RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
TMEM260-208ENST00000555905 CGNL1Q0VF96 1302 aa15.06■□□□□ 0
TMEM260-208ENST00000555905 EDC4Q6P2E9 1401 aaKnown RBP15.06■□□□□ 0
TMEM260-208ENST00000555905 ORAI2Q96SN7 254 aa15.05■□□□□ -0
TMEM260-208ENST00000555905 SLAIN2Q9P270 581 aa15.05■□□□□ -0
TMEM260-208ENST00000555905 NPC1L1Q9UHC9 1359 aa15.04■□□□□ -0
TMEM260-208ENST00000555905 CNGB1Q14028 1251 aaPredicted RBP15.04■□□□□ -0
TMEM260-208ENST00000555905 USP6P35125 1406 aa15.03■□□□□ -0
TMEM260-208ENST00000555905 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
TMEM260-208ENST00000555905 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
TMEM260-208ENST00000555905 KIF20BQ96Q89 1820 aa15.03■□□□□ -0
TMEM260-208ENST00000555905 NSD2O96028 1365 aa15.02■□□□□ -0
TMEM260-208ENST00000555905 PSME1Q06323 249 aa15.02■□□□□ -0
TMEM260-208ENST00000555905 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.02■□□□□ -0
TMEM260-208ENST00000555905 NRKQ7Z2Y5 1582 aa15.02□□□□□ -0.01
TMEM260-208ENST00000555905 IQSEC2Q5JU85 1478 aa15.01□□□□□ -0.01
TMEM260-208ENST00000555905 BRD4O60885 1362 aaPredicted RBP15.01□□□□□ -0.01
TMEM260-208ENST00000555905 MYCNP04198 464 aaPredicted RBP15.01□□□□□ -0.01
TMEM260-208ENST00000555905 RALBP1Q15311 655 aa15.01□□□□□ -0.01
TMEM260-208ENST00000555905 PRKRIP1Q9H875 184 aaPredicted RBP15.01□□□□□ -0.01
TMEM260-208ENST00000555905 TTC21BQ7Z4L5 1316 aa15□□□□□ -0.01
TMEM260-208ENST00000555905 FOXO3O43524 673 aa15□□□□□ -0.01
TMEM260-208ENST00000555905 MIER1Q8N108 512 aa15□□□□□ -0.01
TMEM260-208ENST00000555905 NPHP3Q7Z494 1330 aa14.99□□□□□ -0.01
TMEM260-208ENST00000555905 TTC21AQ8NDW8 1320 aa14.99□□□□□ -0.01
TMEM260-208ENST00000555905 BRINP3Q76B58 766 aa14.99□□□□□ -0.01
TMEM260-208ENST00000555905 ANKRD26Q9UPS8 1709 aa14.99□□□□□ -0.01
TMEM260-208ENST00000555905 FYB1O15117 783 aa14.98□□□□□ -0.01
TMEM260-208ENST00000555905 TOM1O60784 492 aa14.98□□□□□ -0.01
TMEM260-208ENST00000555905 CERKQ8TCT0 537 aa14.98□□□□□ -0.01
TMEM260-208ENST00000555905 SSH2Q76I76 1423 aa14.98□□□□□ -0.01
TMEM260-208ENST00000555905 PARD3Q8TEW0 1356 aa14.98□□□□□ -0.01
TMEM260-208ENST00000555905 PAK3O75914 559 aaPredicted RBP14.97□□□□□ -0.01
TMEM260-208ENST00000555905 KRT28Q7Z3Y7 464 aa14.97□□□□□ -0.01
TMEM260-208ENST00000555905 MORC1Q86VD1 984 aa14.97□□□□□ -0.01
TMEM260-208ENST00000555905 NME9Q86XW9 330 aa14.96□□□□□ -0.01
TMEM260-208ENST00000555905 GGNBP2Q9H3C7 697 aa14.96□□□□□ -0.01
TMEM260-208ENST00000555905 XPCQ01831 940 aaPredicted RBP14.95□□□□□ -0.02
TMEM260-208ENST00000555905 COG3Q96JB2 828 aa14.95□□□□□ -0.02
TMEM260-208ENST00000555905 ROBO1Q9Y6N7 1651 aa14.95□□□□□ -0.02
TMEM260-208ENST00000555905 TRPM3Q9HCF6 1732 aaPredicted RBP14.95□□□□□ -0.02
TMEM260-208ENST00000555905 MYBBP1AQ9BQG0 1328 aaKnown RBP14.94□□□□□ -0.02
TMEM260-208ENST00000555905 PIK3C2AO00443 1686 aa14.94□□□□□ -0.02
TMEM260-208ENST00000555905 UBAP1LF5GYI3 381 aa14.94□□□□□ -0.02
TMEM260-208ENST00000555905 ABTB2Q8N961 1025 aa14.94□□□□□ -0.02
TMEM260-208ENST00000555905 NHSL1Q5SYE7 1610 aa14.94□□□□□ -0.02
TMEM260-208ENST00000555905 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
TMEM260-208ENST00000555905 PXDNQ92626 1479 aa14.93□□□□□ -0.02
TMEM260-208ENST00000555905 CCER2I3L3R5 266 aa14.92□□□□□ -0.02
TMEM260-208ENST00000555905 DDX17Q92841 729 aaKnown RBP14.92□□□□□ -0.02
TMEM260-208ENST00000555905 USP31Q70CQ4 1352 aa14.91□□□□□ -0.02
TMEM260-208ENST00000555905 TNNT2P45379 298 aaPredicted RBP14.91□□□□□ -0.02
TMEM260-208ENST00000555905 NLRP6P59044 892 aa14.91□□□□□ -0.02
TMEM260-208ENST00000555905 PIP4K2BP78356 416 aa14.91□□□□□ -0.02
TMEM260-208ENST00000555905 LMOD2Q6P5Q4 547 aa14.91□□□□□ -0.02
TMEM260-208ENST00000555905 ZRANB1Q9UGI0 708 aa14.91□□□□□ -0.02
TMEM260-208ENST00000555905 OVOS2A0A0J9YW53 1432 aa14.91□□□□□ -0.02
TMEM260-208ENST00000555905 OVOS2Q6IE36 1432 aa14.91□□□□□ -0.02
TMEM260-208ENST00000555905 USP54Q70EL1 1684 aa14.9□□□□□ -0.02
TMEM260-208ENST00000555905 PPP2R1AP30153 589 aa14.9□□□□□ -0.02
TMEM260-208ENST00000555905 NLRP13Q86W25 1043 aa14.9□□□□□ -0.02
TMEM260-208ENST00000555905 SPINK5Q9NQ38 1064 aaPredicted RBP14.9□□□□□ -0.02
TMEM260-208ENST00000555905 TNS3Q68CZ2 1445 aa14.9□□□□□ -0.02
TMEM260-208ENST00000555905 ALS2Q96Q42 1657 aa14.9□□□□□ -0.02
TMEM260-208ENST00000555905 SOS2Q07890 1332 aaPredicted RBP14.9□□□□□ -0.02
TMEM260-208ENST00000555905 AHDC1Q5TGY3 1603 aaPredicted RBP14.89□□□□□ -0.03
TMEM260-208ENST00000555905 NUTM2GQ5VZR2 741 aa14.89□□□□□ -0.03
TMEM260-208ENST00000555905 SAMD1Q6SPF0 538 aaPredicted RBP14.89□□□□□ -0.03
TMEM260-208ENST00000555905 ARHGEF10O15013 1369 aa14.88□□□□□ -0.03
TMEM260-208ENST00000555905 SPATA31A3Q5VYP0 1347 aa14.88□□□□□ -0.03
TMEM260-208ENST00000555905 MARF1Q9Y4F3 1742 aaKnown RBP14.87□□□□□ -0.03
TMEM260-208ENST00000555905 MRS2Q9HD23 443 aa14.87□□□□□ -0.03
TMEM260-208ENST00000555905 PHLPP1O60346 1717 aa14.86□□□□□ -0.03
TMEM260-208ENST00000555905 MAP2P11137 1827 aaKnown RBP14.86□□□□□ -0.03
TMEM260-208ENST00000555905 AATKQ6ZMQ8 1374 aa14.85□□□□□ -0.03
TMEM260-208ENST00000555905 SOX12O15370 315 aa14.84□□□□□ -0.03
TMEM260-208ENST00000555905 MTHFSP49914 203 aa14.84□□□□□ -0.03
TMEM260-208ENST00000555905 KCNH5Q8NCM2 988 aa14.84□□□□□ -0.03
TMEM260-208ENST00000555905 LRRC59Q96AG4 307 aaKnown RBP14.84□□□□□ -0.03
TMEM260-208ENST00000555905 CAPN15O75808 1086 aa14.83□□□□□ -0.04
TMEM260-208ENST00000555905 CFAP53Q96M91 514 aa14.83□□□□□ -0.04
TMEM260-208ENST00000555905 USP19O94966 1318 aa14.83□□□□□ -0.04
TMEM260-208ENST00000555905 SLIT3O75094 1523 aa14.82□□□□□ -0.04
TMEM260-208ENST00000555905 MED1Q15648 1581 aaPredicted RBP14.82□□□□□ -0.04
TMEM260-208ENST00000555905 CCDC184Q52MB2 194 aa14.82□□□□□ -0.04
TMEM260-208ENST00000555905 POLKQ9UBT6 870 aa14.82□□□□□ -0.04
TMEM260-208ENST00000555905 COL16A1Q07092 1604 aaPredicted RBP14.81□□□□□ -0.04
TMEM260-208ENST00000555905 PPM1GO15355 546 aaPredicted RBP14.81□□□□□ -0.04
TMEM260-208ENST00000555905 PLEKHG5O94827 1062 aa14.81□□□□□ -0.04
TMEM260-208ENST00000555905 GCP02774 474 aa14.81□□□□□ -0.04
TMEM260-208ENST00000555905 RRS1Q15050 365 aaKnown RBP14.81□□□□□ -0.04
TMEM260-208ENST00000555905 SMG6Q86US8 1419 aaKnown RBP14.81□□□□□ -0.04
TMEM260-208ENST00000555905 PHRF1Q9P1Y6 1649 aaKnown RBP14.81□□□□□ -0.04
TMEM260-208ENST00000555905 FBLN1P23142 703 aa14.8□□□□□ -0.04
TMEM260-208ENST00000555905 NFAT5O94916 1531 aa14.8□□□□□ -0.04
TMEM260-208ENST00000555905 LTN1O94822 1766 aa14.8□□□□□ -0.04
TMEM260-208ENST00000555905 HAP1P54257 671 aaPredicted RBP14.79□□□□□ -0.04
TMEM260-208ENST00000555905 CDK12Q9NYV4 1490 aaPredicted RBP14.79□□□□□ -0.04
TMEM260-208ENST00000555905 CRYBG1Q9Y4K1 1723 aa14.79□□□□□ -0.04
TMEM260-208ENST00000555905 EMILIN1Q9Y6C2 1016 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms