RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 IRF5Q13568 498 aa8.34□□□□□ -1.07
EFCAB11-213ENST00000557685 MSS51Q4VC12 460 aa8.34□□□□□ -1.07
EFCAB11-213ENST00000557685 CCDC82Q8N4S0 544 aa8.34□□□□□ -1.07
EFCAB11-213ENST00000557685 SPSB2Q99619 263 aa8.34□□□□□ -1.07
EFCAB11-213ENST00000557685 SERPINA10Q9UK55 444 aa8.34□□□□□ -1.07
EFCAB11-213ENST00000557685 RNF223E7ERA6 249 aa8.33□□□□□ -1.08
EFCAB11-213ENST00000557685 GPR37L1O60883 481 aa8.33□□□□□ -1.08
EFCAB11-213ENST00000557685 JUNDP17535 347 aa8.33□□□□□ -1.08
EFCAB11-213ENST00000557685 SLC19A1P41440 591 aa8.33□□□□□ -1.08
EFCAB11-213ENST00000557685 PTPRNQ16849 979 aa8.33□□□□□ -1.08
EFCAB11-213ENST00000557685 FAM160A2Q8N612 972 aaPredicted RBP8.33□□□□□ -1.08
EFCAB11-213ENST00000557685 PNMA1Q8ND90 353 aa8.33□□□□□ -1.08
EFCAB11-213ENST00000557685 TLL1O43897 1013 aa8.31□□□□□ -1.08
EFCAB11-213ENST00000557685 CCDC97Q96F63 343 aaPredicted RBP8.31□□□□□ -1.08
EFCAB11-213ENST00000557685 DXOO77932 396 aaKnown RBP8.3□□□□□ -1.08
EFCAB11-213ENST00000557685 F12P00748 615 aaPredicted RBP8.3□□□□□ -1.08
EFCAB11-213ENST00000557685 MMP16P51512 607 aa8.3□□□□□ -1.08
EFCAB11-213ENST00000557685 CALR3Q96L12 384 aaKnown RBP8.3□□□□□ -1.08
EFCAB11-213ENST00000557685 POM121CA8CG34 1229 aa8.29□□□□□ -1.08
EFCAB11-213ENST00000557685 ADH1BP00325 375 aa8.29□□□□□ -1.08
EFCAB11-213ENST00000557685 PKDCCQ504Y2 493 aa8.29□□□□□ -1.08
EFCAB11-213ENST00000557685 EVA1BQ9NVM1 165 aa8.29□□□□□ -1.08
EFCAB11-213ENST00000557685 PPEF1O14829 653 aaPredicted RBP8.28□□□□□ -1.08
EFCAB11-213ENST00000557685 HDGFL1Q5TGJ6 251 aa8.28□□□□□ -1.08
EFCAB11-213ENST00000557685 ANKLE1Q8NAG6 615 aa8.28□□□□□ -1.08
EFCAB11-213ENST00000557685 GLMNQ92990 594 aa8.28□□□□□ -1.08
EFCAB11-213ENST00000557685 S1PR4O95977 384 aa8.27□□□□□ -1.09
EFCAB11-213ENST00000557685 CCNYL3P0C7X3 344 aa8.27□□□□□ -1.09
EFCAB11-213ENST00000557685 VAC14Q08AM6 782 aa8.27□□□□□ -1.09
EFCAB11-213ENST00000557685 SPRYD7Q5W111 196 aa8.27□□□□□ -1.09
EFCAB11-213ENST00000557685 TRIM67Q6ZTA4 783 aa8.27□□□□□ -1.09
EFCAB11-213ENST00000557685 ZNF598Q86UK7 904 aaKnown RBP8.27□□□□□ -1.09
EFCAB11-213ENST00000557685 EMID1Q96A84 441 aaPredicted RBP8.27□□□□□ -1.09
EFCAB11-213ENST00000557685 FKBPLQ9UIM3 349 aa8.27□□□□□ -1.09
EFCAB11-213ENST00000557685 ZC3H4Q9UPT8 1303 aaKnown RBP8.27□□□□□ -1.09
EFCAB11-213ENST00000557685 CTHP32929 405 aa8.26□□□□□ -1.09
EFCAB11-213ENST00000557685 SOX11P35716 441 aa8.26□□□□□ -1.09
EFCAB11-213ENST00000557685 KCNH2Q12809 1159 aa8.26□□□□□ -1.09
EFCAB11-213ENST00000557685 ZNF775Q96BV0 537 aaPredicted RBP8.26□□□□□ -1.09
EFCAB11-213ENST00000557685 NUDT12Q9BQG2 462 aa8.26□□□□□ -1.09
EFCAB11-213ENST00000557685 MAP10Q9P2G4 905 aa8.26□□□□□ -1.09
EFCAB11-213ENST00000557685 DGAT1O75907 488 aa8.25□□□□□ -1.09
EFCAB11-213ENST00000557685 ZNF697Q5TEC3 545 aa8.25□□□□□ -1.09
EFCAB11-213ENST00000557685 ARMC2Q8NEN0 867 aa8.25□□□□□ -1.09
EFCAB11-213ENST00000557685 SLC6A16Q9GZN6 736 aa8.25□□□□□ -1.09
EFCAB11-213ENST00000557685 ALG2Q9H553 416 aa8.25□□□□□ -1.09
EFCAB11-213ENST00000557685 LIAT1Q6ZQX7 453 aa8.24□□□□□ -1.09
EFCAB11-213ENST00000557685 PRDM9Q9NQV7 894 aa8.24□□□□□ -1.09
EFCAB11-213ENST00000557685 FAM187AA6NFU0 413 aa8.23□□□□□ -1.09
EFCAB11-213ENST00000557685 EIF4G2P78344 907 aaKnown RBP eCLIP8.23□□□□□ -1.09
EFCAB11-213ENST00000557685 PRR20EP86478 221 aa8.23□□□□□ -1.09
EFCAB11-213ENST00000557685 PRR20CP86479 221 aa8.23□□□□□ -1.09
EFCAB11-213ENST00000557685 PRR20DP86480 221 aa8.23□□□□□ -1.09
EFCAB11-213ENST00000557685 PRR20BP86481 221 aa8.23□□□□□ -1.09
EFCAB11-213ENST00000557685 PRR20AP86496 221 aa8.23□□□□□ -1.09
EFCAB11-213ENST00000557685 MYT1Q01538 1121 aa8.23□□□□□ -1.09
EFCAB11-213ENST00000557685 NR1H3Q13133 447 aa8.23□□□□□ -1.09
EFCAB11-213ENST00000557685 ADAMTS19Q8TE59 1207 aa8.23□□□□□ -1.09
EFCAB11-213ENST00000557685 GPKOWQ92917 476 aaPredicted RBP eCLIP8.23□□□□□ -1.09
EFCAB11-213ENST00000557685 ZBBXA8MT70 800 aa8.22□□□□□ -1.09
EFCAB11-213ENST00000557685 SEMA3FQ13275 785 aa8.22□□□□□ -1.09
EFCAB11-213ENST00000557685 GPSM3Q9Y4H4 160 aa8.22□□□□□ -1.09
EFCAB11-213ENST00000557685 TNFRSF10AO00220 468 aa8.21□□□□□ -1.1
EFCAB11-213ENST00000557685 PDXDC2PQ6P474 469 aa8.21□□□□□ -1.1
EFCAB11-213ENST00000557685 FBXO45P0C2W1 286 aa8.2□□□□□ -1.1
EFCAB11-213ENST00000557685 CCDC24Q8N4L8 307 aa8.2□□□□□ -1.1
EFCAB11-213ENST00000557685 PTK2Q05397 1052 aa8.19□□□□□ -1.1
EFCAB11-213ENST00000557685 NBPF14Q5TI25 921 aa8.19□□□□□ -1.1
EFCAB11-213ENST00000557685 PTCRAQ6ISU1 281 aaPredicted RBP8.19□□□□□ -1.1
EFCAB11-213ENST00000557685 GDF9O60383 454 aa8.18□□□□□ -1.1
EFCAB11-213ENST00000557685 PPP1R15AO75807 674 aaPredicted RBP8.18□□□□□ -1.1
EFCAB11-213ENST00000557685 ZNF592Q92610 1267 aa8.18□□□□□ -1.1
EFCAB11-213ENST00000557685 UNC93B1Q9H1C4 597 aa8.18□□□□□ -1.1
EFCAB11-213ENST00000557685 MCCD1P59942 119 aaPredicted RBP8.17□□□□□ -1.1
EFCAB11-213ENST00000557685 PPP1R12CQ9BZL4 782 aa8.17□□□□□ -1.1
EFCAB11-213ENST00000557685 POTECB2RU33 542 aa8.16□□□□□ -1.1
EFCAB11-213ENST00000557685 FOXC1Q12948 553 aa8.16□□□□□ -1.1
EFCAB11-213ENST00000557685 PLA2G2CQ5R387 149 aa8.16□□□□□ -1.1
EFCAB11-213ENST00000557685 ACIN1Q9UKV3 1341 aaKnown RBP8.16□□□□□ -1.1
EFCAB11-213ENST00000557685 TFIP11Q9UBB9 837 aaKnown RBP8.15□□□□□ -1.1
EFCAB11-213ENST00000557685 PALM3A6NDB9 673 aaPredicted RBP8.14□□□□□ -1.11
EFCAB11-213ENST00000557685 CFAP70Q5T0N1 1121 aa8.14□□□□□ -1.11
EFCAB11-213ENST00000557685 OCSTAMPQ9BR26 566 aa8.14□□□□□ -1.11
EFCAB11-213ENST00000557685 ARHGAP9Q9BRR9 750 aa8.14□□□□□ -1.11
EFCAB11-213ENST00000557685 FCF1Q9Y324 198 aaKnown RBP8.14□□□□□ -1.11
EFCAB11-213ENST00000557685 ST8SIA5O15466 376 aa8.13□□□□□ -1.11
EFCAB11-213ENST00000557685 SH3BP5LQ7L8J4 393 aa8.13□□□□□ -1.11
EFCAB11-213ENST00000557685 UCN2Q96RP3 112 aa8.13□□□□□ -1.11
EFCAB11-213ENST00000557685 ZBTB33Q86T24 672 aa8.12□□□□□ -1.11
EFCAB11-213ENST00000557685 NFATC2IPQ8NCF5 419 aa8.12□□□□□ -1.11
EFCAB11-213ENST00000557685 BAP1Q92560 729 aa8.12□□□□□ -1.11
EFCAB11-213ENST00000557685 PBXIP1Q96AQ6 731 aa8.12□□□□□ -1.11
EFCAB11-213ENST00000557685 AAASQ9NRG9 546 aa8.12□□□□□ -1.11
EFCAB11-213ENST00000557685 ATP9BO43861 1147 aa8.11□□□□□ -1.11
EFCAB11-213ENST00000557685 PDIA4P13667 645 aaKnown RBP8.11□□□□□ -1.11
EFCAB11-213ENST00000557685 RFX1P22670 979 aa8.11□□□□□ -1.11
EFCAB11-213ENST00000557685 LMOD1P29536 600 aaPredicted RBP8.11□□□□□ -1.11
EFCAB11-213ENST00000557685 SRPK2P78362 688 aaKnown RBP8.11□□□□□ -1.11
EFCAB11-213ENST00000557685 SH3RF1Q7Z6J0 888 aa8.11□□□□□ -1.11
EFCAB11-213ENST00000557685 BPHLQ86WA6 291 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms