RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 MLECQ14165 292 aa8.2□□□□□ -1.1
ATXN3-239ENST00000556315 ZNF598Q86UK7 904 aaKnown RBP8.2□□□□□ -1.1
ATXN3-239ENST00000556315 DENND4BO75064 1496 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-239ENST00000556315 LIAT1Q6ZQX7 453 aa8.19□□□□□ -1.1
ATXN3-239ENST00000556315 SLC6A16Q9GZN6 736 aa8.19□□□□□ -1.1
ATXN3-239ENST00000556315 AKNAQ7Z591 1439 aa8.19□□□□□ -1.1
ATXN3-239ENST00000556315 PRR20EP86478 221 aa8.18□□□□□ -1.1
ATXN3-239ENST00000556315 PRR20CP86479 221 aa8.18□□□□□ -1.1
ATXN3-239ENST00000556315 PRR20DP86480 221 aa8.18□□□□□ -1.1
ATXN3-239ENST00000556315 PRR20BP86481 221 aa8.18□□□□□ -1.1
ATXN3-239ENST00000556315 PRR20AP86496 221 aa8.18□□□□□ -1.1
ATXN3-239ENST00000556315 PUS10Q3MIT2 529 aaKnown RBP8.18□□□□□ -1.1
ATXN3-239ENST00000556315 FHOD3Q2V2M9 1422 aa8.18□□□□□ -1.1
ATXN3-239ENST00000556315 MORN1Q5T089 497 aa8.17□□□□□ -1.1
ATXN3-239ENST00000556315 PHOX2BQ99453 314 aa8.17□□□□□ -1.1
ATXN3-239ENST00000556315 PRXQ9BXM0 1461 aa8.17□□□□□ -1.1
ATXN3-239ENST00000556315 BCORL1Q5H9F3 1711 aa8.16□□□□□ -1.1
ATXN3-239ENST00000556315 PLA2G2CQ5R387 149 aa8.16□□□□□ -1.1
ATXN3-239ENST00000556315 ABCA9Q8IUA7 1624 aa8.16□□□□□ -1.1
ATXN3-239ENST00000556315 MADDQ8WXG6 1647 aa8.16□□□□□ -1.1
ATXN3-239ENST00000556315 SPSB2Q99619 263 aa8.16□□□□□ -1.1
ATXN3-239ENST00000556315 YEATS2Q9ULM3 1422 aa8.16□□□□□ -1.1
ATXN3-239ENST00000556315 FANCAO15360 1455 aa8.15□□□□□ -1.1
ATXN3-239ENST00000556315 CEBPAP49715 358 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-239ENST00000556315 RDH13Q8NBN7 331 aa8.15□□□□□ -1.1
ATXN3-239ENST00000556315 NLRP7Q8WX94 980 aa8.15□□□□□ -1.1
ATXN3-239ENST00000556315 THAP11Q96EK4 314 aa8.15□□□□□ -1.1
ATXN3-239ENST00000556315 MAGI2Q86UL8 1455 aa8.14□□□□□ -1.11
ATXN3-239ENST00000556315 DDX11L8A8MPP1 907 aa8.14□□□□□ -1.11
ATXN3-239ENST00000556315 GDF9O60383 454 aa8.14□□□□□ -1.11
ATXN3-239ENST00000556315 ATP6V1AP38606 617 aa8.14□□□□□ -1.11
ATXN3-239ENST00000556315 GCGRP47871 477 aa8.14□□□□□ -1.11
ATXN3-239ENST00000556315 FUT2Q10981 343 aa8.14□□□□□ -1.11
ATXN3-239ENST00000556315 ZNF697Q5TEC3 545 aa8.14□□□□□ -1.11
ATXN3-239ENST00000556315 GPIHBP1Q8IV16 184 aa8.14□□□□□ -1.11
ATXN3-239ENST00000556315 SULF1Q8IWU6 871 aa8.14□□□□□ -1.11
ATXN3-239ENST00000556315 DGAT1O75907 488 aa8.12□□□□□ -1.11
ATXN3-239ENST00000556315 EFCAB2Q5VUJ9 269 aa8.12□□□□□ -1.11
ATXN3-239ENST00000556315 SALL2Q9Y467 1007 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-239ENST00000556315 FRMPD1Q5SYB0 1578 aa8.12□□□□□ -1.11
ATXN3-239ENST00000556315 SCAPERQ9BY12 1400 aa8.12□□□□□ -1.11
ATXN3-239ENST00000556315 RANGAP1P46060 587 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-239ENST00000556315 SLC27A5Q9Y2P5 690 aa8.11□□□□□ -1.11
ATXN3-239ENST00000556315 ARHGEF40Q8TER5 1519 aa8.11□□□□□ -1.11
ATXN3-239ENST00000556315 ATP10AO60312 1499 aa8.11□□□□□ -1.11
ATXN3-239ENST00000556315 NUP153P49790 1475 aaKnown RBP8.11□□□□□ -1.11
ATXN3-239ENST00000556315 MYT1Q01538 1121 aa8.1□□□□□ -1.11
ATXN3-239ENST00000556315 TPRNQ4KMQ1 711 aa8.1□□□□□ -1.11
ATXN3-239ENST00000556315 ZNF787Q6DD87 383 aa8.1□□□□□ -1.11
ATXN3-239ENST00000556315 FAM160A2Q8N612 972 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-239ENST00000556315 RIMS1Q86UR5 1692 aaKnown RBP8.1□□□□□ -1.11
ATXN3-239ENST00000556315 PTPRTO14522 1441 aa8.1□□□□□ -1.11
ATXN3-239ENST00000556315 ZFYVE16Q7Z3T8 1539 aa8.09□□□□□ -1.11
ATXN3-239ENST00000556315 FMNL1O95466 1100 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-239ENST00000556315 RPIAP49247 311 aa8.09□□□□□ -1.11
ATXN3-239ENST00000556315 PKDCCQ504Y2 493 aa8.09□□□□□ -1.11
ATXN3-239ENST00000556315 LMOD2Q6P5Q4 547 aa8.09□□□□□ -1.11
ATXN3-239ENST00000556315 BRICD5Q6PL45 260 aa8.09□□□□□ -1.11
ATXN3-239ENST00000556315 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATXN3-239ENST00000556315 ESF1Q9H501 851 aaKnown RBP8.09□□□□□ -1.11
ATXN3-239ENST00000556315 PLCH2O75038 1416 aa8.09□□□□□ -1.11
ATXN3-239ENST00000556315 UHRF1BP1Q6BDS2 1440 aa8.09□□□□□ -1.11
ATXN3-239ENST00000556315 EFCAB5A4FU69 1503 aa8.08□□□□□ -1.12
ATXN3-239ENST00000556315 AFAP1Q8N556 730 aa8.08□□□□□ -1.12
ATXN3-239ENST00000556315 PKD2L1Q9P0L9 805 aa8.08□□□□□ -1.12
ATXN3-239ENST00000556315 ZMYM4Q5VZL5 1548 aa8.08□□□□□ -1.12
ATXN3-239ENST00000556315 CTTNBP2Q8WZ74 1663 aa8.08□□□□□ -1.12
ATXN3-239ENST00000556315 C9orf84Q5VXU9 1444 aa8.07□□□□□ -1.12
ATXN3-239ENST00000556315 TNFRSF10AO00220 468 aa8.07□□□□□ -1.12
ATXN3-239ENST00000556315 MAP2K5Q13163 448 aa8.07□□□□□ -1.12
ATXN3-239ENST00000556315 CDK11AQ9UQ88 783 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-239ENST00000556315 FCF1Q9Y324 198 aaKnown RBP8.07□□□□□ -1.12
ATXN3-239ENST00000556315 ARHGEF12Q9NZN5 1544 aa8.07□□□□□ -1.12
ATXN3-239ENST00000556315 RAPGEF6Q8TEU7 1601 aa8.07□□□□□ -1.12
ATXN3-239ENST00000556315 CD46P15529 392 aa8.06□□□□□ -1.12
ATXN3-239ENST00000556315 MSS51Q4VC12 460 aa8.06□□□□□ -1.12
ATXN3-239ENST00000556315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.06□□□□□ -1.12
ATXN3-239ENST00000556315 FAM187AA6NFU0 413 aa8.05□□□□□ -1.12
ATXN3-239ENST00000556315 UBAP1LF5GYI3 381 aa8.05□□□□□ -1.12
ATXN3-239ENST00000556315 IRF6O14896 467 aa8.05□□□□□ -1.12
ATXN3-239ENST00000556315 GRIPAP1Q4V328 841 aa8.05□□□□□ -1.12
ATXN3-239ENST00000556315 ATP1B4Q9UN42 357 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-239ENST00000556315 TTC37Q6PGP7 1564 aa8.05□□□□□ -1.12
ATXN3-239ENST00000556315 TRAPPC8Q9Y2L5 1435 aa8.04□□□□□ -1.12
ATXN3-239ENST00000556315 HECW1Q76N89 1606 aa8.04□□□□□ -1.12
ATXN3-239ENST00000556315 RNF19BQ6ZMZ0 732 aa8.04□□□□□ -1.12
ATXN3-239ENST00000556315 PRDM9Q9NQV7 894 aa8.04□□□□□ -1.12
ATXN3-239ENST00000556315 IQSEC2Q5JU85 1478 aa8.04□□□□□ -1.12
ATXN3-239ENST00000556315 SAMD9Q5K651 1589 aa8.04□□□□□ -1.12
ATXN3-239ENST00000556315 MINK1Q8N4C8 1332 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-239ENST00000556315 RICTORQ6R327 1708 aa8.03□□□□□ -1.12
ATXN3-239ENST00000556315 CFAP74Q9C0B2 1584 aa8.03□□□□□ -1.12
ATXN3-239ENST00000556315 CD2BP2O95400 341 aaKnown RBP8.03□□□□□ -1.12
ATXN3-239ENST00000556315 PRKCSHP14314 528 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-239ENST00000556315 SPATA31D1Q6ZQQ2 1576 aa8.02□□□□□ -1.13
ATXN3-239ENST00000556315 ZNF775Q96BV0 537 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-239ENST00000556315 LTBP4Q8N2S1 1624 aa8.01□□□□□ -1.13
ATXN3-239ENST00000556315 MMP16P51512 607 aa8.01□□□□□ -1.13
ATXN3-239ENST00000556315 FOXC1Q12948 553 aa8.01□□□□□ -1.13
ATXN3-239ENST00000556315 Q3C1V9 767 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms