RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 GPRASP1Q5JY77 1395 aa21.13■□□□□ 0.97
CHMP4BP1-201ENST00000556017 HRCP23327 699 aa21.13■□□□□ 0.97
CHMP4BP1-201ENST00000556017 KRT27Q7Z3Y8 459 aa21.13■□□□□ 0.97
CHMP4BP1-201ENST00000556017 BTG4Q9NY30 223 aa21.13■□□□□ 0.97
CHMP4BP1-201ENST00000556017 EIF3AQ14152 1382 aaKnown RBP21.12■□□□□ 0.97
CHMP4BP1-201ENST00000556017 STAC3Q96MF2 364 aa21.12■□□□□ 0.97
CHMP4BP1-201ENST00000556017 KIAA1210Q9ULL0 1709 aa21.11■□□□□ 0.97
CHMP4BP1-201ENST00000556017 FAM98CQ17RN3 349 aaKnown RBP21.1■□□□□ 0.97
CHMP4BP1-201ENST00000556017 CCDC9Q9Y3X0 531 aaKnown RBP21.1■□□□□ 0.97
CHMP4BP1-201ENST00000556017 NUDT16Q96DE0 195 aaKnown RBP21.09■□□□□ 0.97
CHMP4BP1-201ENST00000556017 SPATA31A5Q5VU36 1347 aa21.08■□□□□ 0.97
CHMP4BP1-201ENST00000556017 SPATA31A7Q8IWB4 1347 aa21.08■□□□□ 0.97
CHMP4BP1-201ENST00000556017 TNS1Q9HBL0 1735 aaKnown RBP21.08■□□□□ 0.97
CHMP4BP1-201ENST00000556017 NGDNQ8NEJ9 315 aaKnown RBP21.07■□□□□ 0.96
CHMP4BP1-201ENST00000556017 POLR3AO14802 1390 aaPredicted RBP21.07■□□□□ 0.96
CHMP4BP1-201ENST00000556017 LRP5O75197 1615 aa21.06■□□□□ 0.96
CHMP4BP1-201ENST00000556017 RGPD1P0DJD0 1748 aa21.06■□□□□ 0.96
CHMP4BP1-201ENST00000556017 FAM182BQ5T319 152 aa21.05■□□□□ 0.96
CHMP4BP1-201ENST00000556017 CDK19Q9BWU1 502 aa21.04■□□□□ 0.96
CHMP4BP1-201ENST00000556017 KIAA0232Q92628 1395 aa21.04■□□□□ 0.96
CHMP4BP1-201ENST00000556017 NRKQ7Z2Y5 1582 aa21.03■□□□□ 0.96
CHMP4BP1-201ENST00000556017 PAK3O75914 559 aaPredicted RBP21.03■□□□□ 0.96
CHMP4BP1-201ENST00000556017 NBPF1Q3BBV0 1214 aa21.02■□□□□ 0.96
CHMP4BP1-201ENST00000556017 PRDM11Q9NQV5 511 aa21.02■□□□□ 0.96
CHMP4BP1-201ENST00000556017 LMO7Q8WWI1 1683 aa21.02■□□□□ 0.95
CHMP4BP1-201ENST00000556017 SF3B2Q13435 895 aaKnown RBP21.01■□□□□ 0.95
CHMP4BP1-201ENST00000556017 CHRNA2Q15822 529 aa21.01■□□□□ 0.95
CHMP4BP1-201ENST00000556017 ACEP12821 1306 aa21.01■□□□□ 0.95
CHMP4BP1-201ENST00000556017 SPATA31A1Q5TZJ5 1347 aa21.01■□□□□ 0.95
CHMP4BP1-201ENST00000556017 CAMTA1Q9Y6Y1 1673 aa21■□□□□ 0.95
CHMP4BP1-201ENST00000556017 PLEKHG3A1L390 1219 aa21■□□□□ 0.95
CHMP4BP1-201ENST00000556017 NBPF8Q3BBV2 869 aa21■□□□□ 0.95
CHMP4BP1-201ENST00000556017 DISP2A7MBM2 1401 aa21■□□□□ 0.95
CHMP4BP1-201ENST00000556017 NUTM2GQ5VZR2 741 aa20.99■□□□□ 0.95
CHMP4BP1-201ENST00000556017 A0A0G2JS52 829 aa20.98■□□□□ 0.95
CHMP4BP1-201ENST00000556017 MYT1Q01538 1121 aa20.98■□□□□ 0.95
CHMP4BP1-201ENST00000556017 ZC3H6P61129 1189 aaKnown RBP20.97■□□□□ 0.95
CHMP4BP1-201ENST00000556017 EN1Q05925 392 aaPredicted RBP20.97■□□□□ 0.95
CHMP4BP1-201ENST00000556017 CCDC61Q9Y6R9 512 aa20.97■□□□□ 0.95
CHMP4BP1-201ENST00000556017 BAG6P46379 1132 aa20.96■□□□□ 0.95
CHMP4BP1-201ENST00000556017 USP19O94966 1318 aa20.96■□□□□ 0.95
CHMP4BP1-201ENST00000556017 PSDA5PKW4 1024 aaPredicted RBP20.95■□□□□ 0.94
CHMP4BP1-201ENST00000556017 SSH2Q76I76 1423 aa20.95■□□□□ 0.94
CHMP4BP1-201ENST00000556017 QRICH2Q9H0J4 1663 aa20.94■□□□□ 0.94
CHMP4BP1-201ENST00000556017 CPDO75976 1380 aa20.94■□□□□ 0.94
CHMP4BP1-201ENST00000556017 STRN4Q9NRL3 753 aa20.92■□□□□ 0.94
CHMP4BP1-201ENST00000556017 PPIP5K1Q6PFW1 1433 aa20.91■□□□□ 0.94
CHMP4BP1-201ENST00000556017 RREB1Q92766 1687 aa20.91■□□□□ 0.94
CHMP4BP1-201ENST00000556017 EZH2Q15910 746 aaKnown RBP20.9■□□□□ 0.94
CHMP4BP1-201ENST00000556017 LARP1Q6PKG0 1096 aaKnown RBP20.9■□□□□ 0.94
CHMP4BP1-201ENST00000556017 CAMKK2Q96RR4 588 aa20.9■□□□□ 0.94
CHMP4BP1-201ENST00000556017 BARGINQ6ZT62 677 aa20.89■□□□□ 0.93
CHMP4BP1-201ENST00000556017 ABTB2Q8N961 1025 aa20.89■□□□□ 0.93
CHMP4BP1-201ENST00000556017 COL18A1P39060 1754 aa20.89■□□□□ 0.93
CHMP4BP1-201ENST00000556017 PARP4Q9UKK3 1724 aaKnown RBP20.89■□□□□ 0.93
CHMP4BP1-201ENST00000556017 CENPJQ9HC77 1338 aaPredicted RBP20.88■□□□□ 0.93
CHMP4BP1-201ENST00000556017 CABP2Q9NPB3 220 aa20.88■□□□□ 0.93
CHMP4BP1-201ENST00000556017 NUP188Q5SRE5 1749 aa20.87■□□□□ 0.93
CHMP4BP1-201ENST00000556017 PIK3C2AO00443 1686 aa20.87■□□□□ 0.93
CHMP4BP1-201ENST00000556017 TRPM1Q7Z4N2 1603 aa20.87■□□□□ 0.93
CHMP4BP1-201ENST00000556017 TRIM37O94972 964 aa20.87■□□□□ 0.93
CHMP4BP1-201ENST00000556017 SLIT3O75094 1523 aa20.87■□□□□ 0.93
CHMP4BP1-201ENST00000556017 COL5A2P05997 1499 aaPredicted RBP20.87■□□□□ 0.93
CHMP4BP1-201ENST00000556017 PEAK1Q9H792 1746 aa20.87■□□□□ 0.93
CHMP4BP1-201ENST00000556017 GCP02774 474 aa20.86■□□□□ 0.93
CHMP4BP1-201ENST00000556017 FAM196AQ6ZSG2 479 aa20.86■□□□□ 0.93
CHMP4BP1-201ENST00000556017 USP35Q9P2H5 1018 aa20.86■□□□□ 0.93
CHMP4BP1-201ENST00000556017 USP6P35125 1406 aa20.86■□□□□ 0.93
CHMP4BP1-201ENST00000556017 R3HDM1Q15032 1099 aaKnown RBP20.85■□□□□ 0.93
CHMP4BP1-201ENST00000556017 SRPK2P78362 688 aaKnown RBP20.84■□□□□ 0.93
CHMP4BP1-201ENST00000556017 L3MBTL2Q969R5 705 aa20.84■□□□□ 0.93
CHMP4BP1-201ENST00000556017 BRD4O60885 1362 aaPredicted RBP20.83■□□□□ 0.92
CHMP4BP1-201ENST00000556017 SBF2Q86WG5 1849 aa20.83■□□□□ 0.92
CHMP4BP1-201ENST00000556017 NLRP13Q86W25 1043 aa20.82■□□□□ 0.92
CHMP4BP1-201ENST00000556017 TCP11L2Q8N4U5 519 aa20.82■□□□□ 0.92
CHMP4BP1-201ENST00000556017 CABP1Q9NZU7 370 aa20.82■□□□□ 0.92
CHMP4BP1-201ENST00000556017 AKAP12Q02952 1782 aa20.82■□□□□ 0.92
CHMP4BP1-201ENST00000556017 EVA1CP58658 441 aa20.81■□□□□ 0.92
CHMP4BP1-201ENST00000556017 RGPD5Q99666 1765 aa20.81■□□□□ 0.92
CHMP4BP1-201ENST00000556017 LRRC37A3O60309 1634 aa20.81■□□□□ 0.92
CHMP4BP1-201ENST00000556017 WNK3Q9BYP7 1800 aa20.81■□□□□ 0.92
CHMP4BP1-201ENST00000556017 PARD3Q8TEW0 1356 aa20.8■□□□□ 0.92
CHMP4BP1-201ENST00000556017 APBA3O96018 575 aa20.79■□□□□ 0.92
CHMP4BP1-201ENST00000556017 CRB1P82279 1406 aa20.78■□□□□ 0.92
CHMP4BP1-201ENST00000556017 AATKQ6ZMQ8 1374 aa20.78■□□□□ 0.92
CHMP4BP1-201ENST00000556017 THRAP3Q9Y2W1 955 aaKnown RBP20.78■□□□□ 0.92
CHMP4BP1-201ENST00000556017 PDE3BQ13370 1112 aa20.77■□□□□ 0.92
CHMP4BP1-201ENST00000556017 SIN3AQ96ST3 1273 aa20.77■□□□□ 0.92
CHMP4BP1-201ENST00000556017 AXIN2Q9Y2T1 843 aa20.76■□□□□ 0.91
CHMP4BP1-201ENST00000556017 NLRP6P59044 892 aa20.75■□□□□ 0.91
CHMP4BP1-201ENST00000556017 RGPD3A6NKT7 1758 aaPredicted RBP20.74■□□□□ 0.91
CHMP4BP1-201ENST00000556017 RGPD4Q7Z3J3 1758 aa20.74■□□□□ 0.91
CHMP4BP1-201ENST00000556017 CPSF1Q10570 1443 aaKnown RBP20.73■□□□□ 0.91
CHMP4BP1-201ENST00000556017 NFAT5O94916 1531 aa20.73■□□□□ 0.91
CHMP4BP1-201ENST00000556017 PTF1AQ7RTS3 328 aa20.72■□□□□ 0.91
CHMP4BP1-201ENST00000556017 MON2Q7Z3U7 1717 aa20.72■□□□□ 0.91
CHMP4BP1-201ENST00000556017 TTC21BQ7Z4L5 1316 aa20.71■□□□□ 0.91
CHMP4BP1-201ENST00000556017 EVC2Q86UK5 1308 aa20.71■□□□□ 0.91
CHMP4BP1-201ENST00000556017 OVOS2A0A0G2JMS6 1433 aa20.7■□□□□ 0.9
CHMP4BP1-201ENST00000556017 OVOS2A0A0J9YW53 1432 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms