RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-222ENST00000555914 NWD2Q9ULI1 1742 aa12.9□□□□□ -0.34
HNRNPC-222ENST00000555914 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.35
HNRNPC-222ENST00000555914 NGDNQ8NEJ9 315 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-222ENST00000555914 CCDC9Q9Y3X0 531 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-222ENST00000555914 PAK3O75914 559 aaPredicted RBP12.89□□□□□ -0.35
HNRNPC-222ENST00000555914 NUDT16Q96DE0 195 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-222ENST00000555914 BTG4Q9NY30 223 aa12.89□□□□□ -0.35
HNRNPC-222ENST00000555914 EIF3AQ14152 1382 aaKnown RBP12.88□□□□□ -0.35
HNRNPC-222ENST00000555914 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-222ENST00000555914 CDK19Q9BWU1 502 aa12.88□□□□□ -0.35
HNRNPC-222ENST00000555914 NRAPQ86VF7 1730 aa12.88□□□□□ -0.35
HNRNPC-222ENST00000555914 CRYBG1Q9Y4K1 1723 aa12.88□□□□□ -0.35
HNRNPC-222ENST00000555914 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
HNRNPC-222ENST00000555914 CLSPNQ9HAW4 1339 aa12.87□□□□□ -0.35
HNRNPC-222ENST00000555914 NUTM2GQ5VZR2 741 aa12.86□□□□□ -0.35
HNRNPC-222ENST00000555914 DEFB132Q7Z7B7 95 aa12.86□□□□□ -0.35
HNRNPC-222ENST00000555914 CCDC125Q86Z20 511 aa12.86□□□□□ -0.35
HNRNPC-222ENST00000555914 ITSN1Q15811 1721 aa12.86□□□□□ -0.35
HNRNPC-222ENST00000555914 KIAA1210Q9ULL0 1709 aa12.85□□□□□ -0.35
HNRNPC-222ENST00000555914 FAM98CQ17RN3 349 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-222ENST00000555914 COL14A1Q05707 1796 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-222ENST00000555914 KRT27Q7Z3Y8 459 aa12.84□□□□□ -0.35
HNRNPC-222ENST00000555914 ACEP12821 1306 aa12.84□□□□□ -0.35
HNRNPC-222ENST00000555914 TOPAZ1Q8N9V7 1692 aa12.84□□□□□ -0.35
HNRNPC-222ENST00000555914 BLMP54132 1417 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-222ENST00000555914 A0A0G2JS52 829 aa12.83□□□□□ -0.36
HNRNPC-222ENST00000555914 PRKCSHP14314 528 aaPredicted RBP12.83□□□□□ -0.36
HNRNPC-222ENST00000555914 CHRNA2Q15822 529 aa12.83□□□□□ -0.36
HNRNPC-222ENST00000555914 NBPF8Q3BBV2 869 aa12.83□□□□□ -0.36
HNRNPC-222ENST00000555914 FAM182BQ5T319 152 aa12.83□□□□□ -0.36
HNRNPC-222ENST00000555914 PRDM11Q9NQV5 511 aa12.83□□□□□ -0.36
HNRNPC-222ENST00000555914 ZRANB1Q9UGI0 708 aa12.83□□□□□ -0.36
HNRNPC-222ENST00000555914 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
HNRNPC-222ENST00000555914 POLR3AO14802 1390 aaPredicted RBP12.83□□□□□ -0.36
HNRNPC-222ENST00000555914 KIAA0232Q92628 1395 aa12.83□□□□□ -0.36
HNRNPC-222ENST00000555914 ZC3H6P61129 1189 aaKnown RBP12.82□□□□□ -0.36
HNRNPC-222ENST00000555914 L3MBTL2Q969R5 705 aa12.82□□□□□ -0.36
HNRNPC-222ENST00000555914 SIN3AQ96ST3 1273 aa12.82□□□□□ -0.36
HNRNPC-222ENST00000555914 PHRF1Q9P1Y6 1649 aaKnown RBP12.82□□□□□ -0.36
HNRNPC-222ENST00000555914 PLEKHG3A1L390 1219 aa12.81□□□□□ -0.36
HNRNPC-222ENST00000555914 SPATA31A5Q5VU36 1347 aa12.81□□□□□ -0.36
HNRNPC-222ENST00000555914 SPATA31A7Q8IWB4 1347 aa12.81□□□□□ -0.36
HNRNPC-222ENST00000555914 CABP2Q9NPB3 220 aa12.81□□□□□ -0.36
HNRNPC-222ENST00000555914 ERICH6Q7L0X2 663 aa12.8□□□□□ -0.36
HNRNPC-222ENST00000555914 CENPJQ9HC77 1338 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-222ENST00000555914 SRPK2P78362 688 aaKnown RBP12.8□□□□□ -0.36
HNRNPC-222ENST00000555914 ABTB2Q8N961 1025 aa12.79□□□□□ -0.36
HNRNPC-222ENST00000555914 STRN4Q9NRL3 753 aa12.79□□□□□ -0.36
HNRNPC-222ENST00000555914 PPIP5K1Q6PFW1 1433 aa12.78□□□□□ -0.36
HNRNPC-222ENST00000555914 QRICH2Q9H0J4 1663 aa12.78□□□□□ -0.36
HNRNPC-222ENST00000555914 THSD7AQ9UPZ6 1657 aa12.78□□□□□ -0.36
HNRNPC-222ENST00000555914 SPATA31A1Q5TZJ5 1347 aa12.77□□□□□ -0.36
HNRNPC-222ENST00000555914 SF3B2Q13435 895 aaKnown RBP12.77□□□□□ -0.36
HNRNPC-222ENST00000555914 NEUROD1Q13562 356 aa12.77□□□□□ -0.36
HNRNPC-222ENST00000555914 USP35Q9P2H5 1018 aa12.77□□□□□ -0.36
HNRNPC-222ENST00000555914 NRKQ7Z2Y5 1582 aa12.77□□□□□ -0.37
HNRNPC-222ENST00000555914 CABP1Q9NZU7 370 aa12.76□□□□□ -0.37
HNRNPC-222ENST00000555914 CAMTA1Q9Y6Y1 1673 aa12.75□□□□□ -0.37
HNRNPC-222ENST00000555914 TRPM1Q7Z4N2 1603 aa12.75□□□□□ -0.37
HNRNPC-222ENST00000555914 USP19O94966 1318 aa12.75□□□□□ -0.37
HNRNPC-222ENST00000555914 GCP02774 474 aa12.74□□□□□ -0.37
HNRNPC-222ENST00000555914 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
HNRNPC-222ENST00000555914 LARP1Q6PKG0 1096 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-222ENST00000555914 SSH2Q76I76 1423 aa12.74□□□□□ -0.37
HNRNPC-222ENST00000555914 LMO7Q8WWI1 1683 aa12.74□□□□□ -0.37
HNRNPC-222ENST00000555914 USP6P35125 1406 aa12.72□□□□□ -0.37
HNRNPC-222ENST00000555914 PSDA5PKW4 1024 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-222ENST00000555914 BAG6P46379 1132 aa12.72□□□□□ -0.37
HNRNPC-222ENST00000555914 EVA1CP58658 441 aa12.72□□□□□ -0.37
HNRNPC-222ENST00000555914 NLRP13Q86W25 1043 aa12.72□□□□□ -0.37
HNRNPC-222ENST00000555914 CPDO75976 1380 aa12.72□□□□□ -0.37
HNRNPC-222ENST00000555914 ROCK2O75116 1388 aaKnown RBP12.71□□□□□ -0.37
HNRNPC-222ENST00000555914 RGPD1P0DJD0 1748 aa12.71□□□□□ -0.37
HNRNPC-222ENST00000555914 TNS1Q9HBL0 1735 aaKnown RBP12.71□□□□□ -0.37
HNRNPC-222ENST00000555914 NLRP6P59044 892 aa12.7□□□□□ -0.38
HNRNPC-222ENST00000555914 ZBTB7CA1YPR0 619 aa12.7□□□□□ -0.38
HNRNPC-222ENST00000555914 TRIM37O94972 964 aa12.7□□□□□ -0.38
HNRNPC-222ENST00000555914 EZH2Q15910 746 aaKnown RBP12.7□□□□□ -0.38
HNRNPC-222ENST00000555914 BARGINQ6ZT62 677 aa12.7□□□□□ -0.38
HNRNPC-222ENST00000555914 PIK3C2AO00443 1686 aa12.7□□□□□ -0.38
HNRNPC-222ENST00000555914 EVC2Q86UK5 1308 aa12.69□□□□□ -0.38
HNRNPC-222ENST00000555914 COL5A2P05997 1499 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-222ENST00000555914 TCP11L2Q8N4U5 519 aa12.68□□□□□ -0.38
HNRNPC-222ENST00000555914 SLIT3O75094 1523 aa12.68□□□□□ -0.38
HNRNPC-222ENST00000555914 FAM196AQ6ZSG2 479 aa12.67□□□□□ -0.38
HNRNPC-222ENST00000555914 AXIN2Q9Y2T1 843 aa12.67□□□□□ -0.38
HNRNPC-222ENST00000555914 UTRNP46939 3433 aa12.67□□□□□ -0.38
HNRNPC-222ENST00000555914 BRD4O60885 1362 aaPredicted RBP12.67□□□□□ -0.38
HNRNPC-222ENST00000555914 DISP2A7MBM2 1401 aa12.67□□□□□ -0.38
HNRNPC-222ENST00000555914 PDE3BQ13370 1112 aa12.67□□□□□ -0.38
HNRNPC-222ENST00000555914 CAMKK2Q96RR4 588 aa12.67□□□□□ -0.38
HNRNPC-222ENST00000555914 R3HDM1Q15032 1099 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-222ENST00000555914 GTF3C3Q9Y5Q9 886 aa12.66□□□□□ -0.38
HNRNPC-222ENST00000555914 COL18A1P39060 1754 aa12.66□□□□□ -0.38
HNRNPC-222ENST00000555914 TTC21BQ7Z4L5 1316 aa12.66□□□□□ -0.38
HNRNPC-222ENST00000555914 AKAP12Q02952 1782 aa12.65□□□□□ -0.38
HNRNPC-222ENST00000555914 SOX12O15370 315 aa12.65□□□□□ -0.38
HNRNPC-222ENST00000555914 APBA3O96018 575 aa12.65□□□□□ -0.38
HNRNPC-222ENST00000555914 AATKQ6ZMQ8 1374 aa12.65□□□□□ -0.38
HNRNPC-222ENST00000555914 CRB1P82279 1406 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms