RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 TSPY26PQ9H489 355 aa18.24■□□□□ 0.51
ARHGEF40-207ENST00000556399 KDM2BQ8NHM5 1336 aa18.24■□□□□ 0.51
ARHGEF40-207ENST00000556399 H3BQV1 296 aa18.24■□□□□ 0.51
ARHGEF40-207ENST00000556399 IFFO2Q5TF58 517 aa18.24■□□□□ 0.51
ARHGEF40-207ENST00000556399 TPM4P67936 248 aa18.23■□□□□ 0.51
ARHGEF40-207ENST00000556399 ERC2O15083 957 aa18.23■□□□□ 0.51
ARHGEF40-207ENST00000556399 FCHSD2O94868 740 aa18.23■□□□□ 0.51
ARHGEF40-207ENST00000556399 GOLGA6L19H0YKK7 550 aa18.23■□□□□ 0.51
ARHGEF40-207ENST00000556399 GCC2Q8IWJ2 1684 aa18.22■□□□□ 0.51
ARHGEF40-207ENST00000556399 FAM135AQ9P2D6 1515 aa18.22■□□□□ 0.51
ARHGEF40-207ENST00000556399 SEC24BO95487 1268 aa18.22■□□□□ 0.51
ARHGEF40-207ENST00000556399 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
ARHGEF40-207ENST00000556399 ZSCAN30Q86W11 494 aa18.22■□□□□ 0.51
ARHGEF40-207ENST00000556399 NUP160Q12769 1436 aa18.21■□□□□ 0.51
ARHGEF40-207ENST00000556399 MTERF4Q7Z6M4 381 aaKnown RBP18.21■□□□□ 0.51
ARHGEF40-207ENST00000556399 XRCC6P12956 609 aaKnown RBP eCLIP18.21■□□□□ 0.51
ARHGEF40-207ENST00000556399 RPGRIP1LQ68CZ1 1315 aa18.21■□□□□ 0.5
ARHGEF40-207ENST00000556399 ALDH1L2Q3SY69 923 aa18.2■□□□□ 0.5
ARHGEF40-207ENST00000556399 FAM184AQ8NB25 1140 aa18.2■□□□□ 0.5
ARHGEF40-207ENST00000556399 BECN2A8MW95 431 aa18.2■□□□□ 0.5
ARHGEF40-207ENST00000556399 KIF3AQ9Y496 699 aa18.2■□□□□ 0.5
ARHGEF40-207ENST00000556399 SSFA2P28290 1259 aa18.2■□□□□ 0.5
ARHGEF40-207ENST00000556399 THUMPD2Q9BTF0 503 aaKnown RBP18.2■□□□□ 0.5
ARHGEF40-207ENST00000556399 IFIT2P09913 472 aaKnown RBP18.19■□□□□ 0.5
ARHGEF40-207ENST00000556399 MAGI3Q5TCQ9 1506 aa18.19■□□□□ 0.5
ARHGEF40-207ENST00000556399 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
ARHGEF40-207ENST00000556399 ABCC11Q96J66 1382 aa18.19■□□□□ 0.5
ARHGEF40-207ENST00000556399 COL17A1Q9UMD9 1497 aaPredicted RBP18.19■□□□□ 0.5
ARHGEF40-207ENST00000556399 PKNOX2Q96KN3 472 aa18.19■□□□□ 0.5
ARHGEF40-207ENST00000556399 ZNF592Q92610 1267 aa18.19■□□□□ 0.5
ARHGEF40-207ENST00000556399 C9orf78Q9NZ63 289 aaPredicted RBP18.19■□□□□ 0.5
ARHGEF40-207ENST00000556399 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
ARHGEF40-207ENST00000556399 GNAI3P08754 354 aa18.18■□□□□ 0.5
ARHGEF40-207ENST00000556399 UBTFL1P0CB47 393 aaPredicted RBP18.18■□□□□ 0.5
ARHGEF40-207ENST00000556399 NFE2L2Q16236 605 aa18.18■□□□□ 0.5
ARHGEF40-207ENST00000556399 SAMD9Q5K651 1589 aa18.18■□□□□ 0.5
ARHGEF40-207ENST00000556399 TNNQ9UQP3 1299 aa18.18■□□□□ 0.5
ARHGEF40-207ENST00000556399 EID1Q9Y6B2 187 aa18.18■□□□□ 0.5
ARHGEF40-207ENST00000556399 ATAD2Q6PL18 1390 aa18.18■□□□□ 0.5
ARHGEF40-207ENST00000556399 CCDC27Q2M243 656 aa18.18■□□□□ 0.5
ARHGEF40-207ENST00000556399 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.18■□□□□ 0.5
ARHGEF40-207ENST00000556399 SF3A1Q15459 793 aaKnown RBP18.17■□□□□ 0.5
ARHGEF40-207ENST00000556399 PANK2Q9BZ23 570 aa18.17■□□□□ 0.5
ARHGEF40-207ENST00000556399 ZMYM4Q5VZL5 1548 aa18.17■□□□□ 0.5
ARHGEF40-207ENST00000556399 BICD2Q8TD16 824 aa18.17■□□□□ 0.5
ARHGEF40-207ENST00000556399 GNAI2P04899 355 aa18.17■□□□□ 0.5
ARHGEF40-207ENST00000556399 TEFQ10587 303 aa18.17■□□□□ 0.5
ARHGEF40-207ENST00000556399 PIK3C2GO75747 1445 aa18.16■□□□□ 0.5
ARHGEF40-207ENST00000556399 RLBP1P12271 317 aa18.16■□□□□ 0.5
ARHGEF40-207ENST00000556399 HDAC1Q13547 482 aaPredicted RBP18.16■□□□□ 0.5
ARHGEF40-207ENST00000556399 ATP10BO94823 1461 aa18.16■□□□□ 0.5
ARHGEF40-207ENST00000556399 BMP2KLQ5H9B9 411 aa18.16■□□□□ 0.5
ARHGEF40-207ENST00000556399 KDM6BO15054 1643 aa18.16■□□□□ 0.5
ARHGEF40-207ENST00000556399 KIAA0556O60303 1618 aa18.16■□□□□ 0.5
ARHGEF40-207ENST00000556399 HSP90AB4PQ58FF6 505 aa18.15■□□□□ 0.5
ARHGEF40-207ENST00000556399 SULT6B1Q6IMI4 303 aa18.15■□□□□ 0.5
ARHGEF40-207ENST00000556399 LETM1O95202 739 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF40-207ENST00000556399 RPAP2Q8IXW5 612 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF40-207ENST00000556399 MPNDQ8N594 471 aa18.15■□□□□ 0.5
ARHGEF40-207ENST00000556399 GORABQ5T7V8 394 aa18.15■□□□□ 0.5
ARHGEF40-207ENST00000556399 BLMP54132 1417 aaPredicted RBP18.14■□□□□ 0.5
ARHGEF40-207ENST00000556399 UQCRHLA0A096LP55 91 aa18.14■□□□□ 0.49
ARHGEF40-207ENST00000556399 SURF6O75683 361 aaKnown RBP18.14■□□□□ 0.49
ARHGEF40-207ENST00000556399 UQCRHP07919 91 aa18.14■□□□□ 0.49
ARHGEF40-207ENST00000556399 TRHP20396 242 aaPredicted RBP18.14■□□□□ 0.49
ARHGEF40-207ENST00000556399 FIBPO43427 364 aa18.14■□□□□ 0.49
ARHGEF40-207ENST00000556399 TBC1D9Q6ZT07 1266 aa18.14■□□□□ 0.49
ARHGEF40-207ENST00000556399 RNF20Q5VTR2 975 aa18.14■□□□□ 0.49
ARHGEF40-207ENST00000556399 IFT57Q9NWB7 429 aa18.13■□□□□ 0.49
ARHGEF40-207ENST00000556399 SYCE3A1L190 88 aa18.13■□□□□ 0.49
ARHGEF40-207ENST00000556399 CNTROBQ8N137 903 aa18.13■□□□□ 0.49
ARHGEF40-207ENST00000556399 CLCN1P35523 988 aa18.13■□□□□ 0.49
ARHGEF40-207ENST00000556399 LRRCC1Q9C099 1032 aa18.13■□□□□ 0.49
ARHGEF40-207ENST00000556399 CCDC9Q9Y3X0 531 aaKnown RBP18.13■□□□□ 0.49
ARHGEF40-207ENST00000556399 SASS6Q6UVJ0 657 aa18.13■□□□□ 0.49
ARHGEF40-207ENST00000556399 EIF2AK4Q9P2K8 1649 aaKnown RBP18.13■□□□□ 0.49
ARHGEF40-207ENST00000556399 SHANK2Q9UPX8 1470 aa18.13■□□□□ 0.49
ARHGEF40-207ENST00000556399 KIF21AQ7Z4S6 1674 aa18.13■□□□□ 0.49
ARHGEF40-207ENST00000556399 CCT4P50991 539 aaKnown RBP18.12■□□□□ 0.49
ARHGEF40-207ENST00000556399 CCDC30Q5VVM6 783 aa18.12■□□□□ 0.49
ARHGEF40-207ENST00000556399 WDR33Q9C0J8 1336 aaKnown RBP18.12■□□□□ 0.49
ARHGEF40-207ENST00000556399 ADGRL2O95490 1459 aa18.12■□□□□ 0.49
ARHGEF40-207ENST00000556399 HMGN5P82970 282 aaKnown RBP18.12■□□□□ 0.49
ARHGEF40-207ENST00000556399 POLR3AO14802 1390 aaPredicted RBP18.11■□□□□ 0.49
ARHGEF40-207ENST00000556399 ZNF771Q7L3S4 317 aaPredicted RBP18.11■□□□□ 0.49
ARHGEF40-207ENST00000556399 NUCB1Q02818 461 aa18.11■□□□□ 0.49
ARHGEF40-207ENST00000556399 INSRP06213 1382 aa18.11■□□□□ 0.49
ARHGEF40-207ENST00000556399 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.11■□□□□ 0.49
ARHGEF40-207ENST00000556399 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
ARHGEF40-207ENST00000556399 SLC52A1Q9NWF4 448 aa18.11■□□□□ 0.49
ARHGEF40-207ENST00000556399 CSB-PGBD3P0DP91 1061 aa18.1■□□□□ 0.49
ARHGEF40-207ENST00000556399 NOS1P29475 1434 aa18.1■□□□□ 0.49
ARHGEF40-207ENST00000556399 RRS1Q15050 365 aaKnown RBP18.1■□□□□ 0.49
ARHGEF40-207ENST00000556399 SMARCA5O60264 1052 aaPredicted RBP18.1■□□□□ 0.49
ARHGEF40-207ENST00000556399 TPM3P06753 285 aa18.1■□□□□ 0.49
ARHGEF40-207ENST00000556399 G3BP1Q13283 466 aaKnown RBP eCLIP18.1■□□□□ 0.492e-6■□□□□ 10.4
ARHGEF40-207ENST00000556399 UBE2Q2Q8WVN8 375 aa18.1■□□□□ 0.49
ARHGEF40-207ENST00000556399 BAG4O95429 457 aaKnown RBP18.09■□□□□ 0.49
ARHGEF40-207ENST00000556399 C1orf141Q5JVX7 400 aa18.09■□□□□ 0.49
ARHGEF40-207ENST00000556399 ZNF330Q9Y3S2 320 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms