RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 SOCS7O14512 581 aa14.48□□□□□ -0.09
HNRNPC-228ENST00000557033 RSPH6AQ9H0K4 717 aa14.48□□□□□ -0.09
HNRNPC-228ENST00000557033 HRCP23327 699 aa14.47□□□□□ -0.09
HNRNPC-228ENST00000557033 DCCP43146 1447 aa14.47□□□□□ -0.09
HNRNPC-228ENST00000557033 PPLO60437 1756 aa14.47□□□□□ -0.09
HNRNPC-228ENST00000557033 RGL3Q3MIN7 710 aa14.46□□□□□ -0.09
HNRNPC-228ENST00000557033 CABP2Q9NPB3 220 aa14.46□□□□□ -0.09
HNRNPC-228ENST00000557033 SPATA31E1Q6ZUB1 1445 aa14.46□□□□□ -0.09
HNRNPC-228ENST00000557033 ANKRD30BQ9BXX2 1392 aa14.46□□□□□ -0.1
HNRNPC-228ENST00000557033 RAB3GAP2Q9H2M9 1393 aa14.46□□□□□ -0.1
HNRNPC-228ENST00000557033 KRI1Q8N9T8 703 aaKnown RBP14.45□□□□□ -0.1
HNRNPC-228ENST00000557033 CACNB1Q02641 598 aaPredicted RBP14.44□□□□□ -0.1
HNRNPC-228ENST00000557033 CAMK2BQ13554 666 aa14.43□□□□□ -0.1
HNRNPC-228ENST00000557033 CRISPLD2Q9H0B8 497 aa14.43□□□□□ -0.1
HNRNPC-228ENST00000557033 KDM4CQ9H3R0 1056 aa14.43□□□□□ -0.1
HNRNPC-228ENST00000557033 SETD1AO15047 1707 aaKnown RBP14.43□□□□□ -0.1
HNRNPC-228ENST00000557033 PHLPP1O60346 1717 aa14.43□□□□□ -0.1
HNRNPC-228ENST00000557033 ADGRF5Q8IZF2 1346 aa14.42□□□□□ -0.1
HNRNPC-228ENST00000557033 PRAG1Q86YV5 1406 aa14.42□□□□□ -0.1
HNRNPC-228ENST00000557033 RBM26Q5T8P6 1007 aaKnown RBP14.42□□□□□ -0.1
HNRNPC-228ENST00000557033 CHADLQ6NUI6 762 aa14.42□□□□□ -0.1
HNRNPC-228ENST00000557033 FARP1Q9Y4F1 1045 aaPredicted RBP14.42□□□□□ -0.1
HNRNPC-228ENST00000557033 JCADQ9P266 1359 aa14.42□□□□□ -0.1
HNRNPC-228ENST00000557033 PTCH1Q13635 1447 aa14.41□□□□□ -0.1
HNRNPC-228ENST00000557033 ADGRL3Q9HAR2 1447 aa14.41□□□□□ -0.1
HNRNPC-228ENST00000557033 BRINP3Q76B58 766 aa14.41□□□□□ -0.1
HNRNPC-228ENST00000557033 IFNL1Q8IU54 200 aa14.41□□□□□ -0.1
HNRNPC-228ENST00000557033 DDX27Q96GQ7 796 aaKnown RBP14.41□□□□□ -0.1
HNRNPC-228ENST00000557033 GPIHBP1Q8IV16 184 aa14.4□□□□□ -0.1
HNRNPC-228ENST00000557033 MST1RQ04912 1400 aa14.4□□□□□ -0.1
HNRNPC-228ENST00000557033 ROBO2Q9HCK4 1378 aa14.39□□□□□ -0.11
HNRNPC-228ENST00000557033 IFT172Q9UG01 1749 aa14.39□□□□□ -0.11
HNRNPC-228ENST00000557033 AHDC1Q5TGY3 1603 aaPredicted RBP14.39□□□□□ -0.11
HNRNPC-228ENST00000557033 COL16A1Q07092 1604 aaPredicted RBP14.38□□□□□ -0.11
HNRNPC-228ENST00000557033 TRIM66O15016 1216 aa14.38□□□□□ -0.11
HNRNPC-228ENST00000557033 SPATA31A6Q5VVP1 1343 aa14.38□□□□□ -0.11
HNRNPC-228ENST00000557033 MLLT3P42568 568 aaPredicted RBP14.37□□□□□ -0.11
HNRNPC-228ENST00000557033 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
HNRNPC-228ENST00000557033 RGS17Q9UGC6 210 aaPredicted RBP14.37□□□□□ -0.11
HNRNPC-228ENST00000557033 NALCNQ8IZF0 1738 aa14.36□□□□□ -0.11
HNRNPC-228ENST00000557033 PIK3C2GO75747 1445 aa14.36□□□□□ -0.11
HNRNPC-228ENST00000557033 PDE4DQ08499 809 aa14.36□□□□□ -0.11
HNRNPC-228ENST00000557033 SIRT1Q96EB6 747 aa14.36□□□□□ -0.11
HNRNPC-228ENST00000557033 C14orf93Q9H972 538 aaKnown RBP14.36□□□□□ -0.11
HNRNPC-228ENST00000557033 ASXL1Q8IXJ9 1541 aa14.36□□□□□ -0.11
HNRNPC-228ENST00000557033 LRPPRCP42704 1394 aaKnown RBP14.35□□□□□ -0.11
HNRNPC-228ENST00000557033 ABCC11Q96J66 1382 aa14.35□□□□□ -0.11
HNRNPC-228ENST00000557033 LRRC59Q96AG4 307 aaKnown RBP14.35□□□□□ -0.11
HNRNPC-228ENST00000557033 STAC3Q96MF2 364 aa14.35□□□□□ -0.11
HNRNPC-228ENST00000557033 TECPR2O15040 1411 aa14.34□□□□□ -0.11
HNRNPC-228ENST00000557033 TMEM132EQ6IEE7 984 aa14.34□□□□□ -0.11
HNRNPC-228ENST00000557033 MS4A4AQ96JQ5 239 aa14.34□□□□□ -0.11
HNRNPC-228ENST00000557033 STK26Q9P289 416 aa14.34□□□□□ -0.11
HNRNPC-228ENST00000557033 C1orf167Q5SNV9 1468 aa14.33□□□□□ -0.12
HNRNPC-228ENST00000557033 MYOM2P54296 1465 aa14.32□□□□□ -0.12
HNRNPC-228ENST00000557033 NRXN1Q9ULB1 1477 aa14.32□□□□□ -0.12
HNRNPC-228ENST00000557033 NHSL1Q5SYE7 1610 aa14.32□□□□□ -0.12
HNRNPC-228ENST00000557033 SHPRHQ149N8 1683 aa14.32□□□□□ -0.12
HNRNPC-228ENST00000557033 DHX57Q6P158 1386 aaKnown RBP14.32□□□□□ -0.12
HNRNPC-228ENST00000557033 CFAP70Q5T0N1 1121 aa14.31□□□□□ -0.12
HNRNPC-228ENST00000557033 WAPLQ7Z5K2 1190 aa14.31□□□□□ -0.12
HNRNPC-228ENST00000557033 YTHDC2Q9H6S0 1430 aaKnown RBP14.31□□□□□ -0.12
HNRNPC-228ENST00000557033 MAP3K13O43283 966 aa14.3□□□□□ -0.12
HNRNPC-228ENST00000557033 ORAI2Q96SN7 254 aa14.3□□□□□ -0.12
HNRNPC-228ENST00000557033 KNDC1Q76NI1 1749 aa14.29□□□□□ -0.12
HNRNPC-228ENST00000557033 MEX3CQ5U5Q3 659 aaKnown RBP14.29□□□□□ -0.12
HNRNPC-228ENST00000557033 POTEAQ6S8J7 498 aa14.29□□□□□ -0.12
HNRNPC-228ENST00000557033 LAMC1P11047 1609 aa14.29□□□□□ -0.12
HNRNPC-228ENST00000557033 SOS2Q07890 1332 aaPredicted RBP14.28□□□□□ -0.12
HNRNPC-228ENST00000557033 CDC42BPGQ6DT37 1551 aa14.28□□□□□ -0.12
HNRNPC-228ENST00000557033 DCAF11Q8TEB1 546 aa14.28□□□□□ -0.12
HNRNPC-228ENST00000557033 DDX17Q92841 729 aaKnown RBP14.28□□□□□ -0.12
HNRNPC-228ENST00000557033 MKRN3Q13064 507 aaKnown RBP14.27□□□□□ -0.13
HNRNPC-228ENST00000557033 ESCO1Q5FWF5 840 aa14.27□□□□□ -0.13
HNRNPC-228ENST00000557033 ZNF772Q68DY9 489 aaPredicted RBP14.27□□□□□ -0.13
HNRNPC-228ENST00000557033 KIF12Q96FN5 646 aa14.27□□□□□ -0.13
HNRNPC-228ENST00000557033 LRP6O75581 1613 aa14.26□□□□□ -0.13
HNRNPC-228ENST00000557033 C1orf115Q9H7X2 142 aa14.26□□□□□ -0.13
HNRNPC-228ENST00000557033 PLEKHH1Q9ULM0 1364 aa14.25□□□□□ -0.13
HNRNPC-228ENST00000557033 NUTM2BA6NNL0 878 aaPredicted RBP14.25□□□□□ -0.13
HNRNPC-228ENST00000557033 NUTM2EB1AL46 878 aaPredicted RBP14.25□□□□□ -0.13
HNRNPC-228ENST00000557033 NUTM2AQ8IVF1 878 aaPredicted RBP14.25□□□□□ -0.13
HNRNPC-228ENST00000557033 PNPLA6Q8IY17 1366 aa14.24□□□□□ -0.13
HNRNPC-228ENST00000557033 NPHP3Q7Z494 1330 aa14.24□□□□□ -0.13
HNRNPC-228ENST00000557033 PRAM1Q96QH2 718 aa14.23□□□□□ -0.13
HNRNPC-228ENST00000557033 ARID3AQ99856 593 aa14.23□□□□□ -0.13
HNRNPC-228ENST00000557033 FAM117AQ9C073 453 aa14.23□□□□□ -0.13
HNRNPC-228ENST00000557033 POGKQ9P215 609 aa14.23□□□□□ -0.13
HNRNPC-228ENST00000557033 DLC1Q96QB1 1528 aa14.22□□□□□ -0.13
HNRNPC-228ENST00000557033 FOXO3O43524 673 aa14.22□□□□□ -0.13
HNRNPC-228ENST00000557033 NUTM2FA1L443 756 aa14.21□□□□□ -0.13
HNRNPC-228ENST00000557033 ADGRB1O14514 1584 aa14.21□□□□□ -0.14
HNRNPC-228ENST00000557033 ZNF316A6NFI3 1004 aaPredicted RBP14.2□□□□□ -0.14
HNRNPC-228ENST00000557033 TRAK1Q9UPV9 953 aa14.2□□□□□ -0.14
HNRNPC-228ENST00000557033 FMN2Q9NZ56 1722 aa14.2□□□□□ -0.14
HNRNPC-228ENST00000557033 PAK3O75914 559 aaPredicted RBP14.18□□□□□ -0.14
HNRNPC-228ENST00000557033 RXRBP28702 533 aa14.18□□□□□ -0.14
HNRNPC-228ENST00000557033 SAFB2Q14151 953 aaKnown RBP eCLIP14.18□□□□□ -0.14
HNRNPC-228ENST00000557033 C8orf37Q96NL8 207 aa14.18□□□□□ -0.14
HNRNPC-228ENST00000557033 PXDNQ92626 1479 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms