RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 ACEP12821 1306 aa18.03■□□□□ 0.48
SNX6-207ENST00000556303 FAM83GA6ND36 823 aa18.03■□□□□ 0.48
SNX6-207ENST00000556303 SRPK2P78362 688 aaKnown RBP18.03■□□□□ 0.48
SNX6-207ENST00000556303 NWD2Q9ULI1 1742 aa18.02■□□□□ 0.48
SNX6-207ENST00000556303 TRPM1Q7Z4N2 1603 aa18.01■□□□□ 0.47
SNX6-207ENST00000556303 EVC2Q86UK5 1308 aa18.01■□□□□ 0.47
SNX6-207ENST00000556303 ONECUT3O60422 494 aaPredicted RBP18.01■□□□□ 0.47
SNX6-207ENST00000556303 TOPAZ1Q8N9V7 1692 aa18.01■□□□□ 0.47
SNX6-207ENST00000556303 RALGAPBQ86X10 1494 aa18.01■□□□□ 0.47
SNX6-207ENST00000556303 ABCA3Q99758 1704 aa18.01■□□□□ 0.47
SNX6-207ENST00000556303 CCDC125Q86Z20 511 aa18■□□□□ 0.47
SNX6-207ENST00000556303 CABP2Q9NPB3 220 aa17.99■□□□□ 0.47
SNX6-207ENST00000556303 PPIP5K1Q6PFW1 1433 aa17.98■□□□□ 0.47
SNX6-207ENST00000556303 QRICH2Q9H0J4 1663 aa17.97■□□□□ 0.47
SNX6-207ENST00000556303 TONSLQ96HA7 1378 aa17.97■□□□□ 0.47
SNX6-207ENST00000556303 PLEKHG5O94827 1062 aa17.97■□□□□ 0.47
SNX6-207ENST00000556303 BTG4Q9NY30 223 aa17.97■□□□□ 0.47
SNX6-207ENST00000556303 ABTB2Q8N961 1025 aa17.96■□□□□ 0.47
SNX6-207ENST00000556303 COL14A1Q05707 1796 aaKnown RBP17.96■□□□□ 0.47
SNX6-207ENST00000556303 PLCH1Q4KWH8 1693 aa17.96■□□□□ 0.47
SNX6-207ENST00000556303 GLI3P10071 1580 aa17.96■□□□□ 0.46
SNX6-207ENST00000556303 SBNO2Q9Y2G9 1366 aa17.95■□□□□ 0.46
SNX6-207ENST00000556303 NLRP13Q86W25 1043 aa17.95■□□□□ 0.46
SNX6-207ENST00000556303 ZNF692Q9BU19 519 aaPredicted RBP17.95■□□□□ 0.46
SNX6-207ENST00000556303 PRDM11Q9NQV5 511 aa17.95■□□□□ 0.46
SNX6-207ENST00000556303 CABP1Q9NZU7 370 aa17.95■□□□□ 0.46
SNX6-207ENST00000556303 CCDC9Q9Y3X0 531 aaKnown RBP17.94■□□□□ 0.46
SNX6-207ENST00000556303 CRYBG1Q9Y4K1 1723 aa17.93■□□□□ 0.46
SNX6-207ENST00000556303 SEPT12Q8IYM1 358 aa17.93■□□□□ 0.46
SNX6-207ENST00000556303 CARD11Q9BXL7 1154 aa17.93■□□□□ 0.46
SNX6-207ENST00000556303 USP19O94966 1318 aa17.93■□□□□ 0.46
SNX6-207ENST00000556303 KIAA0232Q92628 1395 aa17.91■□□□□ 0.46
SNX6-207ENST00000556303 SLC24A1O60721 1099 aa17.91■□□□□ 0.46
SNX6-207ENST00000556303 CPDO75976 1380 aa17.91■□□□□ 0.46
SNX6-207ENST00000556303 USP6P35125 1406 aa17.9■□□□□ 0.46
SNX6-207ENST00000556303 NRAPQ86VF7 1730 aa17.9■□□□□ 0.46
SNX6-207ENST00000556303 SPATA31A5Q5VU36 1347 aa17.9■□□□□ 0.46
SNX6-207ENST00000556303 SPATA31A7Q8IWB4 1347 aa17.9■□□□□ 0.46
SNX6-207ENST00000556303 NUTM2GQ5VZR2 741 aa17.89■□□□□ 0.45
SNX6-207ENST00000556303 PUS7Q96PZ0 661 aaKnown RBP17.89■□□□□ 0.45
SNX6-207ENST00000556303 GCP02774 474 aa17.88■□□□□ 0.45
SNX6-207ENST00000556303 ZC3H6P61129 1189 aaKnown RBP17.88■□□□□ 0.45
SNX6-207ENST00000556303 KRT27Q7Z3Y8 459 aa17.88■□□□□ 0.45
SNX6-207ENST00000556303 SSH2Q76I76 1423 aa17.88■□□□□ 0.45
SNX6-207ENST00000556303 PHRF1Q9P1Y6 1649 aaKnown RBP17.87■□□□□ 0.45
SNX6-207ENST00000556303 NLRP6P59044 892 aa17.86■□□□□ 0.45
SNX6-207ENST00000556303 FAM98CQ17RN3 349 aaKnown RBP17.86■□□□□ 0.45
SNX6-207ENST00000556303 BLMP54132 1417 aaPredicted RBP17.85■□□□□ 0.45
SNX6-207ENST00000556303 CHRNA2Q15822 529 aa17.85■□□□□ 0.45
SNX6-207ENST00000556303 SPATA31A1Q5TZJ5 1347 aa17.85■□□□□ 0.45
SNX6-207ENST00000556303 SRCAPQ6ZRS2 3230 aa17.85■□□□□ 0.45
SNX6-207ENST00000556303 TTC21AQ8NDW8 1320 aa17.85■□□□□ 0.45
SNX6-207ENST00000556303 TIMELESSQ9UNS1 1208 aa17.85■□□□□ 0.45
SNX6-207ENST00000556303 CPSF1Q10570 1443 aaKnown RBP17.84■□□□□ 0.45
SNX6-207ENST00000556303 CLSPNQ9HAW4 1339 aa17.84■□□□□ 0.45
SNX6-207ENST00000556303 EVA1CP58658 441 aa17.84■□□□□ 0.45
SNX6-207ENST00000556303 BRWD3Q6RI45 1802 aa17.84■□□□□ 0.45
SNX6-207ENST00000556303 NRKQ7Z2Y5 1582 aa17.83■□□□□ 0.45
SNX6-207ENST00000556303 TTC21BQ7Z4L5 1316 aa17.83■□□□□ 0.44
SNX6-207ENST00000556303 KCNH5Q8NCM2 988 aa17.83■□□□□ 0.44
SNX6-207ENST00000556303 A0A0G2JS52 829 aa17.82■□□□□ 0.44
SNX6-207ENST00000556303 MYT1Q01538 1121 aa17.82■□□□□ 0.44
SNX6-207ENST00000556303 SF3B2Q13435 895 aaKnown RBP17.82■□□□□ 0.44
SNX6-207ENST00000556303 BARGINQ6ZT62 677 aa17.82■□□□□ 0.44
SNX6-207ENST00000556303 THRAP3Q9Y2W1 955 aaKnown RBP17.82■□□□□ 0.44
SNX6-207ENST00000556303 STRN4Q9NRL3 753 aa17.81■□□□□ 0.44
SNX6-207ENST00000556303 SLIT3O75094 1523 aa17.81■□□□□ 0.44
SNX6-207ENST00000556303 AATKQ6ZMQ8 1374 aa17.8■□□□□ 0.44
SNX6-207ENST00000556303 KTN1Q86UP2 1357 aaKnown RBP17.8■□□□□ 0.44
SNX6-207ENST00000556303 AKAP12Q02952 1782 aa17.79■□□□□ 0.44
SNX6-207ENST00000556303 CAMTA1Q9Y6Y1 1673 aa17.79■□□□□ 0.44
SNX6-207ENST00000556303 LMO7Q8WWI1 1683 aa17.78■□□□□ 0.44
SNX6-207ENST00000556303 HDGFL2Q7Z4V5 671 aaPredicted RBP17.78■□□□□ 0.44
SNX6-207ENST00000556303 TCP11L2Q8N4U5 519 aa17.78■□□□□ 0.44
SNX6-207ENST00000556303 NINLQ9Y2I6 1382 aa17.78■□□□□ 0.44
SNX6-207ENST00000556303 THSD7AQ9UPZ6 1657 aa17.77■□□□□ 0.44
SNX6-207ENST00000556303 ST20-MTHFSA0A0A6YYL1 179 aa17.77■□□□□ 0.44
SNX6-207ENST00000556303 LARP1Q6PKG0 1096 aaKnown RBP17.77■□□□□ 0.44
SNX6-207ENST00000556303 TESK2Q96S53 571 aa17.77■□□□□ 0.44
SNX6-207ENST00000556303 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.44
SNX6-207ENST00000556303 PIK3C2AO00443 1686 aa17.77■□□□□ 0.43
SNX6-207ENST00000556303 ARHGEF25Q86VW2 580 aa17.76■□□□□ 0.43
SNX6-207ENST00000556303 TERF2IPQ9NYB0 399 aa17.76■□□□□ 0.43
SNX6-207ENST00000556303 USP31Q70CQ4 1352 aa17.76■□□□□ 0.43
SNX6-207ENST00000556303 COL5A2P05997 1499 aaPredicted RBP17.75■□□□□ 0.43
SNX6-207ENST00000556303 TMC1Q8TDI8 760 aa17.75■□□□□ 0.43
SNX6-207ENST00000556303 C11orf95C9JLR9 678 aaPredicted RBP17.74■□□□□ 0.43
SNX6-207ENST00000556303 FAM196AQ6ZSG2 479 aa17.74■□□□□ 0.43
SNX6-207ENST00000556303 SLC12A5Q9H2X9 1139 aa17.74■□□□□ 0.43
SNX6-207ENST00000556303 USP35Q9P2H5 1018 aa17.74■□□□□ 0.43
SNX6-207ENST00000556303 CD163L1Q9NR16 1453 aa17.74■□□□□ 0.43
SNX6-207ENST00000556303 CRB1P82279 1406 aa17.73■□□□□ 0.43
SNX6-207ENST00000556303 BAG6P46379 1132 aa17.73■□□□□ 0.43
SNX6-207ENST00000556303 EDC4Q6P2E9 1401 aaKnown RBP17.72■□□□□ 0.43
SNX6-207ENST00000556303 MON2Q7Z3U7 1717 aa17.72■□□□□ 0.43
SNX6-207ENST00000556303 PDE3BQ13370 1112 aa17.72■□□□□ 0.43
SNX6-207ENST00000556303 ABCC6O95255 1503 aa17.71■□□□□ 0.43
SNX6-207ENST00000556303 WDR17Q8IZU2 1322 aa17.71■□□□□ 0.42
SNX6-207ENST00000556303 TMF1P82094 1093 aa17.7■□□□□ 0.42
SNX6-207ENST00000556303 CDCA8Q53HL2 280 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms