RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 GLI3P10071 1580 aa11.21□□□□□ -0.61
PTCSC3-201ENST00000556013 ATP7BP35670 1465 aa11.21□□□□□ -0.61
PTCSC3-201ENST00000556013 CENPJQ9HC77 1338 aaPredicted RBP11.21□□□□□ -0.61
PTCSC3-201ENST00000556013 SF3B2Q13435 895 aaKnown RBP11.21□□□□□ -0.61
PTCSC3-201ENST00000556013 L3MBTL2Q969R5 705 aa11.21□□□□□ -0.61
PTCSC3-201ENST00000556013 SPATA31A5Q5VU36 1347 aa11.2□□□□□ -0.62
PTCSC3-201ENST00000556013 SPATA31A7Q8IWB4 1347 aa11.2□□□□□ -0.62
PTCSC3-201ENST00000556013 NLRP13Q86W25 1043 aa11.2□□□□□ -0.62
PTCSC3-201ENST00000556013 PRDM11Q9NQV5 511 aa11.2□□□□□ -0.62
PTCSC3-201ENST00000556013 TRPM3Q9HCF6 1732 aaPredicted RBP11.2□□□□□ -0.62
PTCSC3-201ENST00000556013 ABTB2Q8N961 1025 aa11.19□□□□□ -0.62
PTCSC3-201ENST00000556013 ALS2Q96Q42 1657 aa11.19□□□□□ -0.62
PTCSC3-201ENST00000556013 EP400Q96L91 3159 aa11.18□□□□□ -0.62
PTCSC3-201ENST00000556013 ARHGEF28Q8N1W1 1705 aaKnown RBP11.18□□□□□ -0.62
PTCSC3-201ENST00000556013 PLEKHG5O94827 1062 aa11.18□□□□□ -0.62
PTCSC3-201ENST00000556013 SRPK2P78362 688 aaKnown RBP11.18□□□□□ -0.62
PTCSC3-201ENST00000556013 ZNF692Q9BU19 519 aaPredicted RBP11.18□□□□□ -0.62
PTCSC3-201ENST00000556013 FAM98CQ17RN3 349 aaKnown RBP11.17□□□□□ -0.62
PTCSC3-201ENST00000556013 COL14A1Q05707 1796 aaKnown RBP11.17□□□□□ -0.62
PTCSC3-201ENST00000556013 CPDO75976 1380 aa11.16□□□□□ -0.62
PTCSC3-201ENST00000556013 SPATA31A1Q5TZJ5 1347 aa11.16□□□□□ -0.62
PTCSC3-201ENST00000556013 EVC2Q86UK5 1308 aa11.16□□□□□ -0.62
PTCSC3-201ENST00000556013 ITSN1Q15811 1721 aa11.16□□□□□ -0.62
PTCSC3-201ENST00000556013 C11orf95C9JLR9 678 aaPredicted RBP11.16□□□□□ -0.62
PTCSC3-201ENST00000556013 GCP02774 474 aa11.16□□□□□ -0.62
PTCSC3-201ENST00000556013 BAG6P46379 1132 aa11.16□□□□□ -0.62
PTCSC3-201ENST00000556013 EVA1CP58658 441 aa11.16□□□□□ -0.62
PTCSC3-201ENST00000556013 BARGINQ6ZT62 677 aa11.16□□□□□ -0.62
PTCSC3-201ENST00000556013 THRAP3Q9Y2W1 955 aaKnown RBP11.16□□□□□ -0.62
PTCSC3-201ENST00000556013 KIAA0232Q92628 1395 aa11.16□□□□□ -0.62
PTCSC3-201ENST00000556013 USP19O94966 1318 aa11.15□□□□□ -0.62
PTCSC3-201ENST00000556013 ZC3H6P61129 1189 aaKnown RBP11.15□□□□□ -0.62
PTCSC3-201ENST00000556013 SIN3AQ96ST3 1273 aa11.15□□□□□ -0.62
PTCSC3-201ENST00000556013 CABP2Q9NPB3 220 aa11.15□□□□□ -0.62
PTCSC3-201ENST00000556013 CABP1Q9NZU7 370 aa11.15□□□□□ -0.62
PTCSC3-201ENST00000556013 ABCA3Q99758 1704 aa11.15□□□□□ -0.63
PTCSC3-201ENST00000556013 PLCH1Q4KWH8 1693 aa11.14□□□□□ -0.63
PTCSC3-201ENST00000556013 A0A0G2JS52 829 aa11.14□□□□□ -0.63
PTCSC3-201ENST00000556013 MYT1Q01538 1121 aa11.14□□□□□ -0.63
PTCSC3-201ENST00000556013 FAM196AQ6ZSG2 479 aa11.14□□□□□ -0.63
PTCSC3-201ENST00000556013 DEFB132Q7Z7B7 95 aa11.14□□□□□ -0.63
PTCSC3-201ENST00000556013 PPIP5K1Q6PFW1 1433 aa11.14□□□□□ -0.63
PTCSC3-201ENST00000556013 CHRNA2Q15822 529 aa11.13□□□□□ -0.63
PTCSC3-201ENST00000556013 NUTM2GQ5VZR2 741 aa11.13□□□□□ -0.63
PTCSC3-201ENST00000556013 SLC24A1O60721 1099 aa11.12□□□□□ -0.63
PTCSC3-201ENST00000556013 NEUROD1Q13562 356 aa11.12□□□□□ -0.63
PTCSC3-201ENST00000556013 TCP11L2Q8N4U5 519 aa11.12□□□□□ -0.63
PTCSC3-201ENST00000556013 PUS7Q96PZ0 661 aaKnown RBP11.12□□□□□ -0.63
PTCSC3-201ENST00000556013 SRCAPQ6ZRS2 3230 aa11.12□□□□□ -0.63
PTCSC3-201ENST00000556013 NRAPQ86VF7 1730 aa11.12□□□□□ -0.63
PTCSC3-201ENST00000556013 BRWD3Q6RI45 1802 aa11.12□□□□□ -0.63
PTCSC3-201ENST00000556013 SSH2Q76I76 1423 aa11.11□□□□□ -0.63
PTCSC3-201ENST00000556013 NLRP6P59044 892 aa11.11□□□□□ -0.63
PTCSC3-201ENST00000556013 PDE3BQ13370 1112 aa11.11□□□□□ -0.63
PTCSC3-201ENST00000556013 KCNH5Q8NCM2 988 aa11.11□□□□□ -0.63
PTCSC3-201ENST00000556013 STRN4Q9NRL3 753 aa11.11□□□□□ -0.63
PTCSC3-201ENST00000556013 CRYBG1Q9Y4K1 1723 aa11.11□□□□□ -0.63
PTCSC3-201ENST00000556013 ROCK2O75116 1388 aaKnown RBP11.11□□□□□ -0.63
PTCSC3-201ENST00000556013 SBNO2Q9Y2G9 1366 aa11.11□□□□□ -0.63
PTCSC3-201ENST00000556013 DISP2A7MBM2 1401 aa11.1□□□□□ -0.63
PTCSC3-201ENST00000556013 USP6P35125 1406 aa11.1□□□□□ -0.63
PTCSC3-201ENST00000556013 TOPAZ1Q8N9V7 1692 aa11.1□□□□□ -0.63
PTCSC3-201ENST00000556013 TTC21AQ8NDW8 1320 aa11.09□□□□□ -0.63
PTCSC3-201ENST00000556013 AATKQ6ZMQ8 1374 aa11.09□□□□□ -0.63
PTCSC3-201ENST00000556013 LARP1Q6PKG0 1096 aaKnown RBP11.09□□□□□ -0.63
PTCSC3-201ENST00000556013 TTC21BQ7Z4L5 1316 aa11.09□□□□□ -0.63
PTCSC3-201ENST00000556013 CDCA7Q9BWT1 371 aaPredicted RBP11.08□□□□□ -0.64
PTCSC3-201ENST00000556013 CAMTA1Q9Y6Y1 1673 aa11.08□□□□□ -0.64
PTCSC3-201ENST00000556013 PARD3Q8TEW0 1356 aa11.07□□□□□ -0.64
PTCSC3-201ENST00000556013 EN1Q05925 392 aaPredicted RBP11.07□□□□□ -0.64
PTCSC3-201ENST00000556013 ARHGEF25Q86VW2 580 aa11.07□□□□□ -0.64
PTCSC3-201ENST00000556013 CAMKK2Q96RR4 588 aa11.07□□□□□ -0.64
PTCSC3-201ENST00000556013 CARD11Q9BXL7 1154 aa11.07□□□□□ -0.64
PTCSC3-201ENST00000556013 USP35Q9P2H5 1018 aa11.07□□□□□ -0.64
PTCSC3-201ENST00000556013 THSD7AQ9UPZ6 1657 aa11.07□□□□□ -0.64
PTCSC3-201ENST00000556013 PHRF1Q9P1Y6 1649 aaKnown RBP11.06□□□□□ -0.64
PTCSC3-201ENST00000556013 CPSF1Q10570 1443 aaKnown RBP11.06□□□□□ -0.64
PTCSC3-201ENST00000556013 TRPM1Q7Z4N2 1603 aa11.06□□□□□ -0.64
PTCSC3-201ENST00000556013 TRIM37O94972 964 aa11.05□□□□□ -0.64
PTCSC3-201ENST00000556013 CRB1P82279 1406 aa11.05□□□□□ -0.64
PTCSC3-201ENST00000556013 FAM182BQ5T319 152 aa11.05□□□□□ -0.64
PTCSC3-201ENST00000556013 SLIT3O75094 1523 aa11.04□□□□□ -0.64
PTCSC3-201ENST00000556013 NRKQ7Z2Y5 1582 aa11.04□□□□□ -0.64
PTCSC3-201ENST00000556013 APBA3O96018 575 aa11.04□□□□□ -0.64
PTCSC3-201ENST00000556013 TOM1L2Q6ZVM7 507 aa11.04□□□□□ -0.64
PTCSC3-201ENST00000556013 COL5A2P05997 1499 aaPredicted RBP11.04□□□□□ -0.64
PTCSC3-201ENST00000556013 LMO7Q8WWI1 1683 aa11.04□□□□□ -0.64
PTCSC3-201ENST00000556013 QRICH2Q9H0J4 1663 aa11.04□□□□□ -0.64
PTCSC3-201ENST00000556013 WDR17Q8IZU2 1322 aa11.04□□□□□ -0.64
PTCSC3-201ENST00000556013 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
PTCSC3-201ENST00000556013 PLSCR1O15162 318 aa11.03□□□□□ -0.64
PTCSC3-201ENST00000556013 EZH2Q15910 746 aaKnown RBP11.03□□□□□ -0.64
PTCSC3-201ENST00000556013 DDB1Q16531 1140 aa11.03□□□□□ -0.64
PTCSC3-201ENST00000556013 CARD10Q9BWT7 1032 aa11.03□□□□□ -0.64
PTCSC3-201ENST00000556013 AXIN2Q9Y2T1 843 aa11.03□□□□□ -0.64
PTCSC3-201ENST00000556013 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
PTCSC3-201ENST00000556013 TONSLQ96HA7 1378 aa11.03□□□□□ -0.64
PTCSC3-201ENST00000556013 TRIM26Q12899 539 aaPredicted RBP11.02□□□□□ -0.65
PTCSC3-201ENST00000556013 NBPF14Q5TI25 921 aa11.02□□□□□ -0.65
PTCSC3-201ENST00000556013 HDGFL2Q7Z4V5 671 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms