RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 CCDC9Q9Y3X0 531 aaKnown RBP22.97■■□□□ 1.27
TGFB3-206ENST00000556674 PLCH1Q4KWH8 1693 aa22.97■■□□□ 1.27
TGFB3-206ENST00000556674 QRICH2Q9H0J4 1663 aa22.97■■□□□ 1.27
TGFB3-206ENST00000556674 HAP1P54257 671 aaPredicted RBP22.96■■□□□ 1.27
TGFB3-206ENST00000556674 CABLES1Q8TDN4 633 aa22.96■■□□□ 1.27
TGFB3-206ENST00000556674 ATP7BP35670 1465 aa22.95■■□□□ 1.26
TGFB3-206ENST00000556674 NWD2Q9ULI1 1742 aa22.94■■□□□ 1.26
TGFB3-206ENST00000556674 SBNO1A3KN83 1393 aa22.94■■□□□ 1.26
TGFB3-206ENST00000556674 PRR36Q9H6K5 1346 aa22.94■■□□□ 1.26
TGFB3-206ENST00000556674 PLEKHG5O94827 1062 aa22.94■■□□□ 1.26
TGFB3-206ENST00000556674 BAG6P46379 1132 aa22.94■■□□□ 1.26
TGFB3-206ENST00000556674 CDK19Q9BWU1 502 aa22.94■■□□□ 1.26
TGFB3-206ENST00000556674 TNS3Q68CZ2 1445 aa22.93■■□□□ 1.26
TGFB3-206ENST00000556674 NUDT16Q96DE0 195 aaKnown RBP22.93■■□□□ 1.26
TGFB3-206ENST00000556674 CARD11Q9BXL7 1154 aa22.93■■□□□ 1.26
TGFB3-206ENST00000556674 CCDC61Q9Y6R9 512 aa22.91■■□□□ 1.26
TGFB3-206ENST00000556674 EVC2Q86UK5 1308 aa22.9■■□□□ 1.26
TGFB3-206ENST00000556674 PMFBP1Q8TBY8 1022 aa22.9■■□□□ 1.26
TGFB3-206ENST00000556674 ABCA3Q99758 1704 aa22.9■■□□□ 1.26
TGFB3-206ENST00000556674 ARHGEF10O15013 1369 aa22.89■■□□□ 1.26
TGFB3-206ENST00000556674 SBNO2Q9Y2G9 1366 aa22.89■■□□□ 1.26
TGFB3-206ENST00000556674 A0A0G2JS52 829 aa22.89■■□□□ 1.25
TGFB3-206ENST00000556674 MYT1Q01538 1121 aa22.89■■□□□ 1.25
TGFB3-206ENST00000556674 NGDNQ8NEJ9 315 aaKnown RBP22.89■■□□□ 1.25
TGFB3-206ENST00000556674 TOPAZ1Q8N9V7 1692 aa22.89■■□□□ 1.25
TGFB3-206ENST00000556674 SRPK2P78362 688 aaKnown RBP22.88■■□□□ 1.25
TGFB3-206ENST00000556674 FAM83GA6ND36 823 aa22.87■■□□□ 1.25
TGFB3-206ENST00000556674 EN1Q05925 392 aaPredicted RBP22.87■■□□□ 1.25
TGFB3-206ENST00000556674 CCER1Q8TC90 406 aaPredicted RBP22.87■■□□□ 1.25
TGFB3-206ENST00000556674 FAM98CQ17RN3 349 aaKnown RBP22.86■■□□□ 1.25
TGFB3-206ENST00000556674 LMOD2Q6P5Q4 547 aa22.86■■□□□ 1.25
TGFB3-206ENST00000556674 PLEKHG3A1L390 1219 aa22.85■■□□□ 1.25
TGFB3-206ENST00000556674 SLC24A1O60721 1099 aa22.85■■□□□ 1.25
TGFB3-206ENST00000556674 R3HDM1Q15032 1099 aaKnown RBP22.85■■□□□ 1.25
TGFB3-206ENST00000556674 POLR3AO14802 1390 aaPredicted RBP22.85■■□□□ 1.25
TGFB3-206ENST00000556674 NRAPQ86VF7 1730 aa22.84■■□□□ 1.25
TGFB3-206ENST00000556674 TRPM3Q9HCF6 1732 aaPredicted RBP22.84■■□□□ 1.25
TGFB3-206ENST00000556674 RGPD1P0DJD0 1748 aa22.83■■□□□ 1.25
TGFB3-206ENST00000556674 FAM182BQ5T319 152 aa22.82■■□□□ 1.24
TGFB3-206ENST00000556674 PPIP5K1Q6PFW1 1433 aa22.82■■□□□ 1.24
TGFB3-206ENST00000556674 CABP2Q9NPB3 220 aa22.81■■□□□ 1.24
TGFB3-206ENST00000556674 BRD4O60885 1362 aaPredicted RBP22.8■■□□□ 1.24
TGFB3-206ENST00000556674 BTG4Q9NY30 223 aa22.8■■□□□ 1.24
TGFB3-206ENST00000556674 ALS2Q96Q42 1657 aa22.8■■□□□ 1.24
TGFB3-206ENST00000556674 ACEP12821 1306 aa22.8■■□□□ 1.24
TGFB3-206ENST00000556674 DISP2A7MBM2 1401 aa22.77■■□□□ 1.24
TGFB3-206ENST00000556674 TNS1Q9HBL0 1735 aaKnown RBP22.77■■□□□ 1.23
TGFB3-206ENST00000556674 PAK3O75914 559 aaPredicted RBP22.76■■□□□ 1.23
TGFB3-206ENST00000556674 EZH2Q15910 746 aaKnown RBP22.75■■□□□ 1.23
TGFB3-206ENST00000556674 PUS7Q96PZ0 661 aaKnown RBP22.75■■□□□ 1.23
TGFB3-206ENST00000556674 COL14A1Q05707 1796 aaKnown RBP22.74■■□□□ 1.23
TGFB3-206ENST00000556674 CABP1Q9NZU7 370 aa22.73■■□□□ 1.23
TGFB3-206ENST00000556674 SPATA31A5Q5VU36 1347 aa22.73■■□□□ 1.23
TGFB3-206ENST00000556674 SPATA31A7Q8IWB4 1347 aa22.73■■□□□ 1.23
TGFB3-206ENST00000556674 THSD7AQ9UPZ6 1657 aa22.72■■□□□ 1.23
TGFB3-206ENST00000556674 ZNF692Q9BU19 519 aaPredicted RBP22.72■■□□□ 1.23
TGFB3-206ENST00000556674 ST20-MTHFSA0A0A6YYL1 179 aa22.7■■□□□ 1.22
TGFB3-206ENST00000556674 CAMKK2Q96RR4 588 aa22.7■■□□□ 1.22
TGFB3-206ENST00000556674 USP47Q96K76 1375 aa22.7■■□□□ 1.22
TGFB3-206ENST00000556674 USP6P35125 1406 aa22.69■■□□□ 1.22
TGFB3-206ENST00000556674 YY1P25490 414 aa22.69■■□□□ 1.22
TGFB3-206ENST00000556674 TRIM37O94972 964 aa22.67■■□□□ 1.22
TGFB3-206ENST00000556674 TESK2Q96S53 571 aa22.67■■□□□ 1.22
TGFB3-206ENST00000556674 CRYBG1Q9Y4K1 1723 aa22.67■■□□□ 1.22
TGFB3-206ENST00000556674 NINLQ9Y2I6 1382 aa22.66■■□□□ 1.22
TGFB3-206ENST00000556674 ABTB2Q8N961 1025 aa22.66■■□□□ 1.22
TGFB3-206ENST00000556674 AKAP12Q02952 1782 aa22.65■■□□□ 1.22
TGFB3-206ENST00000556674 CPSF1Q10570 1443 aaKnown RBP22.65■■□□□ 1.22
TGFB3-206ENST00000556674 NLRP13Q86W25 1043 aa22.64■■□□□ 1.21
TGFB3-206ENST00000556674 APBA3O96018 575 aa22.63■■□□□ 1.21
TGFB3-206ENST00000556674 TMF1P82094 1093 aa22.63■■□□□ 1.21
TGFB3-206ENST00000556674 CDCA8Q53HL2 280 aa22.63■■□□□ 1.21
TGFB3-206ENST00000556674 FAM196AQ6ZSG2 479 aa22.63■■□□□ 1.21
TGFB3-206ENST00000556674 PHRF1Q9P1Y6 1649 aaKnown RBP22.63■■□□□ 1.21
TGFB3-206ENST00000556674 SSH2Q76I76 1423 aa22.63■■□□□ 1.21
TGFB3-206ENST00000556674 TTC21AQ8NDW8 1320 aa22.62■■□□□ 1.21
TGFB3-206ENST00000556674 PRDM11Q9NQV5 511 aa22.62■■□□□ 1.21
TGFB3-206ENST00000556674 PARD3Q8TEW0 1356 aa22.62■■□□□ 1.21
TGFB3-206ENST00000556674 SPATA31A1Q5TZJ5 1347 aa22.61■■□□□ 1.21
TGFB3-206ENST00000556674 KTN1Q86UP2 1357 aaKnown RBP22.61■■□□□ 1.21
TGFB3-206ENST00000556674 USP19O94966 1318 aa22.6■■□□□ 1.21
TGFB3-206ENST00000556674 HDGFL2Q7Z4V5 671 aaPredicted RBP22.6■■□□□ 1.21
TGFB3-206ENST00000556674 TERF2IPQ9NYB0 399 aa22.6■■□□□ 1.21
TGFB3-206ENST00000556674 RREB1Q92766 1687 aa22.6■■□□□ 1.21
TGFB3-206ENST00000556674 TMC1Q8TDI8 760 aa22.59■■□□□ 1.21
TGFB3-206ENST00000556674 MON2Q7Z3U7 1717 aa22.59■■□□□ 1.21
TGFB3-206ENST00000556674 NUP188Q5SRE5 1749 aa22.58■■□□□ 1.21
TGFB3-206ENST00000556674 NRKQ7Z2Y5 1582 aa22.58■■□□□ 1.2
TGFB3-206ENST00000556674 TTC21BQ7Z4L5 1316 aa22.57■■□□□ 1.2
TGFB3-206ENST00000556674 KIAA0232Q92628 1395 aa22.56■■□□□ 1.2
TGFB3-206ENST00000556674 NLRP6P59044 892 aa22.56■■□□□ 1.2
TGFB3-206ENST00000556674 CHRNA2Q15822 529 aa22.56■■□□□ 1.2
TGFB3-206ENST00000556674 NUTM2GQ5VZR2 741 aa22.56■■□□□ 1.2
TGFB3-206ENST00000556674 STRN4Q9NRL3 753 aa22.56■■□□□ 1.2
TGFB3-206ENST00000556674 CPDO75976 1380 aa22.55■■□□□ 1.2
TGFB3-206ENST00000556674 PIK3C2AO00443 1686 aa22.55■■□□□ 1.2
TGFB3-206ENST00000556674 CD163L1Q9NR16 1453 aa22.54■■□□□ 1.2
TGFB3-206ENST00000556674 SLIT3O75094 1523 aa22.54■■□□□ 1.2
TGFB3-206ENST00000556674 NBPF14Q5TI25 921 aa22.54■■□□□ 1.2
TGFB3-206ENST00000556674 SLC12A5Q9H2X9 1139 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms