RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 A0A1W2PP64 1363 aa24.29■■□□□ 1.48
PSEN1-218ENST00000556864 SLC12A5Q9H2X9 1139 aa24.29■■□□□ 1.48
PSEN1-218ENST00000556864 ALS2Q96Q42 1657 aa24.29■■□□□ 1.48
PSEN1-218ENST00000556864 KIF7Q2M1P5 1343 aa24.29■■□□□ 1.48
PSEN1-218ENST00000556864 SPATA31A3Q5VYP0 1347 aa24.29■■□□□ 1.48
PSEN1-218ENST00000556864 PNPLA6Q8IY17 1366 aa24.29■■□□□ 1.48
PSEN1-218ENST00000556864 EDC4Q6P2E9 1401 aaKnown RBP24.27■■□□□ 1.48
PSEN1-218ENST00000556864 CCDC7Q96M83 1385 aa24.27■■□□□ 1.48
PSEN1-218ENST00000556864 MED1Q15648 1581 aaPredicted RBP24.26■■□□□ 1.47
PSEN1-218ENST00000556864 PAK3O75914 559 aaPredicted RBP24.25■■□□□ 1.47
PSEN1-218ENST00000556864 SPATA31A6Q5VVP1 1343 aa24.24■■□□□ 1.47
PSEN1-218ENST00000556864 SSH2Q76I76 1423 aa24.24■■□□□ 1.47
PSEN1-218ENST00000556864 TTC21AQ8NDW8 1320 aa24.23■■□□□ 1.47
PSEN1-218ENST00000556864 C11orf95C9JLR9 678 aaPredicted RBP24.22■■□□□ 1.47
PSEN1-218ENST00000556864 LMOD2Q6P5Q4 547 aa24.22■■□□□ 1.47
PSEN1-218ENST00000556864 PIK3C2AO00443 1686 aa24.21■■□□□ 1.47
PSEN1-218ENST00000556864 TTC21BQ7Z4L5 1316 aa24.2■■□□□ 1.46
PSEN1-218ENST00000556864 ABCA3Q99758 1704 aa24.19■■□□□ 1.46
PSEN1-218ENST00000556864 WASHC2AQ641Q2 1341 aa24.19■■□□□ 1.46
PSEN1-218ENST00000556864 USP54Q70EL1 1684 aa24.17■■□□□ 1.46
PSEN1-218ENST00000556864 NSD3Q9BZ95 1437 aa24.17■■□□□ 1.46
PSEN1-218ENST00000556864 ABTB2Q8N961 1025 aa24.16■■□□□ 1.46
PSEN1-218ENST00000556864 PHRF1Q9P1Y6 1649 aaKnown RBP24.16■■□□□ 1.46
PSEN1-218ENST00000556864 CRYBG1Q9Y4K1 1723 aa24.15■■□□□ 1.46
PSEN1-218ENST00000556864 HAP1P54257 671 aaPredicted RBP24.14■■□□□ 1.45
PSEN1-218ENST00000556864 KIF20BQ96Q89 1820 aa24.13■■□□□ 1.45
PSEN1-218ENST00000556864 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.13■■□□□ 1.45
PSEN1-218ENST00000556864 LRP6O75581 1613 aa24.13■■□□□ 1.45
PSEN1-218ENST00000556864 NLRP13Q86W25 1043 aa24.12■■□□□ 1.45
PSEN1-218ENST00000556864 USP19O94966 1318 aa24.11■■□□□ 1.45
PSEN1-218ENST00000556864 SLIT3O75094 1523 aa24.11■■□□□ 1.45
PSEN1-218ENST00000556864 USP31Q70CQ4 1352 aa24.11■■□□□ 1.45
PSEN1-218ENST00000556864 NUTM2BA6NNL0 878 aaPredicted RBP24.1■■□□□ 1.45
PSEN1-218ENST00000556864 NUTM2EB1AL46 878 aaPredicted RBP24.1■■□□□ 1.45
PSEN1-218ENST00000556864 NUTM2AQ8IVF1 878 aaPredicted RBP24.1■■□□□ 1.45
PSEN1-218ENST00000556864 PANK3Q9H999 370 aa24.1■■□□□ 1.45
PSEN1-218ENST00000556864 NLRP6P59044 892 aa24.09■■□□□ 1.45
PSEN1-218ENST00000556864 OVOS2A0A0J9YW53 1432 aa24.09■■□□□ 1.45
PSEN1-218ENST00000556864 OVOS2Q6IE36 1432 aa24.09■■□□□ 1.45
PSEN1-218ENST00000556864 CGNL1Q0VF96 1302 aa24.09■■□□□ 1.45
PSEN1-218ENST00000556864 MARF1Q9Y4F3 1742 aaKnown RBP24.08■■□□□ 1.45
PSEN1-218ENST00000556864 MEX3CQ5U5Q3 659 aaKnown RBP24.08■■□□□ 1.45
PSEN1-218ENST00000556864 NUTM2GQ5VZR2 741 aa24.08■■□□□ 1.45
PSEN1-218ENST00000556864 NME9Q86XW9 330 aa24.08■■□□□ 1.45
PSEN1-218ENST00000556864 CARD14Q9BXL6 1004 aa24.07■■□□□ 1.44
PSEN1-218ENST00000556864 NSD2O96028 1365 aa24.06■■□□□ 1.44
PSEN1-218ENST00000556864 PLEKHG5O94827 1062 aa24.06■■□□□ 1.44
PSEN1-218ENST00000556864 ANKRD26Q9UPS8 1709 aa24.04■■□□□ 1.44
PSEN1-218ENST00000556864 CABLES1Q8TDN4 633 aa24.04■■□□□ 1.44
PSEN1-218ENST00000556864 COG3Q96JB2 828 aa24.04■■□□□ 1.44
PSEN1-218ENST00000556864 KCNH5Q8NCM2 988 aa24.03■■□□□ 1.44
PSEN1-218ENST00000556864 KNSTRNQ9Y448 316 aa24.03■■□□□ 1.44
PSEN1-218ENST00000556864 NFAT5O94916 1531 aa24.02■■□□□ 1.44
PSEN1-218ENST00000556864 ZNF316A6NFI3 1004 aaPredicted RBP24.01■■□□□ 1.43
PSEN1-218ENST00000556864 ADAMTS2O95450 1211 aa24.01■■□□□ 1.43
PSEN1-218ENST00000556864 COL14A1Q05707 1796 aaKnown RBP24■■□□□ 1.43
PSEN1-218ENST00000556864 CPDO75976 1380 aa24■■□□□ 1.43
PSEN1-218ENST00000556864 FYB1O15117 783 aa23.99■■□□□ 1.43
PSEN1-218ENST00000556864 GCP02774 474 aa23.99■■□□□ 1.43
PSEN1-218ENST00000556864 GGNBP2Q9H3C7 697 aa23.98■■□□□ 1.43
PSEN1-218ENST00000556864 ZRANB1Q9UGI0 708 aa23.98■■□□□ 1.43
PSEN1-218ENST00000556864 ABCC6O95255 1503 aa23.98■■□□□ 1.43
PSEN1-218ENST00000556864 PLCH1Q4KWH8 1693 aa23.98■■□□□ 1.43
PSEN1-218ENST00000556864 KIAA0232Q92628 1395 aa23.97■■□□□ 1.43
PSEN1-218ENST00000556864 C8orf37Q96NL8 207 aa23.96■■□□□ 1.43
PSEN1-218ENST00000556864 PHF23Q9BUL5 403 aaPredicted RBP23.96■■□□□ 1.43
PSEN1-218ENST00000556864 PRDM11Q9NQV5 511 aa23.96■■□□□ 1.43
PSEN1-218ENST00000556864 NPC1L1Q9UHC9 1359 aa23.95■■□□□ 1.42
PSEN1-218ENST00000556864 NWD2Q9ULI1 1742 aa23.95■■□□□ 1.42
PSEN1-218ENST00000556864 SOX12O15370 315 aa23.94■■□□□ 1.42
PSEN1-218ENST00000556864 NGLY1Q96IV0 654 aa23.93■■□□□ 1.42
PSEN1-218ENST00000556864 ZC3H6P61129 1189 aaKnown RBP23.92■■□□□ 1.42
PSEN1-218ENST00000556864 SLIT2O94813 1529 aa23.92■■□□□ 1.42
PSEN1-218ENST00000556864 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.91■■□□□ 1.42
PSEN1-218ENST00000556864 PER1O15534 1290 aaPredicted RBP23.91■■□□□ 1.42
PSEN1-218ENST00000556864 AMER1Q5JTC6 1135 aaPredicted RBP23.91■■□□□ 1.42
PSEN1-218ENST00000556864 LMO7Q8WWI1 1683 aa23.91■■□□□ 1.42
PSEN1-218ENST00000556864 LTN1O94822 1766 aa23.91■■□□□ 1.42
PSEN1-218ENST00000556864 AFF2P51816 1311 aa23.9■■□□□ 1.42
PSEN1-218ENST00000556864 AATKQ6ZMQ8 1374 aa23.9■■□□□ 1.42
PSEN1-218ENST00000556864 ZBTB7CA1YPR0 619 aa23.89■■□□□ 1.41
PSEN1-218ENST00000556864 RTL1A6NKG5 1358 aa23.89■■□□□ 1.41
PSEN1-218ENST00000556864 NRAPQ86VF7 1730 aa23.88■■□□□ 1.41
PSEN1-218ENST00000556864 DDX10Q13206 875 aaKnown RBP23.88■■□□□ 1.41
PSEN1-218ENST00000556864 MORC1Q86VD1 984 aa23.88■■□□□ 1.41
PSEN1-218ENST00000556864 ARHGEF25Q86VW2 580 aa23.87■■□□□ 1.41
PSEN1-218ENST00000556864 FAM83GA6ND36 823 aa23.86■■□□□ 1.41
PSEN1-218ENST00000556864 CHRNA2Q15822 529 aa23.86■■□□□ 1.41
PSEN1-218ENST00000556864 ZNF772Q68DY9 489 aaPredicted RBP23.86■■□□□ 1.41
PSEN1-218ENST00000556864 FNBP4Q8N3X1 1017 aaPredicted RBP23.86■■□□□ 1.41
PSEN1-218ENST00000556864 KIF24Q5T7B8 1368 aa23.85■■□□□ 1.41
PSEN1-218ENST00000556864 BLMP54132 1417 aaPredicted RBP23.84■■□□□ 1.41
PSEN1-218ENST00000556864 CC2D1BQ5T0F9 858 aaKnown RBP23.84■■□□□ 1.41
PSEN1-218ENST00000556864 USP21Q9UK80 565 aa23.84■■□□□ 1.41
PSEN1-218ENST00000556864 MAP3K19Q56UN5 1328 aa23.84■■□□□ 1.41
PSEN1-218ENST00000556864 COL18A1P39060 1754 aa23.83■■□□□ 1.41
PSEN1-218ENST00000556864 BCL9LQ86UU0 1499 aa23.83■■□□□ 1.41
PSEN1-218ENST00000556864 COL5A2P05997 1499 aaPredicted RBP23.82■■□□□ 1.4
PSEN1-218ENST00000556864 BTG4Q9NY30 223 aa23.82■■□□□ 1.4
PSEN1-218ENST00000556864 SMG6Q86US8 1419 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms