RNA–Protein interactions for RNA: ENST00000557662.1

RIPK3-207, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-207ENST00000557662 QRICH2Q9H0J4 1663 aa33.4■■■□□ 2.94
RIPK3-207ENST00000557662 CCDC125Q86Z20 511 aa33.38■■■□□ 2.93
RIPK3-207ENST00000557662 NGDNQ8NEJ9 315 aaKnown RBP33.38■■■□□ 2.93
RIPK3-207ENST00000557662 CDK19Q9BWU1 502 aa33.38■■■□□ 2.93
RIPK3-207ENST00000557662 TRPM1Q7Z4N2 1603 aa33.38■■■□□ 2.93
RIPK3-207ENST00000557662 PLEKHG5O94827 1062 aa33.36■■■□□ 2.93
RIPK3-207ENST00000557662 SEPT12Q8IYM1 358 aa33.34■■■□□ 2.93
RIPK3-207ENST00000557662 THSD7AQ9UPZ6 1657 aa33.33■■■□□ 2.93
RIPK3-207ENST00000557662 BLMP54132 1417 aaPredicted RBP33.33■■■□□ 2.93
RIPK3-207ENST00000557662 PLEKHG3A1L390 1219 aa33.32■■■□□ 2.92
RIPK3-207ENST00000557662 CCDC61Q9Y6R9 512 aa33.31■■■□□ 2.92
RIPK3-207ENST00000557662 SRCAPQ6ZRS2 3230 aa33.3■■■□□ 2.92
RIPK3-207ENST00000557662 NRKQ7Z2Y5 1582 aa33.3■■■□□ 2.92
RIPK3-207ENST00000557662 BTG4Q9NY30 223 aa33.3■■■□□ 2.92
RIPK3-207ENST00000557662 ACEP12821 1306 aa33.28■■■□□ 2.92
RIPK3-207ENST00000557662 PAK3O75914 559 aaPredicted RBP33.26■■■□□ 2.91
RIPK3-207ENST00000557662 NBPF8Q3BBV2 869 aa33.26■■■□□ 2.91
RIPK3-207ENST00000557662 L3MBTL2Q969R5 705 aa33.26■■■□□ 2.91
RIPK3-207ENST00000557662 CENPJQ9HC77 1338 aaPredicted RBP33.26■■■□□ 2.91
RIPK3-207ENST00000557662 LMO7Q8WWI1 1683 aa33.25■■■□□ 2.91
RIPK3-207ENST00000557662 SPATA31A5Q5VU36 1347 aa33.24■■■□□ 2.91
RIPK3-207ENST00000557662 SPATA31A7Q8IWB4 1347 aa33.24■■■□□ 2.91
RIPK3-207ENST00000557662 KIAA0232Q92628 1395 aa33.23■■■□□ 2.91
RIPK3-207ENST00000557662 CCDC9Q9Y3X0 531 aaKnown RBP33.23■■■□□ 2.91
RIPK3-207ENST00000557662 PPIP5K1Q6PFW1 1433 aa33.21■■■□□ 2.91
RIPK3-207ENST00000557662 KRT27Q7Z3Y8 459 aa33.21■■■□□ 2.91
RIPK3-207ENST00000557662 PRDM11Q9NQV5 511 aa33.2■■■□□ 2.91
RIPK3-207ENST00000557662 USP19O94966 1318 aa33.2■■■□□ 2.91
RIPK3-207ENST00000557662 FAM98CQ17RN3 349 aaKnown RBP33.18■■■□□ 2.9
RIPK3-207ENST00000557662 SIN3AQ96ST3 1273 aa33.18■■■□□ 2.9
RIPK3-207ENST00000557662 RGPD1P0DJD0 1748 aa33.18■■■□□ 2.9
RIPK3-207ENST00000557662 BRD4O60885 1362 aaPredicted RBP33.16■■■□□ 2.9
RIPK3-207ENST00000557662 TNS1Q9HBL0 1735 aaKnown RBP33.16■■■□□ 2.9
RIPK3-207ENST00000557662 CPDO75976 1380 aa33.15■■■□□ 2.9
RIPK3-207ENST00000557662 AKAP12Q02952 1782 aa33.15■■■□□ 2.9
RIPK3-207ENST00000557662 CAMTA1Q9Y6Y1 1673 aa33.15■■■□□ 2.9
RIPK3-207ENST00000557662 CABP2Q9NPB3 220 aa33.13■■■□□ 2.89
RIPK3-207ENST00000557662 ZRANB1Q9UGI0 708 aa33.13■■■□□ 2.89
RIPK3-207ENST00000557662 SSH2Q76I76 1423 aa33.12■■■□□ 2.89
RIPK3-207ENST00000557662 SPATA31A1Q5TZJ5 1347 aa33.12■■■□□ 2.89
RIPK3-207ENST00000557662 SRPK2P78362 688 aaKnown RBP33.12■■■□□ 2.89
RIPK3-207ENST00000557662 NUTM2GQ5VZR2 741 aa33.12■■■□□ 2.89
RIPK3-207ENST00000557662 DEFB132Q7Z7B7 95 aa33.12■■■□□ 2.89
RIPK3-207ENST00000557662 PIK3C2AO00443 1686 aa33.12■■■□□ 2.89
RIPK3-207ENST00000557662 USP6P35125 1406 aa33.11■■■□□ 2.89
RIPK3-207ENST00000557662 CHRNA2Q15822 529 aa33.11■■■□□ 2.89
RIPK3-207ENST00000557662 SLIT3O75094 1523 aa33.1■■■□□ 2.89
RIPK3-207ENST00000557662 ZC3H6P61129 1189 aaKnown RBP33.08■■■□□ 2.89
RIPK3-207ENST00000557662 ABTB2Q8N961 1025 aa33.08■■■□□ 2.89
RIPK3-207ENST00000557662 COL18A1P39060 1754 aa33.06■■■□□ 2.88
RIPK3-207ENST00000557662 ROCK2O75116 1388 aaKnown RBP33.04■■■□□ 2.88
RIPK3-207ENST00000557662 DISP2A7MBM2 1401 aa33.03■■■□□ 2.88
RIPK3-207ENST00000557662 CABP1Q9NZU7 370 aa33.03■■■□□ 2.88
RIPK3-207ENST00000557662 PARP4Q9UKK3 1724 aaKnown RBP33.02■■■□□ 2.88
RIPK3-207ENST00000557662 A0A0G2JS52 829 aa33.02■■■□□ 2.88
RIPK3-207ENST00000557662 MYT1Q01538 1121 aa33.02■■■□□ 2.88
RIPK3-207ENST00000557662 GCP02774 474 aa33.01■■■□□ 2.87
RIPK3-207ENST00000557662 SF3B2Q13435 895 aaKnown RBP33.01■■■□□ 2.87
RIPK3-207ENST00000557662 NLRP13Q86W25 1043 aa33.01■■■□□ 2.87
RIPK3-207ENST00000557662 EVC2Q86UK5 1308 aa33.01■■■□□ 2.87
RIPK3-207ENST00000557662 COL5A2P05997 1499 aaPredicted RBP33■■■□□ 2.87
RIPK3-207ENST00000557662 MON2Q7Z3U7 1717 aa33■■■□□ 2.87
RIPK3-207ENST00000557662 NEUROD1Q13562 356 aa32.99■■■□□ 2.87
RIPK3-207ENST00000557662 STRN4Q9NRL3 753 aa32.99■■■□□ 2.87
RIPK3-207ENST00000557662 SBNO2Q9Y2G9 1366 aa32.98■■■□□ 2.87
RIPK3-207ENST00000557662 BARGINQ6ZT62 677 aa32.98■■■□□ 2.87
RIPK3-207ENST00000557662 FAM182BQ5T319 152 aa32.97■■■□□ 2.87
RIPK3-207ENST00000557662 LRP5O75197 1615 aa32.97■■■□□ 2.87
RIPK3-207ENST00000557662 WNK3Q9BYP7 1800 aa32.97■■■□□ 2.87
RIPK3-207ENST00000557662 CPSF1Q10570 1443 aaKnown RBP32.95■■■□□ 2.87
RIPK3-207ENST00000557662 USP54Q70EL1 1684 aa32.95■■■□□ 2.87
RIPK3-207ENST00000557662 RGPD5Q99666 1765 aa32.94■■■□□ 2.86
RIPK3-207ENST00000557662 LARP1Q6PKG0 1096 aaKnown RBP32.94■■■□□ 2.86
RIPK3-207ENST00000557662 BAG6P46379 1132 aa32.93■■■□□ 2.86
RIPK3-207ENST00000557662 AATKQ6ZMQ8 1374 aa32.92■■■□□ 2.86
RIPK3-207ENST00000557662 RREB1Q92766 1687 aa32.91■■■□□ 2.86
RIPK3-207ENST00000557662 PEAK1Q9H792 1746 aa32.91■■■□□ 2.86
RIPK3-207ENST00000557662 EVA1CP58658 441 aa32.88■■■□□ 2.85
RIPK3-207ENST00000557662 NLRP6P59044 892 aa32.88■■■□□ 2.85
RIPK3-207ENST00000557662 LRRC37A3O60309 1634 aa32.88■■■□□ 2.85
RIPK3-207ENST00000557662 NFAT5O94916 1531 aa32.87■■■□□ 2.85
RIPK3-207ENST00000557662 CRB1P82279 1406 aa32.87■■■□□ 2.85
RIPK3-207ENST00000557662 SBF2Q86WG5 1849 aa32.87■■■□□ 2.85
RIPK3-207ENST00000557662 TCP11L2Q8N4U5 519 aa32.87■■■□□ 2.85
RIPK3-207ENST00000557662 THRAP3Q9Y2W1 955 aaKnown RBP32.87■■■□□ 2.85
RIPK3-207ENST00000557662 TTC21BQ7Z4L5 1316 aa32.86■■■□□ 2.85
RIPK3-207ENST00000557662 FAM196AQ6ZSG2 479 aa32.86■■■□□ 2.85
RIPK3-207ENST00000557662 ZNF692Q9BU19 519 aaPredicted RBP32.86■■■□□ 2.85
RIPK3-207ENST00000557662 USP35Q9P2H5 1018 aa32.86■■■□□ 2.85
RIPK3-207ENST00000557662 EN1Q05925 392 aaPredicted RBP32.85■■■□□ 2.85
RIPK3-207ENST00000557662 CD163L1Q9NR16 1453 aa32.85■■■□□ 2.85
RIPK3-207ENST00000557662 TTC21AQ8NDW8 1320 aa32.83■■■□□ 2.85
RIPK3-207ENST00000557662 NUP188Q5SRE5 1749 aa32.82■■■□□ 2.85
RIPK3-207ENST00000557662 ABCC6O95255 1503 aa32.82■■■□□ 2.85
RIPK3-207ENST00000557662 CAMKK2Q96RR4 588 aa32.79■■■□□ 2.84
RIPK3-207ENST00000557662 ARHGEF25Q86VW2 580 aa32.78■■■□□ 2.84
RIPK3-207ENST00000557662 RGPD3A6NKT7 1758 aaPredicted RBP32.78■■■□□ 2.84
RIPK3-207ENST00000557662 RGPD4Q7Z3J3 1758 aa32.78■■■□□ 2.84
RIPK3-207ENST00000557662 TRIM37O94972 964 aa32.77■■■□□ 2.84
RIPK3-207ENST00000557662 AXIN2Q9Y2T1 843 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms