RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 PRDM11Q9NQV5 511 aa24.8■■□□□ 1.56
CHGA-206ENST00000556876 PLEKHG3A1L390 1219 aa24.78■■□□□ 1.56
CHGA-206ENST00000556876 FAM98CQ17RN3 349 aaKnown RBP24.76■■□□□ 1.55
CHGA-206ENST00000556876 NBPF8Q3BBV2 869 aa24.76■■□□□ 1.55
CHGA-206ENST00000556876 SPATA31A5Q5VU36 1347 aa24.75■■□□□ 1.55
CHGA-206ENST00000556876 SPATA31A7Q8IWB4 1347 aa24.75■■□□□ 1.55
CHGA-206ENST00000556876 POLR3AO14802 1390 aaPredicted RBP24.75■■□□□ 1.55
CHGA-206ENST00000556876 ATP7BP35670 1465 aa24.75■■□□□ 1.55
CHGA-206ENST00000556876 BAG6P46379 1132 aa24.74■■□□□ 1.55
CHGA-206ENST00000556876 TRPM3Q9HCF6 1732 aaPredicted RBP24.73■■□□□ 1.55
CHGA-206ENST00000556876 ACEP12821 1306 aa24.73■■□□□ 1.55
CHGA-206ENST00000556876 BRD4O60885 1362 aaPredicted RBP24.72■■□□□ 1.55
CHGA-206ENST00000556876 COL14A1Q05707 1796 aaKnown RBP24.72■■□□□ 1.55
CHGA-206ENST00000556876 PLCH1Q4KWH8 1693 aa24.71■■□□□ 1.55
CHGA-206ENST00000556876 ALS2Q96Q42 1657 aa24.71■■□□□ 1.55
CHGA-206ENST00000556876 CENPJQ9HC77 1338 aaPredicted RBP24.7■■□□□ 1.54
CHGA-206ENST00000556876 SRPK2P78362 688 aaKnown RBP24.7■■□□□ 1.54
CHGA-206ENST00000556876 ABTB2Q8N961 1025 aa24.7■■□□□ 1.54
CHGA-206ENST00000556876 KIAA1210Q9ULL0 1709 aa24.69■■□□□ 1.54
CHGA-206ENST00000556876 NBPF1Q3BBV0 1214 aa24.69■■□□□ 1.54
CHGA-206ENST00000556876 DEFB132Q7Z7B7 95 aa24.69■■□□□ 1.54
CHGA-206ENST00000556876 NLRP13Q86W25 1043 aa24.69■■□□□ 1.54
CHGA-206ENST00000556876 ABCA3Q99758 1704 aa24.69■■□□□ 1.54
CHGA-206ENST00000556876 KIAA0232Q92628 1395 aa24.68■■□□□ 1.54
CHGA-206ENST00000556876 EVA1CP58658 441 aa24.68■■□□□ 1.54
CHGA-206ENST00000556876 ITSN1Q15811 1721 aa24.67■■□□□ 1.54
CHGA-206ENST00000556876 ARHGEF28Q8N1W1 1705 aaKnown RBP24.66■■□□□ 1.54
CHGA-206ENST00000556876 SPATA31A1Q5TZJ5 1347 aa24.66■■□□□ 1.54
CHGA-206ENST00000556876 ZC3H6P61129 1189 aaKnown RBP24.65■■□□□ 1.54
CHGA-206ENST00000556876 FAM196AQ6ZSG2 479 aa24.63■■□□□ 1.53
CHGA-206ENST00000556876 STRN4Q9NRL3 753 aa24.63■■□□□ 1.53
CHGA-206ENST00000556876 CPDO75976 1380 aa24.63■■□□□ 1.53
CHGA-206ENST00000556876 CHRNA2Q15822 529 aa24.62■■□□□ 1.53
CHGA-206ENST00000556876 BARGINQ6ZT62 677 aa24.62■■□□□ 1.53
CHGA-206ENST00000556876 C11orf95C9JLR9 678 aaPredicted RBP24.61■■□□□ 1.53
CHGA-206ENST00000556876 NUTM2GQ5VZR2 741 aa24.61■■□□□ 1.53
CHGA-206ENST00000556876 L3MBTL2Q969R5 705 aa24.61■■□□□ 1.53
CHGA-206ENST00000556876 THRAP3Q9Y2W1 955 aaKnown RBP24.61■■□□□ 1.53
CHGA-206ENST00000556876 NRAPQ86VF7 1730 aa24.61■■□□□ 1.53
CHGA-206ENST00000556876 USP19O94966 1318 aa24.61■■□□□ 1.53
CHGA-206ENST00000556876 PPIP5K1Q6PFW1 1433 aa24.6■■□□□ 1.53
CHGA-206ENST00000556876 EVC2Q86UK5 1308 aa24.6■■□□□ 1.53
CHGA-206ENST00000556876 BRWD3Q6RI45 1802 aa24.59■■□□□ 1.53
CHGA-206ENST00000556876 GCP02774 474 aa24.59■■□□□ 1.53
CHGA-206ENST00000556876 CABP2Q9NPB3 220 aa24.59■■□□□ 1.53
CHGA-206ENST00000556876 PDE3BQ13370 1112 aa24.58■■□□□ 1.53
CHGA-206ENST00000556876 TCP11L2Q8N4U5 519 aa24.57■■□□□ 1.52
CHGA-206ENST00000556876 ZNF692Q9BU19 519 aaPredicted RBP24.57■■□□□ 1.52
CHGA-206ENST00000556876 CABP1Q9NZU7 370 aa24.56■■□□□ 1.52
CHGA-206ENST00000556876 DISP2A7MBM2 1401 aa24.54■■□□□ 1.52
CHGA-206ENST00000556876 SSH2Q76I76 1423 aa24.54■■□□□ 1.52
CHGA-206ENST00000556876 NLRP6P59044 892 aa24.53■■□□□ 1.52
CHGA-206ENST00000556876 EN1Q05925 392 aaPredicted RBP24.53■■□□□ 1.52
CHGA-206ENST00000556876 USP35Q9P2H5 1018 aa24.53■■□□□ 1.52
CHGA-206ENST00000556876 PARD3Q8TEW0 1356 aa24.53■■□□□ 1.52
CHGA-206ENST00000556876 CRYBG1Q9Y4K1 1723 aa24.52■■□□□ 1.52
CHGA-206ENST00000556876 TOPAZ1Q8N9V7 1692 aa24.52■■□□□ 1.52
CHGA-206ENST00000556876 THSD7AQ9UPZ6 1657 aa24.5■■□□□ 1.51
CHGA-206ENST00000556876 FAM182BQ5T319 152 aa24.5■■□□□ 1.51
CHGA-206ENST00000556876 LARP1Q6PKG0 1096 aaKnown RBP24.5■■□□□ 1.51
CHGA-206ENST00000556876 ROCK2O75116 1388 aaKnown RBP24.5■■□□□ 1.51
CHGA-206ENST00000556876 USP6P35125 1406 aa24.5■■□□□ 1.51
CHGA-206ENST00000556876 TRIM37O94972 964 aa24.48■■□□□ 1.51
CHGA-206ENST00000556876 NEUROD1Q13562 356 aa24.48■■□□□ 1.51
CHGA-206ENST00000556876 AATKQ6ZMQ8 1374 aa24.48■■□□□ 1.51
CHGA-206ENST00000556876 KCNH5Q8NCM2 988 aa24.48■■□□□ 1.51
CHGA-206ENST00000556876 PHRF1Q9P1Y6 1649 aaKnown RBP24.48■■□□□ 1.51
CHGA-206ENST00000556876 APBA3O96018 575 aa24.47■■□□□ 1.51
CHGA-206ENST00000556876 SIN3AQ96ST3 1273 aa24.47■■□□□ 1.51
CHGA-206ENST00000556876 CAMTA1Q9Y6Y1 1673 aa24.46■■□□□ 1.51
CHGA-206ENST00000556876 CAMKK2Q96RR4 588 aa24.45■■□□□ 1.5
CHGA-206ENST00000556876 CDCA7Q9BWT1 371 aaPredicted RBP24.45■■□□□ 1.5
CHGA-206ENST00000556876 NRKQ7Z2Y5 1582 aa24.45■■□□□ 1.5
CHGA-206ENST00000556876 RGPD1P0DJD0 1748 aa24.44■■□□□ 1.5
CHGA-206ENST00000556876 TTC21AQ8NDW8 1320 aa24.44■■□□□ 1.5
CHGA-206ENST00000556876 CRB1P82279 1406 aa24.44■■□□□ 1.5
CHGA-206ENST00000556876 PSDA5PKW4 1024 aaPredicted RBP24.43■■□□□ 1.5
CHGA-206ENST00000556876 EZH2Q15910 746 aaKnown RBP24.42■■□□□ 1.5
CHGA-206ENST00000556876 NBPF14Q5TI25 921 aa24.42■■□□□ 1.5
CHGA-206ENST00000556876 COL5A2P05997 1499 aaPredicted RBP24.41■■□□□ 1.5
CHGA-206ENST00000556876 TTC21BQ7Z4L5 1316 aa24.4■■□□□ 1.5
CHGA-206ENST00000556876 TOM1L2Q6ZVM7 507 aa24.4■■□□□ 1.5
CHGA-206ENST00000556876 ZBTB7CA1YPR0 619 aa24.39■■□□□ 1.49
CHGA-206ENST00000556876 SLC24A1O60721 1099 aa24.39■■□□□ 1.49
CHGA-206ENST00000556876 R3HDM1Q15032 1099 aaKnown RBP24.39■■□□□ 1.49
CHGA-206ENST00000556876 QRICH2Q9H0J4 1663 aa24.39■■□□□ 1.49
CHGA-206ENST00000556876 SBNO2Q9Y2G9 1366 aa24.39■■□□□ 1.49
CHGA-206ENST00000556876 ARHGEF25Q86VW2 580 aa24.38■■□□□ 1.49
CHGA-206ENST00000556876 LMO7Q8WWI1 1683 aa24.37■■□□□ 1.49
CHGA-206ENST00000556876 DDB1Q16531 1140 aa24.37■■□□□ 1.49
CHGA-206ENST00000556876 WDR17Q8IZU2 1322 aa24.36■■□□□ 1.49
CHGA-206ENST00000556876 SLIT3O75094 1523 aa24.36■■□□□ 1.49
CHGA-206ENST00000556876 LRP5O75197 1615 aa24.35■■□□□ 1.49
CHGA-206ENST00000556876 CARD11Q9BXL7 1154 aa24.35■■□□□ 1.49
CHGA-206ENST00000556876 KTN1Q86UP2 1357 aaKnown RBP24.34■■□□□ 1.49
CHGA-206ENST00000556876 PUS7Q96PZ0 661 aaKnown RBP24.34■■□□□ 1.49
CHGA-206ENST00000556876 TRPM1Q7Z4N2 1603 aa24.34■■□□□ 1.49
CHGA-206ENST00000556876 CPSF1Q10570 1443 aaKnown RBP24.34■■□□□ 1.49
CHGA-206ENST00000556876 CARD10Q9BWT7 1032 aa24.33■■□□□ 1.49
CHGA-206ENST00000556876 OVOS2A0A0G2JMS6 1433 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms