RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 HSPA2P54652 639 aa8.34□□□□□ -1.07
SCFD1-223ENST00000557076 GRIPAP1Q4V328 841 aa8.34□□□□□ -1.07
SCFD1-223ENST00000557076 NLRP7Q8WX94 980 aa8.34□□□□□ -1.07
SCFD1-223ENST00000557076 PHOX2BQ99453 314 aa8.34□□□□□ -1.07
SCFD1-223ENST00000557076 WDR7Q9Y4E6 1490 aa8.33□□□□□ -1.08
SCFD1-223ENST00000557076 FAM187AA6NFU0 413 aa8.33□□□□□ -1.08
SCFD1-223ENST00000557076 TNFRSF10AO00220 468 aa8.33□□□□□ -1.08
SCFD1-223ENST00000557076 SUPT5HO00267 1087 aaKnown RBP8.33□□□□□ -1.08
SCFD1-223ENST00000557076 MYT1Q01538 1121 aa8.33□□□□□ -1.08
SCFD1-223ENST00000557076 SLC27A5Q9Y2P5 690 aa8.33□□□□□ -1.08
SCFD1-223ENST00000557076 ARID4BQ4LE39 1312 aaPredicted RBP8.32□□□□□ -1.08
SCFD1-223ENST00000557076 FCF1Q9Y324 198 aaKnown RBP8.32□□□□□ -1.08
SCFD1-223ENST00000557076 ARAP3Q8WWN8 1544 aa8.32□□□□□ -1.08
SCFD1-223ENST00000557076 DISP1Q96F81 1524 aa8.31□□□□□ -1.08
SCFD1-223ENST00000557076 RAPGEF3O95398 923 aa8.31□□□□□ -1.08
SCFD1-223ENST00000557076 CD2BP2O95400 341 aaKnown RBP8.3□□□□□ -1.08
SCFD1-223ENST00000557076 MAP2K5Q13163 448 aa8.3□□□□□ -1.08
SCFD1-223ENST00000557076 MSS51Q4VC12 460 aa8.3□□□□□ -1.08
SCFD1-223ENST00000557076 FAM160A2Q8N612 972 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-223ENST00000557076 PCF11O94913 1555 aaKnown RBP8.3□□□□□ -1.08
SCFD1-223ENST00000557076 Q3C1V9 767 aa8.29□□□□□ -1.08
SCFD1-223ENST00000557076 BRICD5Q6PL45 260 aa8.29□□□□□ -1.08
SCFD1-223ENST00000557076 PKD2L1Q9P0L9 805 aa8.29□□□□□ -1.08
SCFD1-223ENST00000557076 KDM2AQ9Y2K7 1162 aa8.29□□□□□ -1.08
SCFD1-223ENST00000557076 FOXC1Q12948 553 aa8.28□□□□□ -1.08
SCFD1-223ENST00000557076 ADAMTSL3P82987 1691 aa8.27□□□□□ -1.08
SCFD1-223ENST00000557076 CUL7Q14999 1698 aa8.27□□□□□ -1.08
SCFD1-223ENST00000557076 ZBTB24O43167 697 aaPredicted RBP8.27□□□□□ -1.09
SCFD1-223ENST00000557076 CD46P15529 392 aa8.27□□□□□ -1.09
SCFD1-223ENST00000557076 FAM9AQ8IZU1 332 aaPredicted RBP8.27□□□□□ -1.09
SCFD1-223ENST00000557076 RNF19BQ6ZMZ0 732 aa8.26□□□□□ -1.09
SCFD1-223ENST00000557076 VSIG10Q8N0Z9 540 aa8.26□□□□□ -1.09
SCFD1-223ENST00000557076 ZNF775Q96BV0 537 aaPredicted RBP8.26□□□□□ -1.09
SCFD1-223ENST00000557076 PRDM9Q9NQV7 894 aa8.26□□□□□ -1.09
SCFD1-223ENST00000557076 IQGAP2Q13576 1575 aa8.26□□□□□ -1.09
SCFD1-223ENST00000557076 UGGT2Q9NYU1 1516 aa8.25□□□□□ -1.09
SCFD1-223ENST00000557076 IRF6O14896 467 aa8.25□□□□□ -1.09
SCFD1-223ENST00000557076 MINK1Q8N4C8 1332 aaPredicted RBP8.25□□□□□ -1.09
SCFD1-223ENST00000557076 ZCCHC11Q5TAX3 1644 aaKnown RBP8.25□□□□□ -1.09
SCFD1-223ENST00000557076 KDM4AO75164 1064 aa8.24□□□□□ -1.09
SCFD1-223ENST00000557076 USP46P62068 366 aa8.24□□□□□ -1.09
SCFD1-223ENST00000557076 CYP4X1Q8N118 509 aa8.24□□□□□ -1.09
SCFD1-223ENST00000557076 CRIPAKQ8N1N5 446 aa8.24□□□□□ -1.09
SCFD1-223ENST00000557076 YEATS2Q9ULM3 1422 aa8.23□□□□□ -1.09
SCFD1-223ENST00000557076 KIF21BO75037 1637 aa8.23□□□□□ -1.09
SCFD1-223ENST00000557076 MMP16P51512 607 aa8.23□□□□□ -1.09
SCFD1-223ENST00000557076 AAASQ9NRG9 546 aa8.23□□□□□ -1.09
SCFD1-223ENST00000557076 TOR4AQ9NXH8 423 aa8.23□□□□□ -1.09
SCFD1-223ENST00000557076 AVPP01185 164 aa8.22□□□□□ -1.09
SCFD1-223ENST00000557076 MDM2Q00987 491 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-223ENST00000557076 CFAP43Q8NDM7 1665 aa8.21□□□□□ -1.09
SCFD1-223ENST00000557076 ST8SIA5O15466 376 aa8.21□□□□□ -1.1
SCFD1-223ENST00000557076 USB1Q9BQ65 265 aaKnown RBP8.21□□□□□ -1.1
SCFD1-223ENST00000557076 POGZQ7Z3K3 1410 aa8.2□□□□□ -1.1
SCFD1-223ENST00000557076 NEO1Q92859 1461 aa8.2□□□□□ -1.1
SCFD1-223ENST00000557076 CTC1Q2NKJ3 1217 aa8.2□□□□□ -1.1
SCFD1-223ENST00000557076 CCDC102AQ96A19 550 aa8.2□□□□□ -1.1
SCFD1-223ENST00000557076 RAPGEF2Q9Y4G8 1499 aa8.19□□□□□ -1.1
SCFD1-223ENST00000557076 POTECB2RU33 542 aa8.19□□□□□ -1.1
SCFD1-223ENST00000557076 WNT7AO00755 349 aa8.19□□□□□ -1.1
SCFD1-223ENST00000557076 DXOO77932 396 aaKnown RBP8.19□□□□□ -1.1
SCFD1-223ENST00000557076 CLCN1P35523 988 aa8.19□□□□□ -1.1
SCFD1-223ENST00000557076 TRIM32Q13049 653 aa8.19□□□□□ -1.1
SCFD1-223ENST00000557076 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
SCFD1-223ENST00000557076 ATP10BO94823 1461 aa8.19□□□□□ -1.1
SCFD1-223ENST00000557076 BCORL1Q5H9F3 1711 aa8.18□□□□□ -1.1
SCFD1-223ENST00000557076 TTC24A2A3L6 582 aaPredicted RBP8.18□□□□□ -1.1
SCFD1-223ENST00000557076 HOXA2O43364 376 aa8.18□□□□□ -1.1
SCFD1-223ENST00000557076 GOLGA3Q08378 1498 aa8.18□□□□□ -1.1
SCFD1-223ENST00000557076 ARID3CA6NKF2 412 aa8.17□□□□□ -1.1
SCFD1-223ENST00000557076 AXIN1O15169 862 aa8.17□□□□□ -1.1
SCFD1-223ENST00000557076 SMCPP49901 116 aaPredicted RBP8.17□□□□□ -1.1
SCFD1-223ENST00000557076 MLECQ14165 292 aa8.17□□□□□ -1.1
SCFD1-223ENST00000557076 KIAA0556O60303 1618 aa8.17□□□□□ -1.1
SCFD1-223ENST00000557076 MADDQ8WXG6 1647 aa8.17□□□□□ -1.1
SCFD1-223ENST00000557076 ABCA8O94911 1581 aa8.16□□□□□ -1.1
SCFD1-223ENST00000557076 CEBPAP49715 358 aaPredicted RBP8.16□□□□□ -1.1
SCFD1-223ENST00000557076 FHOD3Q2V2M9 1422 aa8.16□□□□□ -1.1
SCFD1-223ENST00000557076 SNIP1Q8TAD8 396 aaKnown RBP8.16□□□□□ -1.1
SCFD1-223ENST00000557076 REPIN1Q9BWE0 567 aaKnown RBP8.16□□□□□ -1.1
SCFD1-223ENST00000557076 FAM217BQ9NTX9 383 aaPredicted RBP8.16□□□□□ -1.1
SCFD1-223ENST00000557076 DENND4BO75064 1496 aaPredicted RBP8.15□□□□□ -1.1
SCFD1-223ENST00000557076 PTPRTO14522 1441 aa8.15□□□□□ -1.1
SCFD1-223ENST00000557076 AKNAQ7Z591 1439 aa8.15□□□□□ -1.1
SCFD1-223ENST00000557076 KRI1Q8N9T8 703 aaKnown RBP8.15□□□□□ -1.1
SCFD1-223ENST00000557076 PLEKHD1A6NEE1 506 aa8.14□□□□□ -1.11
SCFD1-223ENST00000557076 SPATA31D1Q6ZQQ2 1576 aa8.14□□□□□ -1.11
SCFD1-223ENST00000557076 FANCAO15360 1455 aa8.13□□□□□ -1.11
SCFD1-223ENST00000557076 WNT7BP56706 349 aa8.13□□□□□ -1.11
SCFD1-223ENST00000557076 NUTM1Q86Y26 1132 aa8.13□□□□□ -1.11
SCFD1-223ENST00000557076 CCDC24Q8N4L8 307 aa8.13□□□□□ -1.11
SCFD1-223ENST00000557076 HLA-CQ95604 372 aa8.13□□□□□ -1.11
SCFD1-223ENST00000557076 SMPD1P17405 629 aa8.12□□□□□ -1.11
SCFD1-223ENST00000557076 JUNDP17535 347 aa8.12□□□□□ -1.11
SCFD1-223ENST00000557076 MRGPRX2Q96LB1 330 aa8.12□□□□□ -1.11
SCFD1-223ENST00000557076 DACH1Q9UI36 760 aa8.12□□□□□ -1.11
SCFD1-223ENST00000557076 IQSEC2Q5JU85 1478 aa8.12□□□□□ -1.11
SCFD1-223ENST00000557076 MAGI2Q86UL8 1455 aa8.12□□□□□ -1.11
SCFD1-223ENST00000557076 SETD1BQ9UPS6 1966 aaKnown RBP8.11□□□□□ -1.11
SCFD1-223ENST00000557076 ABCA9Q8IUA7 1624 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms