RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 CCDC9Q9Y3X0 531 aaKnown RBP31.12■■■□□ 2.57
CRNDE-203ENST00000557792 NUDT16Q96DE0 195 aaKnown RBP31.11■■■□□ 2.57
CRNDE-203ENST00000557792 CENPJQ9HC77 1338 aaPredicted RBP31.11■■■□□ 2.57
CRNDE-203ENST00000557792 NRAPQ86VF7 1730 aa31.1■■■□□ 2.57
CRNDE-203ENST00000557792 TONSLQ96HA7 1378 aa31.1■■■□□ 2.57
CRNDE-203ENST00000557792 PCGF6Q9BYE7 350 aa31.1■■■□□ 2.57
CRNDE-203ENST00000557792 ZRANB1Q9UGI0 708 aa31.1■■■□□ 2.57
CRNDE-203ENST00000557792 BLMP54132 1417 aaPredicted RBP31.09■■■□□ 2.57
CRNDE-203ENST00000557792 ONECUT3O60422 494 aaPredicted RBP31.09■■■□□ 2.57
CRNDE-203ENST00000557792 NGDNQ8NEJ9 315 aaKnown RBP31.09■■■□□ 2.57
CRNDE-203ENST00000557792 ROCK2O75116 1388 aaKnown RBP31.08■■■□□ 2.57
CRNDE-203ENST00000557792 ITSN1Q15811 1721 aa31.07■■■□□ 2.56
CRNDE-203ENST00000557792 CRYBG1Q9Y4K1 1723 aa31.07■■■□□ 2.56
CRNDE-203ENST00000557792 COL14A1Q05707 1796 aaKnown RBP31.06■■■□□ 2.56
CRNDE-203ENST00000557792 ATP7BP35670 1465 aa31.06■■■□□ 2.56
CRNDE-203ENST00000557792 BTG4Q9NY30 223 aa31.05■■■□□ 2.56
CRNDE-203ENST00000557792 TRPM1Q7Z4N2 1603 aa31.05■■■□□ 2.56
CRNDE-203ENST00000557792 PAK3O75914 559 aaPredicted RBP31.03■■■□□ 2.56
CRNDE-203ENST00000557792 KRT27Q7Z3Y8 459 aa31.02■■■□□ 2.56
CRNDE-203ENST00000557792 CCDC61Q9Y6R9 512 aa31.02■■■□□ 2.56
CRNDE-203ENST00000557792 SRPK2P78362 688 aaKnown RBP30.99■■■□□ 2.55
CRNDE-203ENST00000557792 DEFB132Q7Z7B7 95 aa30.99■■■□□ 2.55
CRNDE-203ENST00000557792 FAM98CQ17RN3 349 aaKnown RBP30.98■■■□□ 2.55
CRNDE-203ENST00000557792 CABP2Q9NPB3 220 aa30.98■■■□□ 2.55
CRNDE-203ENST00000557792 A0A0G2JS52 829 aa30.97■■■□□ 2.55
CRNDE-203ENST00000557792 MYT1Q01538 1121 aa30.97■■■□□ 2.55
CRNDE-203ENST00000557792 SF3B2Q13435 895 aaKnown RBP30.97■■■□□ 2.55
CRNDE-203ENST00000557792 PLEKHG3A1L390 1219 aa30.96■■■□□ 2.55
CRNDE-203ENST00000557792 CARD11Q9BXL7 1154 aa30.96■■■□□ 2.55
CRNDE-203ENST00000557792 TOPAZ1Q8N9V7 1692 aa30.96■■■□□ 2.55
CRNDE-203ENST00000557792 PRDM11Q9NQV5 511 aa30.94■■■□□ 2.54
CRNDE-203ENST00000557792 ACEP12821 1306 aa30.93■■■□□ 2.54
CRNDE-203ENST00000557792 SPATA31A5Q5VU36 1347 aa30.93■■■□□ 2.54
CRNDE-203ENST00000557792 SPATA31A7Q8IWB4 1347 aa30.93■■■□□ 2.54
CRNDE-203ENST00000557792 PHRF1Q9P1Y6 1649 aaKnown RBP30.92■■■□□ 2.54
CRNDE-203ENST00000557792 POLR3AO14802 1390 aaPredicted RBP30.92■■■□□ 2.54
CRNDE-203ENST00000557792 EVC2Q86UK5 1308 aa30.9■■■□□ 2.54
CRNDE-203ENST00000557792 KIAA0232Q92628 1395 aa30.9■■■□□ 2.54
CRNDE-203ENST00000557792 QRICH2Q9H0J4 1663 aa30.89■■■□□ 2.54
CRNDE-203ENST00000557792 NUTM2GQ5VZR2 741 aa30.88■■■□□ 2.53
CRNDE-203ENST00000557792 THSD7AQ9UPZ6 1657 aa30.87■■■□□ 2.53
CRNDE-203ENST00000557792 CHRNA2Q15822 529 aa30.86■■■□□ 2.53
CRNDE-203ENST00000557792 CABP1Q9NZU7 370 aa30.86■■■□□ 2.53
CRNDE-203ENST00000557792 PPIP5K1Q6PFW1 1433 aa30.85■■■□□ 2.53
CRNDE-203ENST00000557792 CLSPNQ9HAW4 1339 aa30.84■■■□□ 2.53
CRNDE-203ENST00000557792 ZC3H6P61129 1189 aaKnown RBP30.84■■■□□ 2.53
CRNDE-203ENST00000557792 SPATA31A1Q5TZJ5 1347 aa30.82■■■□□ 2.52
CRNDE-203ENST00000557792 FAM182BQ5T319 152 aa30.82■■■□□ 2.52
CRNDE-203ENST00000557792 BAG6P46379 1132 aa30.81■■■□□ 2.52
CRNDE-203ENST00000557792 STRN4Q9NRL3 753 aa30.8■■■□□ 2.52
CRNDE-203ENST00000557792 RGPD1P0DJD0 1748 aa30.8■■■□□ 2.52
CRNDE-203ENST00000557792 ABTB2Q8N961 1025 aa30.79■■■□□ 2.52
CRNDE-203ENST00000557792 NRKQ7Z2Y5 1582 aa30.79■■■□□ 2.52
CRNDE-203ENST00000557792 TIMELESSQ9UNS1 1208 aa30.77■■■□□ 2.52
CRNDE-203ENST00000557792 SBNO2Q9Y2G9 1366 aa30.77■■■□□ 2.52
CRNDE-203ENST00000557792 USP19O94966 1318 aa30.74■■■□□ 2.51
CRNDE-203ENST00000557792 CCER1Q8TC90 406 aaPredicted RBP30.73■■■□□ 2.51
CRNDE-203ENST00000557792 TNS1Q9HBL0 1735 aaKnown RBP30.73■■■□□ 2.51
CRNDE-203ENST00000557792 SSH2Q76I76 1423 aa30.73■■■□□ 2.51
CRNDE-203ENST00000557792 CAMTA1Q9Y6Y1 1673 aa30.72■■■□□ 2.51
CRNDE-203ENST00000557792 CPDO75976 1380 aa30.72■■■□□ 2.51
CRNDE-203ENST00000557792 EVA1CP58658 441 aa30.72■■■□□ 2.51
CRNDE-203ENST00000557792 EN1Q05925 392 aaPredicted RBP30.72■■■□□ 2.51
CRNDE-203ENST00000557792 LMO7Q8WWI1 1683 aa30.71■■■□□ 2.51
CRNDE-203ENST00000557792 ST20-MTHFSA0A0A6YYL1 179 aa30.71■■■□□ 2.51
CRNDE-203ENST00000557792 USP35Q9P2H5 1018 aa30.71■■■□□ 2.51
CRNDE-203ENST00000557792 NLRP13Q86W25 1043 aa30.7■■■□□ 2.51
CRNDE-203ENST00000557792 DISP2A7MBM2 1401 aa30.68■■■□□ 2.5
CRNDE-203ENST00000557792 USP6P35125 1406 aa30.68■■■□□ 2.5
CRNDE-203ENST00000557792 PSDA5PKW4 1024 aaPredicted RBP30.68■■■□□ 2.5
CRNDE-203ENST00000557792 TESK2Q96S53 571 aa30.68■■■□□ 2.5
CRNDE-203ENST00000557792 ZNF692Q9BU19 519 aaPredicted RBP30.68■■■□□ 2.5
CRNDE-203ENST00000557792 BRD4O60885 1362 aaPredicted RBP30.67■■■□□ 2.5
CRNDE-203ENST00000557792 GCP02774 474 aa30.67■■■□□ 2.5
CRNDE-203ENST00000557792 LARP1Q6PKG0 1096 aaKnown RBP30.67■■■□□ 2.5
CRNDE-203ENST00000557792 BARGINQ6ZT62 677 aa30.67■■■□□ 2.5
CRNDE-203ENST00000557792 LRP5O75197 1615 aa30.66■■■□□ 2.5
CRNDE-203ENST00000557792 FAM196AQ6ZSG2 479 aa30.66■■■□□ 2.5
CRNDE-203ENST00000557792 TRIM37O94972 964 aa30.63■■■□□ 2.49
CRNDE-203ENST00000557792 TCP11L2Q8N4U5 519 aa30.62■■■□□ 2.49
CRNDE-203ENST00000557792 PUS7Q96PZ0 661 aaKnown RBP30.61■■■□□ 2.49
CRNDE-203ENST00000557792 COL5A2P05997 1499 aaPredicted RBP30.6■■■□□ 2.49
CRNDE-203ENST00000557792 NLRP6P59044 892 aa30.6■■■□□ 2.49
CRNDE-203ENST00000557792 CPSF1Q10570 1443 aaKnown RBP30.6■■■□□ 2.49
CRNDE-203ENST00000557792 PDE3BQ13370 1112 aa30.6■■■□□ 2.49
CRNDE-203ENST00000557792 EZH2Q15910 746 aaKnown RBP30.6■■■□□ 2.49
CRNDE-203ENST00000557792 TTC21BQ7Z4L5 1316 aa30.6■■■□□ 2.49
CRNDE-203ENST00000557792 TMC1Q8TDI8 760 aa30.6■■■□□ 2.49
CRNDE-203ENST00000557792 SLC12A5Q9H2X9 1139 aa30.6■■■□□ 2.49
CRNDE-203ENST00000557792 SLIT3O75094 1523 aa30.58■■■□□ 2.49
CRNDE-203ENST00000557792 USP47Q96K76 1375 aa30.58■■■□□ 2.49
CRNDE-203ENST00000557792 SLC24A1O60721 1099 aa30.58■■■□□ 2.49
CRNDE-203ENST00000557792 CAMKK2Q96RR4 588 aa30.57■■■□□ 2.48
CRNDE-203ENST00000557792 THRAP3Q9Y2W1 955 aaKnown RBP30.57■■■□□ 2.48
CRNDE-203ENST00000557792 PIK3C2AO00443 1686 aa30.57■■■□□ 2.48
CRNDE-203ENST00000557792 KTN1Q86UP2 1357 aaKnown RBP30.56■■■□□ 2.48
CRNDE-203ENST00000557792 ZBTB7CA1YPR0 619 aa30.55■■■□□ 2.48
CRNDE-203ENST00000557792 R3HDM1Q15032 1099 aaKnown RBP30.55■■■□□ 2.48
CRNDE-203ENST00000557792 PARP4Q9UKK3 1724 aaKnown RBP30.54■■■□□ 2.48
CRNDE-203ENST00000557792 APBA3O96018 575 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms