RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 ARHGEF40Q8TER5 1519 aa20.61■□□□□ 0.89
TUBB3-209ENST00000555609 SRPK2P78362 688 aaKnown RBP20.61■□□□□ 0.89
TUBB3-209ENST00000555609 PDZRN3Q9UPQ7 1066 aa20.61■□□□□ 0.89
TUBB3-209ENST00000555609 PNPLA6Q8IY17 1366 aa20.61■□□□□ 0.89
TUBB3-209ENST00000555609 YTHDC2Q9H6S0 1430 aaKnown RBP20.6■□□□□ 0.89
TUBB3-209ENST00000555609 PREX1Q8TCU6 1659 aa20.6■□□□□ 0.89
TUBB3-209ENST00000555609 FTSJ3Q8IY81 847 aaKnown RBP20.6■□□□□ 0.89
TUBB3-209ENST00000555609 NLRP1Q9C000 1473 aa20.59■□□□□ 0.89
TUBB3-209ENST00000555609 HDAC1Q13547 482 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-209ENST00000555609 HDGFL2Q7Z4V5 671 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-209ENST00000555609 DDX19BQ9UMR2 479 aa20.59■□□□□ 0.89
TUBB3-209ENST00000555609 FYB1O15117 783 aa20.58■□□□□ 0.88
TUBB3-209ENST00000555609 ZNF428Q96B54 188 aa20.58■□□□□ 0.88
TUBB3-209ENST00000555609 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.88
TUBB3-209ENST00000555609 TRIM35Q9UPQ4 493 aa20.57■□□□□ 0.88
TUBB3-209ENST00000555609 CD163L1Q9NR16 1453 aa20.57■□□□□ 0.88
TUBB3-209ENST00000555609 CDC42BPGQ6DT37 1551 aa20.57■□□□□ 0.88
TUBB3-209ENST00000555609 TBC1D32Q96NH3 1257 aa20.56■□□□□ 0.88
TUBB3-209ENST00000555609 IPO8O15397 1037 aaKnown RBP20.56■□□□□ 0.88
TUBB3-209ENST00000555609 NUTM2DQ5VT03 806 aaPredicted RBP20.56■□□□□ 0.88
TUBB3-209ENST00000555609 POGKQ9P215 609 aa20.56■□□□□ 0.88
TUBB3-209ENST00000555609 DIAPH1O60610 1272 aaKnown RBP20.55■□□□□ 0.88
TUBB3-209ENST00000555609 SMC4Q9NTJ3 1288 aa20.55■□□□□ 0.88
TUBB3-209ENST00000555609 DLC1Q96QB1 1528 aa20.55■□□□□ 0.88
TUBB3-209ENST00000555609 U2SURPO15042 1029 aaKnown RBP20.54■□□□□ 0.88
TUBB3-209ENST00000555609 FCHSD2O94868 740 aa20.54■□□□□ 0.88
TUBB3-209ENST00000555609 SEC24BO95487 1268 aa20.54■□□□□ 0.88
TUBB3-209ENST00000555609 EXOSC9Q06265 439 aaKnown RBP20.54■□□□□ 0.88
TUBB3-209ENST00000555609 ALDH1L2Q3SY69 923 aa20.54■□□□□ 0.88
TUBB3-209ENST00000555609 ATF7IPQ6VMQ6 1270 aa20.54■□□□□ 0.88
TUBB3-209ENST00000555609 BCL2L13Q9BXK5 485 aa20.54■□□□□ 0.88
TUBB3-209ENST00000555609 KIF16BQ96L93 1317 aa20.54■□□□□ 0.88
TUBB3-209ENST00000555609 BRPF1P55201 1214 aaPredicted RBP20.54■□□□□ 0.88
TUBB3-209ENST00000555609 PRAM1Q96QH2 718 aa20.54■□□□□ 0.88
TUBB3-209ENST00000555609 GGNBP2Q9H3C7 697 aa20.54■□□□□ 0.88
TUBB3-209ENST00000555609 TNNQ9UQP3 1299 aa20.54■□□□□ 0.88
TUBB3-209ENST00000555609 STK26Q9P289 416 aa20.53■□□□□ 0.88
TUBB3-209ENST00000555609 ALKQ9UM73 1620 aa20.53■□□□□ 0.88
TUBB3-209ENST00000555609 CHMP4BQ9H444 224 aaKnown RBP20.52■□□□□ 0.87
TUBB3-209ENST00000555609 TRIM27P14373 513 aa20.51■□□□□ 0.87
TUBB3-209ENST00000555609 SSH1Q8WYL5 1049 aa20.51■□□□□ 0.87
TUBB3-209ENST00000555609 ATP7BP35670 1465 aa20.51■□□□□ 0.87
TUBB3-209ENST00000555609 FRAT2O75474 233 aaPredicted RBP20.5■□□□□ 0.87
TUBB3-209ENST00000555609 RIPK4P57078 832 aa20.5■□□□□ 0.87
TUBB3-209ENST00000555609 SAFB2Q14151 953 aaKnown RBP eCLIP20.5■□□□□ 0.87
TUBB3-209ENST00000555609 MLECQ14165 292 aa20.5■□□□□ 0.87
TUBB3-209ENST00000555609 MYO5BQ9ULV0 1848 aa20.5■□□□□ 0.87
TUBB3-209ENST00000555609 PPIP5K1Q6PFW1 1433 aa20.5■□□□□ 0.87
TUBB3-209ENST00000555609 CALD1Q05682 793 aaKnown RBP20.5■□□□□ 0.87
TUBB3-209ENST00000555609 SMC5Q8IY18 1101 aa20.5■□□□□ 0.87
TUBB3-209ENST00000555609 TSR2Q969E8 191 aaKnown RBP20.5■□□□□ 0.87
TUBB3-209ENST00000555609 CDK19Q9BWU1 502 aa20.5■□□□□ 0.87
TUBB3-209ENST00000555609 KIF20BQ96Q89 1820 aa20.49■□□□□ 0.87
TUBB3-209ENST00000555609 REREQ9P2R6 1566 aa20.49■□□□□ 0.87
TUBB3-209ENST00000555609 MINK1Q8N4C8 1332 aaPredicted RBP20.49■□□□□ 0.87
TUBB3-209ENST00000555609 AGLP35573 1532 aa20.46■□□□□ 0.87
TUBB3-209ENST00000555609 NOB1Q9ULX3 412 aaKnown RBP20.46■□□□□ 0.87
TUBB3-209ENST00000555609 ITPRIPQ8IWB1 547 aa20.45■□□□□ 0.86
TUBB3-209ENST00000555609 ANTXR1Q9H6X2 564 aa20.45■□□□□ 0.86
TUBB3-209ENST00000555609 ZBTB40Q9NUA8 1239 aa20.45■□□□□ 0.86
TUBB3-209ENST00000555609 FAM135BQ49AJ0 1406 aa20.45■□□□□ 0.86
TUBB3-209ENST00000555609 ARHGAP45Q92619 1136 aa20.44■□□□□ 0.86
TUBB3-209ENST00000555609 KDM4FA0A1W2PPD8 638 aa20.43■□□□□ 0.86
TUBB3-209ENST00000555609 CABP1Q9NZU7 370 aa20.43■□□□□ 0.86
TUBB3-209ENST00000555609 TBC1D2Q9BYX2 928 aa20.42■□□□□ 0.86
TUBB3-209ENST00000555609 RSPH6AQ9H0K4 717 aa20.42■□□□□ 0.86
TUBB3-209ENST00000555609 TMEM57Q8N5G2 664 aa20.41■□□□□ 0.86
TUBB3-209ENST00000555609 C22orf23Q9BZE7 217 aa20.41■□□□□ 0.86
TUBB3-209ENST00000555609 STAG3Q9UJ98 1225 aa20.41■□□□□ 0.86
TUBB3-209ENST00000555609 NFE2L2Q16236 605 aa20.4■□□□□ 0.86
TUBB3-209ENST00000555609 IL27Q8NEV9 243 aa20.4■□□□□ 0.86
TUBB3-209ENST00000555609 POLKQ9UBT6 870 aa20.4■□□□□ 0.86
TUBB3-209ENST00000555609 LRRC7Q96NW7 1537 aa20.4■□□□□ 0.86
TUBB3-209ENST00000555609 AATKQ6ZMQ8 1374 aa20.4■□□□□ 0.86
TUBB3-209ENST00000555609 NUCB1Q02818 461 aa20.39■□□□□ 0.86
TUBB3-209ENST00000555609 PIK3R4Q99570 1358 aa20.39■□□□□ 0.85
TUBB3-209ENST00000555609 SPATA31D1Q6ZQQ2 1576 aa20.39■□□□□ 0.85
TUBB3-209ENST00000555609 EDC4Q6P2E9 1401 aaKnown RBP20.39■□□□□ 0.85
TUBB3-209ENST00000555609 SIRT1Q96EB6 747 aa20.39■□□□□ 0.85
TUBB3-209ENST00000555609 IFT57Q9NWB7 429 aa20.38■□□□□ 0.85
TUBB3-209ENST00000555609 A2ML1A8K2U0 1454 aa20.38■□□□□ 0.85
TUBB3-209ENST00000555609 CPSF1Q10570 1443 aaKnown RBP20.38■□□□□ 0.85
TUBB3-209ENST00000555609 GNAI1P63096 354 aa20.37■□□□□ 0.85
TUBB3-209ENST00000555609 LMOD3Q0VAK6 560 aa20.37■□□□□ 0.85
TUBB3-209ENST00000555609 FBXO31Q5XUX0 539 aaPredicted RBP20.37■□□□□ 0.85
TUBB3-209ENST00000555609 PRKAR2BP31323 418 aa20.37■□□□□ 0.85
TUBB3-209ENST00000555609 PLPPR3Q6T4P5 718 aa20.37■□□□□ 0.85
TUBB3-209ENST00000555609 GCC1Q96CN9 775 aa20.37■□□□□ 0.85
TUBB3-209ENST00000555609 RIMS2Q9UQ26 1411 aa20.36■□□□□ 0.85
TUBB3-209ENST00000555609 CDK12Q9NYV4 1490 aaPredicted RBP20.36■□□□□ 0.85
TUBB3-209ENST00000555609 EIF5BO60841 1220 aaKnown RBP20.36■□□□□ 0.85
TUBB3-209ENST00000555609 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.36■□□□□ 0.85
TUBB3-209ENST00000555609 PTCH1Q13635 1447 aa20.36■□□□□ 0.85
TUBB3-209ENST00000555609 SETD1AO15047 1707 aaKnown RBP20.35■□□□□ 0.85
TUBB3-209ENST00000555609 L1TD1Q5T7N2 865 aaKnown RBP20.35■□□□□ 0.85
TUBB3-209ENST00000555609 SLKQ9H2G2 1235 aaPredicted RBP20.35■□□□□ 0.85
TUBB3-209ENST00000555609 KIF24Q5T7B8 1368 aa20.34■□□□□ 0.85
TUBB3-209ENST00000555609 CHMP5Q9NZZ3 219 aa20.34■□□□□ 0.85
TUBB3-209ENST00000555609 VAMP4O75379 141 aa20.33■□□□□ 0.85
TUBB3-209ENST00000555609 ZNF853P0CG23 659 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms