RNA–Protein interactions for RNA: ENST00000556871.5

UBR7-207, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 4

Gene UBR7, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-207ENST00000556871 NPHP3Q7Z494 1330 aa25.25■■□□□ 1.63
UBR7-207ENST00000556871 NRKQ7Z2Y5 1582 aa25.25■■□□□ 1.63
UBR7-207ENST00000556871 SOS2Q07890 1332 aaPredicted RBP25.23■■□□□ 1.63
UBR7-207ENST00000556871 KNSTRNQ9Y448 316 aa25.23■■□□□ 1.63
UBR7-207ENST00000556871 TRPM3Q9HCF6 1732 aaPredicted RBP25.23■■□□□ 1.63
UBR7-207ENST00000556871 BRD4O60885 1362 aaPredicted RBP25.22■■□□□ 1.63
UBR7-207ENST00000556871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.22■■□□□ 1.63
UBR7-207ENST00000556871 FYB1O15117 783 aa25.21■■□□□ 1.63
UBR7-207ENST00000556871 AHDC1Q5TGY3 1603 aaPredicted RBP25.2■■□□□ 1.62
UBR7-207ENST00000556871 NME9Q86XW9 330 aa25.2■■□□□ 1.62
UBR7-207ENST00000556871 ZRANB1Q9UGI0 708 aa25.2■■□□□ 1.62
UBR7-207ENST00000556871 SBNO1A3KN83 1393 aa25.19■■□□□ 1.62
UBR7-207ENST00000556871 TTC21AQ8NDW8 1320 aa25.19■■□□□ 1.62
UBR7-207ENST00000556871 SCAF1Q9H7N4 1312 aaKnown RBP25.19■■□□□ 1.62
UBR7-207ENST00000556871 NPC1L1Q9UHC9 1359 aa25.18■■□□□ 1.62
UBR7-207ENST00000556871 CGNL1Q0VF96 1302 aa25.17■■□□□ 1.62
UBR7-207ENST00000556871 PAK3O75914 559 aaPredicted RBP25.17■■□□□ 1.62
UBR7-207ENST00000556871 SPATA31A3Q5VYP0 1347 aa25.16■■□□□ 1.62
UBR7-207ENST00000556871 HSPA1LP34931 641 aa25.16■■□□□ 1.62
UBR7-207ENST00000556871 DIEXFQ68CQ4 756 aaKnown RBP25.16■■□□□ 1.62
UBR7-207ENST00000556871 GGNBP2Q9H3C7 697 aa25.16■■□□□ 1.62
UBR7-207ENST00000556871 CC2D1BQ5T0F9 858 aaKnown RBP25.14■■□□□ 1.62
UBR7-207ENST00000556871 USP31Q70CQ4 1352 aa25.14■■□□□ 1.61
UBR7-207ENST00000556871 PIK3C2AO00443 1686 aa25.13■■□□□ 1.61
UBR7-207ENST00000556871 ALS2Q96Q42 1657 aa25.13■■□□□ 1.61
UBR7-207ENST00000556871 COL16A1Q07092 1604 aaPredicted RBP25.13■■□□□ 1.61
UBR7-207ENST00000556871 PHLPP1O60346 1717 aa25.12■■□□□ 1.61
UBR7-207ENST00000556871 ABTB2Q8N961 1025 aa25.12■■□□□ 1.61
UBR7-207ENST00000556871 TNS3Q68CZ2 1445 aa25.12■■□□□ 1.61
UBR7-207ENST00000556871 CNGB1Q14028 1251 aaPredicted RBP25.11■■□□□ 1.61
UBR7-207ENST00000556871 NUTM2GQ5VZR2 741 aa25.11■■□□□ 1.61
UBR7-207ENST00000556871 MARF1Q9Y4F3 1742 aaKnown RBP25.11■■□□□ 1.61
UBR7-207ENST00000556871 NSD2O96028 1365 aa25.1■■□□□ 1.61
UBR7-207ENST00000556871 NLRP6P59044 892 aa25.09■■□□□ 1.61
UBR7-207ENST00000556871 OVOS2A0A0J9YW53 1432 aa25.09■■□□□ 1.61
UBR7-207ENST00000556871 OVOS2Q6IE36 1432 aa25.09■■□□□ 1.61
UBR7-207ENST00000556871 KIF20BQ96Q89 1820 aa25.09■■□□□ 1.61
UBR7-207ENST00000556871 LRRC59Q96AG4 307 aaKnown RBP25.08■■□□□ 1.61
UBR7-207ENST00000556871 MED1Q15648 1581 aaPredicted RBP25.08■■□□□ 1.61
UBR7-207ENST00000556871 LMOD2Q6P5Q4 547 aa25.07■■□□□ 1.6
UBR7-207ENST00000556871 PARD3Q8TEW0 1356 aa25.06■■□□□ 1.6
UBR7-207ENST00000556871 PRKRIP1Q9H875 184 aaPredicted RBP25.06■■□□□ 1.6
UBR7-207ENST00000556871 USP54Q70EL1 1684 aa25.06■■□□□ 1.6
UBR7-207ENST00000556871 MORC1Q86VD1 984 aa25.05■■□□□ 1.6
UBR7-207ENST00000556871 COG3Q96JB2 828 aa25.05■■□□□ 1.6
UBR7-207ENST00000556871 ARHGEF10O15013 1369 aa25.05■■□□□ 1.6
UBR7-207ENST00000556871 NLRP13Q86W25 1043 aa25.04■■□□□ 1.6
UBR7-207ENST00000556871 USP19O94966 1318 aa25.04■■□□□ 1.6
UBR7-207ENST00000556871 SOCS7O14512 581 aa25.03■■□□□ 1.6
UBR7-207ENST00000556871 ANKRD26Q9UPS8 1709 aa25.03■■□□□ 1.6
UBR7-207ENST00000556871 FBLN1P23142 703 aa25.02■■□□□ 1.6
UBR7-207ENST00000556871 CRYBG1Q9Y4K1 1723 aa25.02■■□□□ 1.6
UBR7-207ENST00000556871 PNPLA6Q8IY17 1366 aa25.02■■□□□ 1.6
UBR7-207ENST00000556871 RALBP1Q15311 655 aa25.01■■□□□ 1.59
UBR7-207ENST00000556871 CABLES1Q8TDN4 633 aa25.01■■□□□ 1.59
UBR7-207ENST00000556871 ANP32CO43423 234 aa25■■□□□ 1.59
UBR7-207ENST00000556871 SLIT3O75094 1523 aa25■■□□□ 1.59
UBR7-207ENST00000556871 TNNT2P45379 298 aaPredicted RBP24.99■■□□□ 1.59
UBR7-207ENST00000556871 PLEKHG5O94827 1062 aa24.98■■□□□ 1.59
UBR7-207ENST00000556871 COL22A1Q8NFW1 1626 aaPredicted RBP24.97■■□□□ 1.59
UBR7-207ENST00000556871 GCP02774 474 aa24.97■■□□□ 1.59
UBR7-207ENST00000556871 PPP2R1AP30153 589 aa24.97■■□□□ 1.59
UBR7-207ENST00000556871 MIER1Q8N108 512 aa24.96■■□□□ 1.59
UBR7-207ENST00000556871 AATKQ6ZMQ8 1374 aa24.95■■□□□ 1.59
UBR7-207ENST00000556871 NFAT5O94916 1531 aa24.95■■□□□ 1.58
UBR7-207ENST00000556871 ABCA3Q99758 1704 aa24.95■■□□□ 1.58
UBR7-207ENST00000556871 SOX12O15370 315 aa24.94■■□□□ 1.58
UBR7-207ENST00000556871 SHPRHQ149N8 1683 aa24.94■■□□□ 1.58
UBR7-207ENST00000556871 PHRF1Q9P1Y6 1649 aaKnown RBP24.94■■□□□ 1.58
UBR7-207ENST00000556871 KCNH5Q8NCM2 988 aa24.93■■□□□ 1.58
UBR7-207ENST00000556871 POLKQ9UBT6 870 aa24.93■■□□□ 1.58
UBR7-207ENST00000556871 JCADQ9P266 1359 aa24.93■■□□□ 1.58
UBR7-207ENST00000556871 MYBBP1AQ9BQG0 1328 aaKnown RBP24.91■■□□□ 1.58
UBR7-207ENST00000556871 RRS1Q15050 365 aaKnown RBP24.91■■□□□ 1.58
UBR7-207ENST00000556871 MAP3K19Q56UN5 1328 aa24.89■■□□□ 1.58
UBR7-207ENST00000556871 ARHGEF25Q86VW2 580 aa24.89■■□□□ 1.58
UBR7-207ENST00000556871 EMILIN1Q9Y6C2 1016 aa24.89■■□□□ 1.58
UBR7-207ENST00000556871 MTHFSP49914 203 aa24.88■■□□□ 1.57
UBR7-207ENST00000556871 ZC3H6P61129 1189 aaKnown RBP24.87■■□□□ 1.57
UBR7-207ENST00000556871 CCDC184Q52MB2 194 aa24.87■■□□□ 1.57
UBR7-207ENST00000556871 SMG6Q86US8 1419 aaKnown RBP24.86■■□□□ 1.57
UBR7-207ENST00000556871 MAP2P11137 1827 aaKnown RBP24.86■■□□□ 1.57
UBR7-207ENST00000556871 CPDO75976 1380 aa24.85■■□□□ 1.57
UBR7-207ENST00000556871 PEAK1Q9H792 1746 aa24.84■■□□□ 1.57
UBR7-207ENST00000556871 KIAA0232Q92628 1395 aa24.83■■□□□ 1.57
UBR7-207ENST00000556871 NUTM2BA6NNL0 878 aaPredicted RBP24.82■■□□□ 1.56
UBR7-207ENST00000556871 NUTM2EB1AL46 878 aaPredicted RBP24.82■■□□□ 1.56
UBR7-207ENST00000556871 NUTM2AQ8IVF1 878 aaPredicted RBP24.82■■□□□ 1.56
UBR7-207ENST00000556871 SPATA31A6Q5VVP1 1343 aa24.82■■□□□ 1.56
UBR7-207ENST00000556871 HAP1P54257 671 aaPredicted RBP24.81■■□□□ 1.56
UBR7-207ENST00000556871 INSRP06213 1382 aa24.8■■□□□ 1.56
UBR7-207ENST00000556871 LTN1O94822 1766 aa24.8■■□□□ 1.56
UBR7-207ENST00000556871 COL18A1P39060 1754 aa24.8■■□□□ 1.56
UBR7-207ENST00000556871 FAM83GA6ND36 823 aa24.8■■□□□ 1.56
UBR7-207ENST00000556871 PPM1GO15355 546 aaPredicted RBP24.8■■□□□ 1.56
UBR7-207ENST00000556871 HOXC9P31274 260 aa24.8■■□□□ 1.56
UBR7-207ENST00000556871 CHRNA2Q15822 529 aa24.8■■□□□ 1.56
UBR7-207ENST00000556871 IP6K1Q92551 441 aa24.8■■□□□ 1.56
UBR7-207ENST00000556871 AXIN2Q9Y2T1 843 aa24.8■■□□□ 1.56
UBR7-207ENST00000556871 LRP6O75581 1613 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms