RNA–Protein interactions for RNA: ENST00000557820.5

PKNOX1-207, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 4

Gene PKNOX1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-207ENST00000557820 NGLY1Q96IV0 654 aa9.01□□□□□ -0.97
PKNOX1-207ENST00000557820 ABCA3Q99758 1704 aa9.01□□□□□ -0.97
PKNOX1-207ENST00000557820 ACEP12821 1306 aa9.01□□□□□ -0.97
PKNOX1-207ENST00000557820 SBNO1A3KN83 1393 aa9□□□□□ -0.97
PKNOX1-207ENST00000557820 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
PKNOX1-207ENST00000557820 ALS2Q96Q42 1657 aa9□□□□□ -0.97
PKNOX1-207ENST00000557820 SOCS7O14512 581 aa8.99□□□□□ -0.97
PKNOX1-207ENST00000557820 CABP1Q9NZU7 370 aa8.99□□□□□ -0.97
PKNOX1-207ENST00000557820 CCDC61Q9Y6R9 512 aa8.99□□□□□ -0.97
PKNOX1-207ENST00000557820 EVC2Q86UK5 1308 aa8.99□□□□□ -0.97
PKNOX1-207ENST00000557820 POLR3AO14802 1390 aaPredicted RBP8.99□□□□□ -0.97
PKNOX1-207ENST00000557820 ZNF772Q68DY9 489 aaPredicted RBP8.98□□□□□ -0.97
PKNOX1-207ENST00000557820 USP21Q9UK80 565 aa8.98□□□□□ -0.97
PKNOX1-207ENST00000557820 ARHGEF10O15013 1369 aa8.98□□□□□ -0.97
PKNOX1-207ENST00000557820 ST20-MTHFSA0A0A6YYL1 179 aa8.97□□□□□ -0.97
PKNOX1-207ENST00000557820 PLEKHG3A1L390 1219 aa8.97□□□□□ -0.97
PKNOX1-207ENST00000557820 USP47Q96K76 1375 aa8.97□□□□□ -0.97
PKNOX1-207ENST00000557820 MARF1Q9Y4F3 1742 aaKnown RBP8.97□□□□□ -0.97
PKNOX1-207ENST00000557820 CRYBG1Q9Y4K1 1723 aa8.97□□□□□ -0.97
PKNOX1-207ENST00000557820 RGS12O14924 1447 aa8.97□□□□□ -0.97
PKNOX1-207ENST00000557820 BCL9LQ86UU0 1499 aa8.96□□□□□ -0.97
PKNOX1-207ENST00000557820 TESK2Q96S53 571 aa8.96□□□□□ -0.98
PKNOX1-207ENST00000557820 QTRT2Q9H974 415 aaKnown RBP8.96□□□□□ -0.98
PKNOX1-207ENST00000557820 PLCH1Q4KWH8 1693 aa8.96□□□□□ -0.98
PKNOX1-207ENST00000557820 USP6P35125 1406 aa8.96□□□□□ -0.98
PKNOX1-207ENST00000557820 PHRF1Q9P1Y6 1649 aaKnown RBP8.95□□□□□ -0.98
PKNOX1-207ENST00000557820 FAM83GA6ND36 823 aa8.95□□□□□ -0.98
PKNOX1-207ENST00000557820 RXRBP28702 533 aa8.95□□□□□ -0.98
PKNOX1-207ENST00000557820 CHRNA2Q15822 529 aa8.95□□□□□ -0.98
PKNOX1-207ENST00000557820 ATRNO75882 1429 aa8.95□□□□□ -0.98
PKNOX1-207ENST00000557820 SLIT2O94813 1529 aa8.95□□□□□ -0.98
PKNOX1-207ENST00000557820 NRKQ7Z2Y5 1582 aa8.95□□□□□ -0.98
PKNOX1-207ENST00000557820 ZBTB7CA1YPR0 619 aa8.94□□□□□ -0.98
PKNOX1-207ENST00000557820 SOX12O15370 315 aa8.94□□□□□ -0.98
PKNOX1-207ENST00000557820 SLC4A2P04920 1241 aa8.94□□□□□ -0.98
PKNOX1-207ENST00000557820 ZC3H6P61129 1189 aaKnown RBP8.94□□□□□ -0.98
PKNOX1-207ENST00000557820 FNBP4Q8N3X1 1017 aaPredicted RBP8.94□□□□□ -0.98
PKNOX1-207ENST00000557820 ABTB2Q8N961 1025 aa8.94□□□□□ -0.98
PKNOX1-207ENST00000557820 TMC1Q8TDI8 760 aa8.94□□□□□ -0.98
PKNOX1-207ENST00000557820 SLC12A5Q9H2X9 1139 aa8.94□□□□□ -0.98
PKNOX1-207ENST00000557820 ZRANB1Q9UGI0 708 aa8.94□□□□□ -0.98
PKNOX1-207ENST00000557820 CLSPNQ9HAW4 1339 aa8.94□□□□□ -0.98
PKNOX1-207ENST00000557820 SBNO2Q9Y2G9 1366 aa8.94□□□□□ -0.98
PKNOX1-207ENST00000557820 CD163L1Q9NR16 1453 aa8.94□□□□□ -0.98
PKNOX1-207ENST00000557820 ZBTB22O15209 634 aa8.93□□□□□ -0.98
PKNOX1-207ENST00000557820 ATAD2Q6PL18 1390 aa8.93□□□□□ -0.98
PKNOX1-207ENST00000557820 KIAA0232Q92628 1395 aa8.93□□□□□ -0.98
PKNOX1-207ENST00000557820 GLI3P10071 1580 aa8.93□□□□□ -0.98
PKNOX1-207ENST00000557820 PIK3C2AO00443 1686 aa8.93□□□□□ -0.98
PKNOX1-207ENST00000557820 AKAP12Q02952 1782 aa8.92□□□□□ -0.98
PKNOX1-207ENST00000557820 SSH2Q76I76 1423 aa8.92□□□□□ -0.98
PKNOX1-207ENST00000557820 KTN1Q86UP2 1357 aaKnown RBP8.92□□□□□ -0.98
PKNOX1-207ENST00000557820 RBM6P78332 1123 aaKnown RBP8.92□□□□□ -0.98
PKNOX1-207ENST00000557820 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.92□□□□□ -0.98
PKNOX1-207ENST00000557820 PRDM11Q9NQV5 511 aa8.92□□□□□ -0.98
PKNOX1-207ENST00000557820 TRPC5Q9UL62 973 aaPredicted RBP8.92□□□□□ -0.98
PKNOX1-207ENST00000557820 CCDC9Q9Y3X0 531 aaKnown RBP8.92□□□□□ -0.98
PKNOX1-207ENST00000557820 NRAPQ86VF7 1730 aa8.91□□□□□ -0.98
PKNOX1-207ENST00000557820 CPSF1Q10570 1443 aaKnown RBP8.91□□□□□ -0.98
PKNOX1-207ENST00000557820 A0A1W2PP64 1363 aa8.91□□□□□ -0.98
PKNOX1-207ENST00000557820 USP19O94966 1318 aa8.91□□□□□ -0.98
PKNOX1-207ENST00000557820 TTC21BQ7Z4L5 1316 aa8.91□□□□□ -0.98
PKNOX1-207ENST00000557820 NME9Q86XW9 330 aa8.91□□□□□ -0.98
PKNOX1-207ENST00000557820 UNC5CLQ8IV45 518 aa8.91□□□□□ -0.98
PKNOX1-207ENST00000557820 BTG4Q9NY30 223 aa8.91□□□□□ -0.98
PKNOX1-207ENST00000557820 MON2Q7Z3U7 1717 aa8.91□□□□□ -0.98
PKNOX1-207ENST00000557820 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.91□□□□□ -0.98
PKNOX1-207ENST00000557820 NLRP6P59044 892 aa8.9□□□□□ -0.98
PKNOX1-207ENST00000557820 GJD4Q96KN9 370 aaPredicted RBP8.9□□□□□ -0.98
PKNOX1-207ENST00000557820 STRN4Q9NRL3 753 aa8.9□□□□□ -0.98
PKNOX1-207ENST00000557820 COL14A1Q05707 1796 aaKnown RBP8.9□□□□□ -0.98
PKNOX1-207ENST00000557820 CDK12Q9NYV4 1490 aaPredicted RBP8.89□□□□□ -0.99
PKNOX1-207ENST00000557820 HSPA5P11021 654 aaKnown RBP8.89□□□□□ -0.99
PKNOX1-207ENST00000557820 POLR3GLQ9BT43 218 aa8.89□□□□□ -0.99
PKNOX1-207ENST00000557820 SPINK5Q9NQ38 1064 aaPredicted RBP8.89□□□□□ -0.99
PKNOX1-207ENST00000557820 TIMELESSQ9UNS1 1208 aa8.89□□□□□ -0.99
PKNOX1-207ENST00000557820 SLIT3O75094 1523 aa8.89□□□□□ -0.99
PKNOX1-207ENST00000557820 NWD2Q9ULI1 1742 aa8.88□□□□□ -0.99
PKNOX1-207ENST00000557820 A0A0G2JS52 829 aa8.88□□□□□ -0.99
PKNOX1-207ENST00000557820 GCP02774 474 aa8.88□□□□□ -0.99
PKNOX1-207ENST00000557820 TMF1P82094 1093 aa8.88□□□□□ -0.99
PKNOX1-207ENST00000557820 MYT1Q01538 1121 aa8.88□□□□□ -0.99
PKNOX1-207ENST00000557820 NLRP13Q86W25 1043 aa8.88□□□□□ -0.99
PKNOX1-207ENST00000557820 MYOM1P52179 1685 aa8.88□□□□□ -0.99
PKNOX1-207ENST00000557820 CAMTA1Q9Y6Y1 1673 aa8.88□□□□□ -0.99
PKNOX1-207ENST00000557820 VPS72Q15906 364 aa8.87□□□□□ -0.99
PKNOX1-207ENST00000557820 FAM98CQ17RN3 349 aaKnown RBP8.87□□□□□ -0.99
PKNOX1-207ENST00000557820 HDGFL2Q7Z4V5 671 aaPredicted RBP8.87□□□□□ -0.99
PKNOX1-207ENST00000557820 USP35Q9P2H5 1018 aa8.87□□□□□ -0.99
PKNOX1-207ENST00000557820 LMO7Q8WWI1 1683 aa8.87□□□□□ -0.99
PKNOX1-207ENST00000557820 NFAT5O94916 1531 aa8.86□□□□□ -0.99
PKNOX1-207ENST00000557820 FAM182BQ5T319 152 aa8.86□□□□□ -0.99
PKNOX1-207ENST00000557820 LARP1Q6PKG0 1096 aaKnown RBP8.86□□□□□ -0.99
PKNOX1-207ENST00000557820 SEPT12Q8IYM1 358 aa8.86□□□□□ -0.99
PKNOX1-207ENST00000557820 ZNF692Q9BU19 519 aaPredicted RBP8.86□□□□□ -0.99
PKNOX1-207ENST00000557820 EDC4Q6P2E9 1401 aaKnown RBP8.86□□□□□ -0.99
PKNOX1-207ENST00000557820 BRD4O60885 1362 aaPredicted RBP8.86□□□□□ -0.99
PKNOX1-207ENST00000557820 CPDO75976 1380 aa8.86□□□□□ -0.99
PKNOX1-207ENST00000557820 SPATA31A5Q5VU36 1347 aa8.85□□□□□ -0.99
PKNOX1-207ENST00000557820 SPATA31A7Q8IWB4 1347 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms