RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 GGCXP38435 758 aa8.25□□□□□ -1.09
MTHFD1-216ENST00000557539 DDX11L8A8MPP1 907 aa8.24□□□□□ -1.09
MTHFD1-216ENST00000557539 PPEF1O14829 653 aaPredicted RBP8.24□□□□□ -1.09
MTHFD1-216ENST00000557539 GFRA3O60609 400 aa8.24□□□□□ -1.09
MTHFD1-216ENST00000557539 S1PR4O95977 384 aa8.24□□□□□ -1.09
MTHFD1-216ENST00000557539 IRF5Q13568 498 aa8.24□□□□□ -1.09
MTHFD1-216ENST00000557539 Q6ZNB5 142 aa8.24□□□□□ -1.09
MTHFD1-216ENST00000557539 SCUBE3Q8IX30 993 aa8.24□□□□□ -1.09
MTHFD1-216ENST00000557539 PRM3Q9NNZ6 103 aa8.24□□□□□ -1.09
MTHFD1-216ENST00000557539 ACIN1Q9UKV3 1341 aaKnown RBP8.24□□□□□ -1.09
MTHFD1-216ENST00000557539 TSPOAP1O95153 1857 aa8.23□□□□□ -1.09
MTHFD1-216ENST00000557539 POM121CA8CG34 1229 aa8.23□□□□□ -1.09
MTHFD1-216ENST00000557539 SPTLC1O15269 473 aa8.23□□□□□ -1.09
MTHFD1-216ENST00000557539 NR1I2O75469 434 aa8.23□□□□□ -1.09
MTHFD1-216ENST00000557539 PPP1R15AO75807 674 aaPredicted RBP8.23□□□□□ -1.09
MTHFD1-216ENST00000557539 NUTM1Q86Y26 1132 aa8.23□□□□□ -1.09
MTHFD1-216ENST00000557539 RDH13Q8NBN7 331 aa8.23□□□□□ -1.09
MTHFD1-216ENST00000557539 GZF1Q9H116 711 aaPredicted RBP8.23□□□□□ -1.09
MTHFD1-216ENST00000557539 TBC1D2BQ9UPU7 963 aa8.23□□□□□ -1.09
MTHFD1-216ENST00000557539 BAZ1BQ9UIG0 1483 aaKnown RBP8.23□□□□□ -1.09
MTHFD1-216ENST00000557539 SNAPC4Q5SXM2 1469 aa8.22□□□□□ -1.09
MTHFD1-216ENST00000557539 IFT140Q96RY7 1462 aa8.22□□□□□ -1.09
MTHFD1-216ENST00000557539 AP1G2O75843 785 aa8.22□□□□□ -1.09
MTHFD1-216ENST00000557539 ADH1BP00325 375 aa8.22□□□□□ -1.09
MTHFD1-216ENST00000557539 FUT2Q10981 343 aa8.22□□□□□ -1.09
MTHFD1-216ENST00000557539 TMCO4Q5TGY1 634 aa8.22□□□□□ -1.09
MTHFD1-216ENST00000557539 RSBN1LQ6PCB5 846 aaPredicted RBP8.22□□□□□ -1.09
MTHFD1-216ENST00000557539 GLMNQ92990 594 aa8.22□□□□□ -1.09
MTHFD1-216ENST00000557539 URB2Q14146 1524 aaKnown RBP8.22□□□□□ -1.09
MTHFD1-216ENST00000557539 FANCD2Q9BXW9 1451 aa8.21□□□□□ -1.09
MTHFD1-216ENST00000557539 CD46P15529 392 aa8.21□□□□□ -1.1
MTHFD1-216ENST00000557539 GCGRP47871 477 aa8.21□□□□□ -1.1
MTHFD1-216ENST00000557539 LAPTM4AQ15012 233 aa8.21□□□□□ -1.1
MTHFD1-216ENST00000557539 QPCTQ16769 361 aa8.21□□□□□ -1.1
MTHFD1-216ENST00000557539 TUSC1Q2TAM9 212 aa8.21□□□□□ -1.1
MTHFD1-216ENST00000557539 MORN1Q5T089 497 aa8.21□□□□□ -1.1
MTHFD1-216ENST00000557539 RSPH4AQ5TD94 716 aa8.21□□□□□ -1.1
MTHFD1-216ENST00000557539 EIF4G3O43432 1585 aaKnown RBP8.21□□□□□ -1.1
MTHFD1-216ENST00000557539 MOXD2PA6NHM9 499 aa8.2□□□□□ -1.1
MTHFD1-216ENST00000557539 PLA2G2CQ5R387 149 aa8.2□□□□□ -1.1
MTHFD1-216ENST00000557539 ANKLE1Q8NAG6 615 aa8.2□□□□□ -1.1
MTHFD1-216ENST00000557539 DIP2BQ9P265 1576 aa8.19□□□□□ -1.1
MTHFD1-216ENST00000557539 NDUFV2P19404 249 aa8.19□□□□□ -1.1
MTHFD1-216ENST00000557539 SLC19A1P41440 591 aa8.19□□□□□ -1.1
MTHFD1-216ENST00000557539 LIAT1Q6ZQX7 453 aa8.19□□□□□ -1.1
MTHFD1-216ENST00000557539 TRIM67Q6ZTA4 783 aa8.19□□□□□ -1.1
MTHFD1-216ENST00000557539 SULF1Q8IWU6 871 aa8.19□□□□□ -1.1
MTHFD1-216ENST00000557539 THAP11Q96EK4 314 aa8.19□□□□□ -1.1
MTHFD1-216ENST00000557539 NUTM2BA6NNL0 878 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-216ENST00000557539 NUTM2EB1AL46 878 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-216ENST00000557539 NRG2O14511 850 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-216ENST00000557539 LILRB3O75022 631 aa8.18□□□□□ -1.1
MTHFD1-216ENST00000557539 PDE4CQ08493 712 aa8.18□□□□□ -1.1
MTHFD1-216ENST00000557539 RTL5Q5HYW3 569 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-216ENST00000557539 NUTM2DQ5VT03 806 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-216ENST00000557539 NUTM2AQ8IVF1 878 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-216ENST00000557539 SPSB2Q99619 263 aa8.18□□□□□ -1.1
MTHFD1-216ENST00000557539 SLC6A16Q9GZN6 736 aa8.18□□□□□ -1.1
MTHFD1-216ENST00000557539 SLC27A5Q9Y2P5 690 aa8.18□□□□□ -1.1
MTHFD1-216ENST00000557539 PCDHB15Q9Y5E8 787 aa8.18□□□□□ -1.1
MTHFD1-216ENST00000557539 USP17L8P0C7I0 530 aa8.17□□□□□ -1.1
MTHFD1-216ENST00000557539 ATP6V1AP38606 617 aa8.17□□□□□ -1.1
MTHFD1-216ENST00000557539 MFAP1P55081 439 aaKnown RBP8.17□□□□□ -1.1
MTHFD1-216ENST00000557539 RGS22Q8NE09 1264 aa8.17□□□□□ -1.1
MTHFD1-216ENST00000557539 PDZRN3Q9UPQ7 1066 aa8.17□□□□□ -1.1
MTHFD1-216ENST00000557539 MTMR7Q9Y216 660 aa8.17□□□□□ -1.1
MTHFD1-216ENST00000557539 SYNJ1O43426 1573 aa8.17□□□□□ -1.1
MTHFD1-216ENST00000557539 SPRYD7Q5W111 196 aa8.16□□□□□ -1.1
MTHFD1-216ENST00000557539 FAM160A2Q8N612 972 aaPredicted RBP8.16□□□□□ -1.1
MTHFD1-216ENST00000557539 CABLES1Q8TDN4 633 aa8.16□□□□□ -1.1
MTHFD1-216ENST00000557539 AQRO60306 1485 aaKnown RBP eCLIP8.15□□□□□ -1.1
MTHFD1-216ENST00000557539 PTPRMP28827 1452 aa8.15□□□□□ -1.1
MTHFD1-216ENST00000557539 RFX1P22670 979 aa8.15□□□□□ -1.1
MTHFD1-216ENST00000557539 HDGFL1Q5TGJ6 251 aa8.15□□□□□ -1.1
MTHFD1-216ENST00000557539 TRAF7Q6Q0C0 670 aa8.15□□□□□ -1.1
MTHFD1-216ENST00000557539 GJA5P36382 358 aa8.14□□□□□ -1.11
MTHFD1-216ENST00000557539 CHMP7Q8WUX9 453 aaPredicted RBP8.14□□□□□ -1.11
MTHFD1-216ENST00000557539 PBXIP1Q96AQ6 731 aa8.14□□□□□ -1.11
MTHFD1-216ENST00000557539 NDUFB9Q9Y6M9 179 aa8.14□□□□□ -1.11
MTHFD1-216ENST00000557539 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.13□□□□□ -1.11
MTHFD1-216ENST00000557539 BRICD5Q6PL45 260 aa8.13□□□□□ -1.11
MTHFD1-216ENST00000557539 ZNF598Q86UK7 904 aaKnown RBP8.13□□□□□ -1.11
MTHFD1-216ENST00000557539 FOXD4L5Q5VV16 416 aaPredicted RBP8.12□□□□□ -1.11
MTHFD1-216ENST00000557539 RNF19BQ6ZMZ0 732 aa8.12□□□□□ -1.11
MTHFD1-216ENST00000557539 FOXD4L4Q8WXT5 416 aaPredicted RBP8.12□□□□□ -1.11
MTHFD1-216ENST00000557539 PRDM9Q9NQV7 894 aa8.12□□□□□ -1.11
MTHFD1-216ENST00000557539 SALL2Q9Y467 1007 aaPredicted RBP8.12□□□□□ -1.11
MTHFD1-216ENST00000557539 PATL2C9JE40 543 aaKnown RBP8.11□□□□□ -1.11
MTHFD1-216ENST00000557539 UBAP1LF5GYI3 381 aa8.11□□□□□ -1.11
MTHFD1-216ENST00000557539 FMNL1O95466 1100 aaPredicted RBP8.11□□□□□ -1.11
MTHFD1-216ENST00000557539 CSB-PGBD3P0DP91 1061 aa8.11□□□□□ -1.11
MTHFD1-216ENST00000557539 PRPF38BQ5VTL8 546 aaKnown RBP8.11□□□□□ -1.11
MTHFD1-216ENST00000557539 ADAMTS19Q8TE59 1207 aa8.11□□□□□ -1.11
MTHFD1-216ENST00000557539 GJD4Q96KN9 370 aaPredicted RBP8.11□□□□□ -1.11
MTHFD1-216ENST00000557539 ZBTB3Q9H5J0 574 aa8.11□□□□□ -1.11
MTHFD1-216ENST00000557539 KDM4AO75164 1064 aa8.1□□□□□ -1.11
MTHFD1-216ENST00000557539 HSPA1LP34931 641 aa8.1□□□□□ -1.11
MTHFD1-216ENST00000557539 WASHC4Q2M389 1173 aa8.1□□□□□ -1.11
MTHFD1-216ENST00000557539 ZNF697Q5TEC3 545 aa8.1□□□□□ -1.11
MTHFD1-216ENST00000557539 HLA-CQ95604 372 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms