RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 YBX3P16989 372 aaKnown RBP eCLIP18.5■□□□□ 0.55
ABCD4-222ENST00000555617 SBF2Q86WG5 1849 aa18.49■□□□□ 0.55
ABCD4-222ENST00000555617 NUTM2FA1L443 756 aa18.49■□□□□ 0.55
ABCD4-222ENST00000555617 KIF3CO14782 793 aa18.49■□□□□ 0.55
ABCD4-222ENST00000555617 LRPPRCP42704 1394 aaKnown RBP18.47■□□□□ 0.55
ABCD4-222ENST00000555617 PROM2Q8N271 834 aa18.47■□□□□ 0.55
ABCD4-222ENST00000555617 MTFR1LQ9H019 292 aa18.47■□□□□ 0.55
ABCD4-222ENST00000555617 E9PCH4 1651 aa18.47■□□□□ 0.55
ABCD4-222ENST00000555617 PTF1AQ7RTS3 328 aa18.46■□□□□ 0.55
ABCD4-222ENST00000555617 CCDC144AA2RUR9 1427 aa18.46■□□□□ 0.55
ABCD4-222ENST00000555617 KIF1AQ12756 1690 aa18.45■□□□□ 0.54
ABCD4-222ENST00000555617 NLGN2Q8NFZ4 835 aa18.45■□□□□ 0.54
ABCD4-222ENST00000555617 KLRG1Q96E93 195 aa18.45■□□□□ 0.54
ABCD4-222ENST00000555617 TECPR2O15040 1411 aa18.45■□□□□ 0.54
ABCD4-222ENST00000555617 RRBP1Q9P2E9 1410 aaKnown RBP18.45■□□□□ 0.54
ABCD4-222ENST00000555617 PEAK1Q9H792 1746 aa18.45■□□□□ 0.54
ABCD4-222ENST00000555617 SPATA31A1Q5TZJ5 1347 aa18.45■□□□□ 0.54
ABCD4-222ENST00000555617 KRT28Q7Z3Y7 464 aa18.44■□□□□ 0.54
ABCD4-222ENST00000555617 RGPD8O14715 1765 aaPredicted RBP18.43■□□□□ 0.54
ABCD4-222ENST00000555617 FAM161AQ3B820 660 aa18.43■□□□□ 0.54
ABCD4-222ENST00000555617 BCL11BQ9C0K0 894 aaPredicted RBP18.42■□□□□ 0.54
ABCD4-222ENST00000555617 PRAG1Q86YV5 1406 aa18.41■□□□□ 0.54
ABCD4-222ENST00000555617 CRYBG1Q9Y4K1 1723 aa18.4■□□□□ 0.54
ABCD4-222ENST00000555617 KLHL34Q8N239 644 aa18.4■□□□□ 0.54
ABCD4-222ENST00000555617 FMN2Q9NZ56 1722 aa18.39■□□□□ 0.53
ABCD4-222ENST00000555617 PLSCR1O15162 318 aa18.38■□□□□ 0.53
ABCD4-222ENST00000555617 NAIPQ13075 1403 aa18.37■□□□□ 0.53
ABCD4-222ENST00000555617 MYOM3Q5VTT5 1437 aa18.37■□□□□ 0.53
ABCD4-222ENST00000555617 COL24A1Q17RW2 1714 aa18.37■□□□□ 0.53
ABCD4-222ENST00000555617 HFM1A2PYH4 1435 aa18.36■□□□□ 0.53
ABCD4-222ENST00000555617 SLC15A2Q16348 729 aa18.36■□□□□ 0.53
ABCD4-222ENST00000555617 PDE3BQ13370 1112 aa18.35■□□□□ 0.53
ABCD4-222ENST00000555617 LMOD2Q6P5Q4 547 aa18.35■□□□□ 0.53
ABCD4-222ENST00000555617 AATKQ6ZMQ8 1374 aa18.33■□□□□ 0.53
ABCD4-222ENST00000555617 STK32BQ9NY57 414 aa18.32■□□□□ 0.52
ABCD4-222ENST00000555617 TRPM3Q9HCF6 1732 aaPredicted RBP18.32■□□□□ 0.52
ABCD4-222ENST00000555617 HSPA1AP0DMV8 641 aaKnown RBP18.31■□□□□ 0.52
ABCD4-222ENST00000555617 HSPA1BP0DMV9 641 aaKnown RBP18.31■□□□□ 0.52
ABCD4-222ENST00000555617 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
ABCD4-222ENST00000555617 KIAA1210Q9ULL0 1709 aa18.31■□□□□ 0.52
ABCD4-222ENST00000555617 SBNO1A3KN83 1393 aa18.3■□□□□ 0.52
ABCD4-222ENST00000555617 PARP4Q9UKK3 1724 aaKnown RBP18.3■□□□□ 0.52
ABCD4-222ENST00000555617 ALS2Q96Q42 1657 aa18.3■□□□□ 0.52
ABCD4-222ENST00000555617 PAPPAQ13219 1627 aa18.3■□□□□ 0.52
ABCD4-222ENST00000555617 ARHGEF10O15013 1369 aa18.3■□□□□ 0.52
ABCD4-222ENST00000555617 ARHGEF28Q8N1W1 1705 aaKnown RBP18.29■□□□□ 0.52
ABCD4-222ENST00000555617 TOPAZ1Q8N9V7 1692 aa18.29■□□□□ 0.52
ABCD4-222ENST00000555617 GRIN3BO60391 1043 aa18.29■□□□□ 0.52
ABCD4-222ENST00000555617 DAPK1P53355 1430 aa18.27■□□□□ 0.52
ABCD4-222ENST00000555617 STRN4Q9NRL3 753 aa18.26■□□□□ 0.51
ABCD4-222ENST00000555617 BARGINQ6ZT62 677 aa18.25■□□□□ 0.51
ABCD4-222ENST00000555617 CHIC2Q9UKJ5 165 aa18.25■□□□□ 0.51
ABCD4-222ENST00000555617 TXNRD1Q16881 649 aa18.24■□□□□ 0.51
ABCD4-222ENST00000555617 NRXN1Q9ULB1 1477 aa18.24■□□□□ 0.51
ABCD4-222ENST00000555617 TOMM70O94826 608 aa18.22■□□□□ 0.51
ABCD4-222ENST00000555617 CHRNA2Q15822 529 aa18.22■□□□□ 0.51
ABCD4-222ENST00000555617 ZNF326Q5BKZ1 582 aaKnown RBP18.22■□□□□ 0.51
ABCD4-222ENST00000555617 IFT172Q9UG01 1749 aa18.22■□□□□ 0.51
ABCD4-222ENST00000555617 LRRC37A3O60309 1634 aa18.22■□□□□ 0.51
ABCD4-222ENST00000555617 PHRF1Q9P1Y6 1649 aaKnown RBP18.22■□□□□ 0.51
ABCD4-222ENST00000555617 OVOS2A0A0G2JMS6 1433 aa18.22■□□□□ 0.51
ABCD4-222ENST00000555617 OVOS2A0A0J9YW53 1432 aa18.22■□□□□ 0.51
ABCD4-222ENST00000555617 OVOS2Q6IE36 1432 aa18.22■□□□□ 0.51
ABCD4-222ENST00000555617 PLEKHH1Q9ULM0 1364 aa18.21■□□□□ 0.51
ABCD4-222ENST00000555617 ATP7BP35670 1465 aa18.2■□□□□ 0.5
ABCD4-222ENST00000555617 PSME1Q06323 249 aa18.2■□□□□ 0.5
ABCD4-222ENST00000555617 PRDM11Q9NQV5 511 aa18.2■□□□□ 0.5
ABCD4-222ENST00000555617 PHF8Q9UPP1 1060 aa18.2■□□□□ 0.5
ABCD4-222ENST00000555617 SSH2Q76I76 1423 aa18.19■□□□□ 0.5
ABCD4-222ENST00000555617 WAPLQ7Z5K2 1190 aa18.19■□□□□ 0.5
ABCD4-222ENST00000555617 TUBGCP6Q96RT7 1819 aa18.19■□□□□ 0.5
ABCD4-222ENST00000555617 ANKRD30AQ9BXX3 1397 aa18.18■□□□□ 0.5
ABCD4-222ENST00000555617 ZNF827Q17R98 1081 aa18.18■□□□□ 0.5
ABCD4-222ENST00000555617 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
ABCD4-222ENST00000555617 TULP4Q9NRJ4 1543 aa18.17■□□□□ 0.5
ABCD4-222ENST00000555617 LARP1Q6PKG0 1096 aaKnown RBP18.15■□□□□ 0.5
ABCD4-222ENST00000555617 DHX57Q6P158 1386 aaKnown RBP18.15■□□□□ 0.5
ABCD4-222ENST00000555617 TNRC18O15417 2968 aaPredicted RBP18.13■□□□□ 0.49
ABCD4-222ENST00000555617 QSER1Q2KHR3 1735 aa18.13■□□□□ 0.49
ABCD4-222ENST00000555617 NMRK2Q9NPI5 230 aa18.13■□□□□ 0.49
ABCD4-222ENST00000555617 CLTCL1P53675 1640 aa18.12■□□□□ 0.49
ABCD4-222ENST00000555617 TCP11L2Q8N4U5 519 aa18.12■□□□□ 0.49
ABCD4-222ENST00000555617 ANKRD50Q9ULJ7 1429 aa18.11■□□□□ 0.49
ABCD4-222ENST00000555617 AKAP12Q02952 1782 aa18.09■□□□□ 0.49
ABCD4-222ENST00000555617 LMO7Q8WWI1 1683 aa18.09■□□□□ 0.49
ABCD4-222ENST00000555617 PDE4DIPQ5VU43 2346 aa18.09■□□□□ 0.49
ABCD4-222ENST00000555617 POLD1P28340 1107 aa18.08■□□□□ 0.48
ABCD4-222ENST00000555617 MLLT1Q03111 559 aaPredicted RBP18.08■□□□□ 0.48
ABCD4-222ENST00000555617 PMFBP1Q8TBY8 1022 aa18.07■□□□□ 0.48
ABCD4-222ENST00000555617 RBM46Q8TBY0 533 aaKnown RBP18.06■□□□□ 0.48
ABCD4-222ENST00000555617 WNK3Q9BYP7 1800 aa18.06■□□□□ 0.48
ABCD4-222ENST00000555617 KNDC1Q76NI1 1749 aa18.06■□□□□ 0.48
ABCD4-222ENST00000555617 KANK4Q5T7N3 995 aaPredicted RBP18.04■□□□□ 0.48
ABCD4-222ENST00000555617 C11orf95C9JLR9 678 aaPredicted RBP18.03■□□□□ 0.48
ABCD4-222ENST00000555617 ZC3H6P61129 1189 aaKnown RBP18.03■□□□□ 0.48
ABCD4-222ENST00000555617 MARCH10Q8NA82 808 aaPredicted RBP18.03■□□□□ 0.48
ABCD4-222ENST00000555617 PNPLA7Q6ZV29 1317 aa18.02■□□□□ 0.48
ABCD4-222ENST00000555617 ABHD8Q96I13 439 aa18.02■□□□□ 0.48
ABCD4-222ENST00000555617 STK26Q9P289 416 aa18.02■□□□□ 0.48
ABCD4-222ENST00000555617 CICQ96RK0 1608 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms