RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 MARF1Q9Y4F3 1742 aaKnown RBP25.5■■□□□ 1.67
XRCC3-217ENST00000556980 CDK12Q9NYV4 1490 aaPredicted RBP25.49■■□□□ 1.67
XRCC3-217ENST00000556980 BCL9LQ86UU0 1499 aa25.47■■□□□ 1.67
XRCC3-217ENST00000556980 SBNO2Q9Y2G9 1366 aa25.47■■□□□ 1.67
XRCC3-217ENST00000556980 ABCA3Q99758 1704 aa25.47■■□□□ 1.67
XRCC3-217ENST00000556980 CABP1Q9NZU7 370 aa25.47■■□□□ 1.67
XRCC3-217ENST00000556980 ATRNO75882 1429 aa25.46■■□□□ 1.67
XRCC3-217ENST00000556980 SLIT2O94813 1529 aa25.44■■□□□ 1.66
XRCC3-217ENST00000556980 UNC5CLQ8IV45 518 aa25.43■■□□□ 1.66
XRCC3-217ENST00000556980 RGS12O14924 1447 aa25.43■■□□□ 1.66
XRCC3-217ENST00000556980 ATAD2Q6PL18 1390 aa25.43■■□□□ 1.66
XRCC3-217ENST00000556980 TIMELESSQ9UNS1 1208 aa25.42■■□□□ 1.66
XRCC3-217ENST00000556980 NUTM2GQ5VZR2 741 aa25.41■■□□□ 1.66
XRCC3-217ENST00000556980 CCER1Q8TC90 406 aaPredicted RBP25.41■■□□□ 1.66
XRCC3-217ENST00000556980 ABTB2Q8N961 1025 aa25.4■■□□□ 1.66
XRCC3-217ENST00000556980 BRD4O60885 1362 aaPredicted RBP25.4■■□□□ 1.66
XRCC3-217ENST00000556980 USP6P35125 1406 aa25.39■■□□□ 1.66
XRCC3-217ENST00000556980 FAM83GA6ND36 823 aa25.39■■□□□ 1.66
XRCC3-217ENST00000556980 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.37■■□□□ 1.65
XRCC3-217ENST00000556980 GJD4Q96KN9 370 aaPredicted RBP25.37■■□□□ 1.65
XRCC3-217ENST00000556980 PLCH1Q4KWH8 1693 aa25.36■■□□□ 1.65
XRCC3-217ENST00000556980 PRDM11Q9NQV5 511 aa25.36■■□□□ 1.65
XRCC3-217ENST00000556980 CRYBG1Q9Y4K1 1723 aa25.36■■□□□ 1.65
XRCC3-217ENST00000556980 ST20-MTHFSA0A0A6YYL1 179 aa25.34■■□□□ 1.65
XRCC3-217ENST00000556980 NLRP13Q86W25 1043 aa25.34■■□□□ 1.65
XRCC3-217ENST00000556980 ZNF692Q9BU19 519 aaPredicted RBP25.33■■□□□ 1.65
XRCC3-217ENST00000556980 BTG4Q9NY30 223 aa25.33■■□□□ 1.65
XRCC3-217ENST00000556980 NWD2Q9ULI1 1742 aa25.33■■□□□ 1.65
XRCC3-217ENST00000556980 CCDC9Q9Y3X0 531 aaKnown RBP25.33■■□□□ 1.65
XRCC3-217ENST00000556980 KIAA0232Q92628 1395 aa25.32■■□□□ 1.64
XRCC3-217ENST00000556980 COL14A1Q05707 1796 aaKnown RBP25.32■■□□□ 1.64
XRCC3-217ENST00000556980 VPS72Q15906 364 aa25.32■■□□□ 1.64
XRCC3-217ENST00000556980 PHRF1Q9P1Y6 1649 aaKnown RBP25.32■■□□□ 1.64
XRCC3-217ENST00000556980 USP19O94966 1318 aa25.32■■□□□ 1.64
XRCC3-217ENST00000556980 USP47Q96K76 1375 aa25.31■■□□□ 1.64
XRCC3-217ENST00000556980 TESK2Q96S53 571 aa25.31■■□□□ 1.64
XRCC3-217ENST00000556980 SLC24A1O60721 1099 aa25.3■■□□□ 1.64
XRCC3-217ENST00000556980 ZC3H6P61129 1189 aaKnown RBP25.3■■□□□ 1.64
XRCC3-217ENST00000556980 TMC1Q8TDI8 760 aa25.3■■□□□ 1.64
XRCC3-217ENST00000556980 SSH2Q76I76 1423 aa25.29■■□□□ 1.64
XRCC3-217ENST00000556980 KTN1Q86UP2 1357 aaKnown RBP25.29■■□□□ 1.64
XRCC3-217ENST00000556980 CPSF1Q10570 1443 aaKnown RBP25.29■■□□□ 1.64
XRCC3-217ENST00000556980 GLI3P10071 1580 aa25.28■■□□□ 1.64
XRCC3-217ENST00000556980 NRKQ7Z2Y5 1582 aa25.28■■□□□ 1.64
XRCC3-217ENST00000556980 NLRP6P59044 892 aa25.28■■□□□ 1.64
XRCC3-217ENST00000556980 CHRNA2Q15822 529 aa25.28■■□□□ 1.64
XRCC3-217ENST00000556980 PUS7Q96PZ0 661 aaKnown RBP25.27■■□□□ 1.64
XRCC3-217ENST00000556980 TTC21BQ7Z4L5 1316 aa25.27■■□□□ 1.64
XRCC3-217ENST00000556980 GCP02774 474 aa25.25■■□□□ 1.63
XRCC3-217ENST00000556980 UPF1Q92900 1129 aaKnown RBP eCLIP25.25■■□□□ 1.63
XRCC3-217ENST00000556980 TTC21AQ8NDW8 1320 aa25.25■■□□□ 1.63
XRCC3-217ENST00000556980 NRAPQ86VF7 1730 aa25.25■■□□□ 1.63
XRCC3-217ENST00000556980 AKAP12Q02952 1782 aa25.24■■□□□ 1.63
XRCC3-217ENST00000556980 CPDO75976 1380 aa25.24■■□□□ 1.63
XRCC3-217ENST00000556980 HDGFL2Q7Z4V5 671 aaPredicted RBP25.24■■□□□ 1.63
XRCC3-217ENST00000556980 SLC12A5Q9H2X9 1139 aa25.23■■□□□ 1.63
XRCC3-217ENST00000556980 PIK3C2AO00443 1686 aa25.23■■□□□ 1.63
XRCC3-217ENST00000556980 TERF2IPQ9NYB0 399 aa25.22■■□□□ 1.63
XRCC3-217ENST00000556980 CD163L1Q9NR16 1453 aa25.21■■□□□ 1.63
XRCC3-217ENST00000556980 TMF1P82094 1093 aa25.21■■□□□ 1.63
XRCC3-217ENST00000556980 NINLQ9Y2I6 1382 aa25.2■■□□□ 1.63
XRCC3-217ENST00000556980 STRN4Q9NRL3 753 aa25.2■■□□□ 1.62
XRCC3-217ENST00000556980 SLIT3O75094 1523 aa25.2■■□□□ 1.62
XRCC3-217ENST00000556980 A0A0G2JS52 829 aa25.19■■□□□ 1.62
XRCC3-217ENST00000556980 ZBTB7CA1YPR0 619 aa25.19■■□□□ 1.62
XRCC3-217ENST00000556980 MYT1Q01538 1121 aa25.19■■□□□ 1.62
XRCC3-217ENST00000556980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.19■■□□□ 1.62
XRCC3-217ENST00000556980 SEPT12Q8IYM1 358 aa25.19■■□□□ 1.62
XRCC3-217ENST00000556980 SPATA31A5Q5VU36 1347 aa25.18■■□□□ 1.62
XRCC3-217ENST00000556980 SPATA31A7Q8IWB4 1347 aa25.18■■□□□ 1.62
XRCC3-217ENST00000556980 MON2Q7Z3U7 1717 aa25.18■■□□□ 1.62
XRCC3-217ENST00000556980 A0A1W2PP64 1363 aa25.18■■□□□ 1.62
XRCC3-217ENST00000556980 ONECUT3O60422 494 aaPredicted RBP25.17■■□□□ 1.62
XRCC3-217ENST00000556980 EVA1CP58658 441 aa25.17■■□□□ 1.62
XRCC3-217ENST00000556980 FAM98CQ17RN3 349 aaKnown RBP25.17■■□□□ 1.62
XRCC3-217ENST00000556980 EDC4Q6P2E9 1401 aaKnown RBP25.16■■□□□ 1.62
XRCC3-217ENST00000556980 KCNH5Q8NCM2 988 aa25.16■■□□□ 1.62
XRCC3-217ENST00000556980 CDCA8Q53HL2 280 aa25.15■■□□□ 1.62
XRCC3-217ENST00000556980 CAMTA1Q9Y6Y1 1673 aa25.14■■□□□ 1.62
XRCC3-217ENST00000556980 SOX12O15370 315 aa25.14■■□□□ 1.62
XRCC3-217ENST00000556980 SPATA31A1Q5TZJ5 1347 aa25.13■■□□□ 1.61
XRCC3-217ENST00000556980 NME9Q86XW9 330 aa25.13■■□□□ 1.61
XRCC3-217ENST00000556980 LMO7Q8WWI1 1683 aa25.13■■□□□ 1.61
XRCC3-217ENST00000556980 AATKQ6ZMQ8 1374 aa25.12■■□□□ 1.61
XRCC3-217ENST00000556980 USP31Q70CQ4 1352 aa25.11■■□□□ 1.61
XRCC3-217ENST00000556980 ZRANB1Q9UGI0 708 aa25.11■■□□□ 1.61
XRCC3-217ENST00000556980 LARP1Q6PKG0 1096 aaKnown RBP25.1■■□□□ 1.61
XRCC3-217ENST00000556980 USP35Q9P2H5 1018 aa25.1■■□□□ 1.61
XRCC3-217ENST00000556980 KRT27Q7Z3Y8 459 aa25.09■■□□□ 1.61
XRCC3-217ENST00000556980 COL5A2P05997 1499 aaPredicted RBP25.09■■□□□ 1.61
XRCC3-217ENST00000556980 ANKRD36BQ8N2N9 1353 aa25.08■■□□□ 1.61
XRCC3-217ENST00000556980 ARHGEF25Q86VW2 580 aa25.08■■□□□ 1.61
XRCC3-217ENST00000556980 NFAT5O94916 1531 aa25.07■■□□□ 1.6
XRCC3-217ENST00000556980 EIF4G2P78344 907 aaKnown RBP eCLIP25.05■■□□□ 1.6
XRCC3-217ENST00000556980 TCP11L2Q8N4U5 519 aa25.04■■□□□ 1.6
XRCC3-217ENST00000556980 BRWD3Q6RI45 1802 aa25.04■■□□□ 1.6
XRCC3-217ENST00000556980 USP54Q70EL1 1684 aa25.04■■□□□ 1.6
XRCC3-217ENST00000556980 THSD7AQ9UPZ6 1657 aa25.04■■□□□ 1.6
XRCC3-217ENST00000556980 BARGINQ6ZT62 677 aa25.03■■□□□ 1.6
XRCC3-217ENST00000556980 CCDC125Q86Z20 511 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms