RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 RALGAPBQ86X10 1494 aa9.14□□□□□ -0.95
ATXN3-245ENST00000556958 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-245ENST00000556958 KIF15Q9NS87 1388 aa9.13□□□□□ -0.95
ATXN3-245ENST00000556958 MIER1Q8N108 512 aa9.13□□□□□ -0.95
ATXN3-245ENST00000556958 DUOX2Q9NRD8 1548 aa9.13□□□□□ -0.95
ATXN3-245ENST00000556958 NINLQ9Y2I6 1382 aa9.12□□□□□ -0.95
ATXN3-245ENST00000556958 ARHGEF5Q12774 1597 aa9.12□□□□□ -0.95
ATXN3-245ENST00000556958 NPHP3Q7Z494 1330 aa9.12□□□□□ -0.95
ATXN3-245ENST00000556958 PLEKHG5O94827 1062 aa9.12□□□□□ -0.95
ATXN3-245ENST00000556958 EMP3P54852 163 aa9.12□□□□□ -0.95
ATXN3-245ENST00000556958 OCEL1Q9H607 264 aa9.12□□□□□ -0.95
ATXN3-245ENST00000556958 ERBINQ96RT1 1412 aa9.12□□□□□ -0.95
ATXN3-245ENST00000556958 EIF2AK4Q9P2K8 1649 aaKnown RBP9.12□□□□□ -0.95
ATXN3-245ENST00000556958 UNC13BO14795 1591 aa9.12□□□□□ -0.95
ATXN3-245ENST00000556958 ADGRB3O60242 1522 aa9.11□□□□□ -0.95
ATXN3-245ENST00000556958 C1orf167Q5SNV9 1468 aa9.11□□□□□ -0.95
ATXN3-245ENST00000556958 KCNQ2O43526 872 aa9.11□□□□□ -0.95
ATXN3-245ENST00000556958 HS3ST6Q96QI5 342 aa9.11□□□□□ -0.95
ATXN3-245ENST00000556958 HAP1P54257 671 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-245ENST00000556958 EZH2Q15910 746 aaKnown RBP9.1□□□□□ -0.95
ATXN3-245ENST00000556958 PTPRUQ92729 1446 aa9.1□□□□□ -0.95
ATXN3-245ENST00000556958 ADGRL3Q9HAR2 1447 aa9.1□□□□□ -0.95
ATXN3-245ENST00000556958 EHBP1L1Q8N3D4 1523 aa9.1□□□□□ -0.95
ATXN3-245ENST00000556958 MYOM2P54296 1465 aa9.09□□□□□ -0.95
ATXN3-245ENST00000556958 ESCO1Q5FWF5 840 aa9.09□□□□□ -0.95
ATXN3-245ENST00000556958 CAMKK2Q96RR4 588 aa9.09□□□□□ -0.95
ATXN3-245ENST00000556958 CHD2O14647 1828 aaKnown RBP9.09□□□□□ -0.95
ATXN3-245ENST00000556958 LRPPRCP42704 1394 aaKnown RBP9.09□□□□□ -0.95
ATXN3-245ENST00000556958 GIGYF1O75420 1035 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-245ENST00000556958 LMTK2Q8IWU2 1503 aa9.08□□□□□ -0.96
ATXN3-245ENST00000556958 MYOM3Q5VTT5 1437 aa9.07□□□□□ -0.96
ATXN3-245ENST00000556958 TRPM2O94759 1503 aa9.07□□□□□ -0.96
ATXN3-245ENST00000556958 FAM205CA6NFA0 338 aa9.07□□□□□ -0.96
ATXN3-245ENST00000556958 FOXO3O43524 673 aa9.07□□□□□ -0.96
ATXN3-245ENST00000556958 APBA3O96018 575 aa9.07□□□□□ -0.96
ATXN3-245ENST00000556958 NUBP1P53384 320 aa9.07□□□□□ -0.96
ATXN3-245ENST00000556958 PARD3Q8TEW0 1356 aa9.07□□□□□ -0.96
ATXN3-245ENST00000556958 DISP2A7MBM2 1401 aa9.06□□□□□ -0.96
ATXN3-245ENST00000556958 SLIT2O94813 1529 aa9.06□□□□□ -0.96
ATXN3-245ENST00000556958 FAM98CQ17RN3 349 aaKnown RBP9.06□□□□□ -0.96
ATXN3-245ENST00000556958 FAM196AQ6ZSG2 479 aa9.05□□□□□ -0.96
ATXN3-245ENST00000556958 CFAP65Q6ZU64 1925 aaKnown RBP9.05□□□□□ -0.96
ATXN3-245ENST00000556958 XPCQ01831 940 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-245ENST00000556958 CEP152O94986 1710 aa9.04□□□□□ -0.96
ATXN3-245ENST00000556958 METP08581 1390 aa9.03□□□□□ -0.96
ATXN3-245ENST00000556958 ANKRD30AQ9BXX3 1397 aa9.03□□□□□ -0.96
ATXN3-245ENST00000556958 TRIM37O94972 964 aa9.03□□□□□ -0.96
ATXN3-245ENST00000556958 FAM182BQ5T319 152 aa9.03□□□□□ -0.96
ATXN3-245ENST00000556958 GLI3P10071 1580 aa9.02□□□□□ -0.97
ATXN3-245ENST00000556958 SPATA31A3Q5VYP0 1347 aa9.02□□□□□ -0.97
ATXN3-245ENST00000556958 FAM83GA6ND36 823 aa9.01□□□□□ -0.97
ATXN3-245ENST00000556958 PSME1Q06323 249 aa9.01□□□□□ -0.97
ATXN3-245ENST00000556958 ZNF326Q5BKZ1 582 aaKnown RBP9.01□□□□□ -0.97
ATXN3-245ENST00000556958 CHIC2Q9UKJ5 165 aa9.01□□□□□ -0.97
ATXN3-245ENST00000556958 SPHKAPQ2M3C7 1700 aa9□□□□□ -0.97
ATXN3-245ENST00000556958 KRT28Q7Z3Y7 464 aa9□□□□□ -0.97
ATXN3-245ENST00000556958 PDCD7Q8N8D1 485 aaKnown RBP9□□□□□ -0.97
ATXN3-245ENST00000556958 ABCC5O15440 1437 aa8.98□□□□□ -0.97
ATXN3-245ENST00000556958 ADGRL2O95490 1459 aa8.98□□□□□ -0.97
ATXN3-245ENST00000556958 C3orf67Q6ZVT6 689 aa8.98□□□□□ -0.97
ATXN3-245ENST00000556958 SYT17Q9BSW7 474 aa8.98□□□□□ -0.97
ATXN3-245ENST00000556958 BTG4Q9NY30 223 aa8.98□□□□□ -0.97
ATXN3-245ENST00000556958 CEP350Q5VT06 3117 aa8.98□□□□□ -0.97
ATXN3-245ENST00000556958 COL22A1Q8NFW1 1626 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-245ENST00000556958 LMOD2Q6P5Q4 547 aa8.97□□□□□ -0.97
ATXN3-245ENST00000556958 PLCD3Q8N3E9 789 aa8.97□□□□□ -0.97
ATXN3-245ENST00000556958 CABLES1Q8TDN4 633 aa8.97□□□□□ -0.97
ATXN3-245ENST00000556958 FAM212AQ96EL1 285 aa8.97□□□□□ -0.97
ATXN3-245ENST00000556958 LAMC1P11047 1609 aa8.97□□□□□ -0.97
ATXN3-245ENST00000556958 PXDNQ92626 1479 aa8.96□□□□□ -0.97
ATXN3-245ENST00000556958 TMEM131LA2VDJ0 1609 aa8.96□□□□□ -0.98
ATXN3-245ENST00000556958 PDE3BQ13370 1112 aa8.96□□□□□ -0.98
ATXN3-245ENST00000556958 FHDC1Q9C0D6 1143 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-245ENST00000556958 FBXO3Q9UK99 471 aa8.96□□□□□ -0.98
ATXN3-245ENST00000556958 SPATA31A5Q5VU36 1347 aa8.96□□□□□ -0.98
ATXN3-245ENST00000556958 SPATA31A7Q8IWB4 1347 aa8.96□□□□□ -0.98
ATXN3-245ENST00000556958 C11orf95C9JLR9 678 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-245ENST00000556958 HSPA6P17066 643 aa8.95□□□□□ -0.98
ATXN3-245ENST00000556958 GPR162Q16538 588 aa8.95□□□□□ -0.98
ATXN3-245ENST00000556958 ROBO2Q9HCK4 1378 aa8.95□□□□□ -0.98
ATXN3-245ENST00000556958 HFM1A2PYH4 1435 aa8.95□□□□□ -0.98
ATXN3-245ENST00000556958 NUTM2FA1L443 756 aa8.94□□□□□ -0.98
ATXN3-245ENST00000556958 VGFO15240 615 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-245ENST00000556958 RNF166Q96A37 237 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-245ENST00000556958 CCDC144AA2RUR9 1427 aa8.94□□□□□ -0.98
ATXN3-245ENST00000556958 ZBTB7AO95365 584 aa8.93□□□□□ -0.98
ATXN3-245ENST00000556958 PTGER2P43116 358 aa8.93□□□□□ -0.98
ATXN3-245ENST00000556958 ZBTB47Q9UFB7 747 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-245ENST00000556958 ARHGEF10O15013 1369 aa8.93□□□□□ -0.98
ATXN3-245ENST00000556958 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.93□□□□□ -0.98
ATXN3-245ENST00000556958 XRN1Q8IZH2 1706 aaKnown RBP8.92□□□□□ -0.98
ATXN3-245ENST00000556958 DAPK1P53355 1430 aa8.92□□□□□ -0.98
ATXN3-245ENST00000556958 PCDHB8Q9UN66 801 aa8.92□□□□□ -0.98
ATXN3-245ENST00000556958 ADGRB2O60241 1585 aa8.91□□□□□ -0.98
ATXN3-245ENST00000556958 ANKRD50Q9ULJ7 1429 aa8.91□□□□□ -0.98
ATXN3-245ENST00000556958 PLSCR1O15162 318 aa8.91□□□□□ -0.98
ATXN3-245ENST00000556958 L3MBTL3Q96JM7 780 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-245ENST00000556958 BCL11BQ9C0K0 894 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-245ENST00000556958 SLC34A2O95436 690 aa8.9□□□□□ -0.98
ATXN3-245ENST00000556958 PYGBP11216 843 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms