TRPM1-204ENST00000557948 OVOS2A0A0G2JMS6 1433 aa8.95□□□□□ -0.98
TRPM1-204ENST00000557948 OVOS2A0A0J9YW53 1432 aa8.95□□□□□ -0.98
TRPM1-204ENST00000557948 OVOS2Q6IE36 1432 aa8.95□□□□□ -0.98
TRPM1-204ENST00000557948 EVA1CP58658 441 aa8.94□□□□□ -0.98
TRPM1-204ENST00000557948 BBXQ8WY36 941 aaPredicted RBP8.94□□□□□ -0.98
TRPM1-204ENST00000557948 ADCY9O60503 1353 aa8.94□□□□□ -0.98
TRPM1-204ENST00000557948 PCNTO95613 3336 aa8.94□□□□□ -0.98
TRPM1-204ENST00000557948 PARP4Q9UKK3 1724 aaKnown RBP8.94□□□□□ -0.98
TRPM1-204ENST00000557948 KIF3CO14782 793 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms